Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCATTCCGCCGCTTCTATACCTATTTTCCATCGAGATATCAAGTCTTCGAACATACTTTTGGATCATAACTACAATGCAAAAGTGTCTGATTTTGGGACATCGAGGTTCGTGCCTTACGATCAATCTCATTTAACTACAAAAGTGCAAGGAACGTTTGGCTATATCGATCCTGAGTATTTTCGATCGAGTCAATTAACTGAAAAGAGCGATGTGTATAGTTTTGGAGTTTTGATGGTGGAGCTTTTGACGGGAAAACAGCCGTTTAATTTTCTTTTGCACAAGATGAGGGTAAGAATCTATTGGAGTACTTCATTTCATTGGAAAAGGACAATCAACTTATTGAAATTCTTGATGGTGTAGTAGTGAGAGAGGCAAAGATAGAGGATGTTAGTTATGTTGCAAAACTAGCCATTAGATGTTTGAGATTGAATGGGAAAAGAAGGCCTACTATGAAACAAGTATTTTTGGAACTAGAAGGATTGAGGAAGTCTCAAGATTGTCTAGATCAATTTGTTGAAGAAAATCAATCAAGTGGGAGTTTTACTATTCCCATTAATGCAAGTAGTAGCTATGAAGAGCTTACAGATGACAGTATTGTATCTCTAGAAATAGAAACACTGTAA
mRNA sequence
ATGCATTCCGCCGCTTCTATACCTATTTTCCATCGAGATATCAAGTCTTCGAACATACTTTTGGATCATAACTACAATGCAAAAGTGTCTGATTTTGGGACATCGAGGTTCGTGCCTTACGATCAATCTCATTTAACTACAAAAGTGCAAGGAACGTTTGGCTATATCGATCCTGAGTATTTTCGATCGAGTCAATTAACTGAAAAGAGCGATGTGTATAGTTTTGGAGTTTTGATGGTGGAGCTTTTGACGGGAAAACAGCCGTTTAATTTTCTTTTGCACAAGATGAGGATAGAGGATGTTAGTTATGTTGCAAAACTAGCCATTAGATGTTTGAGATTGAATGGGAAAAGAAGGCCTACTATGAAACAAGTATTTTTGGAACTAGAAGGATTGAGGAAGTCTCAAGATTGTCTAGATCAATTTGTTGAAGAAAATCAATCAAGTGGGAGTTTTACTATTCCCATTAATGCAAGTAGTAGCTATGAAGAGCTTACAGATGACAGTATTGTATCTCTAGAAATAGAAACACTGTAA
Coding sequence (CDS)
ATGCATTCCGCCGCTTCTATACCTATTTTCCATCGAGATATCAAGTCTTCGAACATACTTTTGGATCATAACTACAATGCAAAAGTGTCTGATTTTGGGACATCGAGGTTCGTGCCTTACGATCAATCTCATTTAACTACAAAAGTGCAAGGAACGTTTGGCTATATCGATCCTGAGTATTTTCGATCGAGTCAATTAACTGAAAAGAGCGATGTGTATAGTTTTGGAGTTTTGATGGTGGAGCTTTTGACGGGAAAACAGCCGTTTAATTTTCTTTTGCACAAGATGAGGATAGAGGATGTTAGTTATGTTGCAAAACTAGCCATTAGATGTTTGAGATTGAATGGGAAAAGAAGGCCTACTATGAAACAAGTATTTTTGGAACTAGAAGGATTGAGGAAGTCTCAAGATTGTCTAGATCAATTTGTTGAAGAAAATCAATCAAGTGGGAGTTTTACTATTCCCATTAATGCAAGTAGTAGCTATGAAGAGCTTACAGATGACAGTATTGTATCTCTAGAAATAGAAACACTGTAA
Protein sequence
MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEYFRSSQLTEKSDVYSFGVLMVELLTGKQPFNFLLHKMRIEDVSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKSQDCLDQFVEENQSSGSFTIPINASSSYEELTDDSIVSLEIETL
Homology
BLAST of Lag0021687 vs. NCBI nr
Match:
XP_022152076.1 (wall-associated receptor kinase-like 1 [Momordica charantia])
HSP 1 Score: 213.0 bits (541), Expect = 2.1e-51
Identity = 124/208 (59.62%), Postives = 143/208 (68.75%), Query Frame = 0
Query: 1 MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEY 60
MHSAASIPI+HRDIKS NILLD NY+AKVSDFGTSRFV DQSHLTTKV GTFGYIDPEY
Sbjct: 438 MHSAASIPIYHRDIKSLNILLDENYSAKVSDFGTSRFVSCDQSHLTTKVLGTFGYIDPEY 497
Query: 61 FRSSQLTEKSDVYSFGVLMVELLTGKQPFNFLLHKMR----------------------- 120
FRSSQ TEKSDVYSFGVLMVELLTGK P F R
Sbjct: 498 FRSSQYTEKSDVYSFGVLMVELLTGKLPVTFARDDGRNLLDYFISLEKANQLVEILDIIV 557
Query: 121 -----IEDVSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKSQDCLD--QFVEENQSSG 179
++ V+ VA LA +CLR NGK RPTMKQV+LELEGLRKS+DC D + V+ +S
Sbjct: 558 AAEESMDVVNSVATLATKCLRSNGKERPTMKQVYLELEGLRKSRDCPDISEDVQSIGTSS 617
BLAST of Lag0021687 vs. NCBI nr
Match:
XP_022152109.1 (lysM domain receptor-like kinase 4 [Momordica charantia])
HSP 1 Score: 210.7 bits (535), Expect = 1.0e-50
Identity = 114/192 (59.38%), Postives = 135/192 (70.31%), Query Frame = 0
Query: 1 MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEY 60
MHS SIPIFHRDIKSSNILLD NY+AKVSDFGTSRFVP +QSHLTT VQGTFGY+DPEY
Sbjct: 598 MHSTTSIPIFHRDIKSSNILLDDNYSAKVSDFGTSRFVPCNQSHLTTSVQGTFGYMDPEY 657
Query: 61 FRSSQLTEKSDVYSFGVLMVELLTGKQPFNF----------------------------L 120
FRSS+ T+KSDVYSFGVL+VELLTGKQPF+F L
Sbjct: 658 FRSSKFTDKSDVYSFGVLIVELLTGKQPFSFARDEGKNLLEHFISMDKENQVTNLLDDEL 717
Query: 121 LHKMRIEDVSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKSQDCLDQFVEENQSSGSF 165
+ ++ + VAK+A +CLRLNGK+RPTMKQV LELEGLRKS+D + VEE +S F
Sbjct: 718 DREENMDVILSVAKIATKCLRLNGKKRPTMKQVLLELEGLRKSRDICLEIVEECESLRLF 777
BLAST of Lag0021687 vs. NCBI nr
Match:
XP_022152100.1 (wall-associated receptor kinase-like 1 isoform X2 [Momordica charantia])
HSP 1 Score: 209.1 bits (531), Expect = 3.0e-50
Identity = 121/205 (59.02%), Postives = 142/205 (69.27%), Query Frame = 0
Query: 1 MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEY 60
MHSAASIPI+HRDIKS NILLD N++AKVSDFGTSRFV DQSHLTTKV GTFGYIDPEY
Sbjct: 261 MHSAASIPIYHRDIKSLNILLDDNFSAKVSDFGTSRFVSCDQSHLTTKVLGTFGYIDPEY 320
Query: 61 FRSSQLTEKSDVYSFGVLMVELLTGKQPFNFLLHKMR----------------------- 120
FRSSQ TEKSDVYSFGVL+VELLTGK P +F R
Sbjct: 321 FRSSQYTEKSDVYSFGVLVVELLTGKLPVSFARDDGRNLLDHFISLVKTDQLIEILDFIV 380
Query: 121 -----IEDVSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKSQDC--LDQFVEENQSSG 175
++ V++VA LA +CLR NGK RPTMKQV+LELEGLRKSQDC + + V+ ++S
Sbjct: 381 ATEEIMDVVNHVATLATKCLRSNGKERPTMKQVYLELEGLRKSQDCPEISEEVQSIRTSS 440
BLAST of Lag0021687 vs. NCBI nr
Match:
XP_022152099.1 (putative wall-associated receptor kinase-like 16 isoform X1 [Momordica charantia])
HSP 1 Score: 209.1 bits (531), Expect = 3.0e-50
Identity = 121/205 (59.02%), Postives = 142/205 (69.27%), Query Frame = 0
Query: 1 MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEY 60
MHSAASIPI+HRDIKS NILLD N++AKVSDFGTSRFV DQSHLTTKV GTFGYIDPEY
Sbjct: 396 MHSAASIPIYHRDIKSLNILLDDNFSAKVSDFGTSRFVSCDQSHLTTKVLGTFGYIDPEY 455
Query: 61 FRSSQLTEKSDVYSFGVLMVELLTGKQPFNFLLHKMR----------------------- 120
FRSSQ TEKSDVYSFGVL+VELLTGK P +F R
Sbjct: 456 FRSSQYTEKSDVYSFGVLVVELLTGKLPVSFARDDGRNLLDHFISLVKTDQLIEILDFIV 515
Query: 121 -----IEDVSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKSQDC--LDQFVEENQSSG 175
++ V++VA LA +CLR NGK RPTMKQV+LELEGLRKSQDC + + V+ ++S
Sbjct: 516 ATEEIMDVVNHVATLATKCLRSNGKERPTMKQVYLELEGLRKSQDCPEISEEVQSIRTSS 575
BLAST of Lag0021687 vs. NCBI nr
Match:
XP_021818351.1 (wall-associated receptor kinase-like 1 isoform X1 [Prunus avium])
HSP 1 Score: 208.8 bits (530), Expect = 4.0e-50
Identity = 111/206 (53.88%), Postives = 143/206 (69.42%), Query Frame = 0
Query: 1 MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEY 60
MHSAASIPIFHRDIKSSNILLDHNY+AKVSDFGTS+ VP D++HLTT+VQGTFGY+DPEY
Sbjct: 455 MHSAASIPIFHRDIKSSNILLDHNYSAKVSDFGTSKSVPLDKTHLTTEVQGTFGYMDPEY 514
Query: 61 FRSSQLTEKSDVYSFGVLMVELLTGKQPFNF----------------------------L 120
F+SS+ T+KSD YSFGV +VE+LTGK PF+F +
Sbjct: 515 FQSSKFTDKSDTYSFGVTLVEILTGKTPFSFAKDDGENLVASFISLTRENQLVQILDPQV 574
Query: 121 LHKMRIEDVSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKSQDCLDQFVEENQSSGSF 178
+ + +E V +A+LA RCLRLNGK+RP+MK+V ELEGLR +Q CL++F E
Sbjct: 575 VREAEMEHVGAIAELATRCLRLNGKKRPSMKEVSTELEGLRNTQRCLEKFQEPQSFKDET 634
BLAST of Lag0021687 vs. ExPASy Swiss-Prot
Match:
Q8RY17 (Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana OX=3702 GN=WAKL22 PE=2 SV=1)
HSP 1 Score: 169.1 bits (427), Expect = 4.6e-41
Identity = 90/191 (47.12%), Postives = 122/191 (63.87%), Query Frame = 0
Query: 1 MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEY 60
+HSAAS P++HRD+K++NILLD Y AKVSDFGTSR + DQ+HLTT V GTFGY+DPEY
Sbjct: 534 LHSAASTPVYHRDVKTTNILLDEKYRAKVSDFGTSRSINVDQTHLTTLVAGTFGYLDPEY 593
Query: 61 FRSSQLTEKSDVYSFGVLMVELLTGKQPFNFLLHK------------------------- 120
F++SQ T+KSDVYSFGV++VEL+TG++PF+ + +
Sbjct: 594 FQTSQFTDKSDVYSFGVVLVELITGEKPFSVMRPEENRGLVSHFNEAMKQNRVLDIVDSR 653
Query: 121 ----MRIEDVSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKSQDCLDQFVEENQSSGS 163
+E V VAKLA RCL L GK+RP M++V +ELE +R S + L+ +EE +
Sbjct: 654 IKEGCTLEQVLAVAKLARRCLSLKGKKRPNMREVSVELERIRSSPEDLELHIEE-EDEEE 713
BLAST of Lag0021687 vs. ExPASy Swiss-Prot
Match:
Q9S9M5 (Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana OX=3702 GN=WAKL1 PE=2 SV=1)
HSP 1 Score: 165.6 bits (418), Expect = 5.0e-40
Identity = 93/186 (50.00%), Postives = 112/186 (60.22%), Query Frame = 0
Query: 1 MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEY 60
MHSAAS PIFHRDIK++NILLD Y AKVSDFGTSR V DQ+HLTT V GTFGY+DPEY
Sbjct: 542 MHSAASFPIFHRDIKTTNILLDEKYRAKVSDFGTSRSVTLDQTHLTTLVAGTFGYMDPEY 601
Query: 61 FRSSQLTEKSDVYSFGVLMVELLTGKQPFN-----------------------------F 120
F SSQ T KSDVYSFGV++VEL+TG++P +
Sbjct: 602 FLSSQYTHKSDVYSFGVVLVELITGEKPLSRVRSEEGRGLATHFLEAMKENRVIDIIDIR 661
Query: 121 LLHKMRIEDVSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKSQDCLDQFVEENQSSGS 158
+ + ++E V VAKLA +CL GK RP MK+V ELE +R S + LD E
Sbjct: 662 IKDESKLEQVMAVAKLARKCLNRKGKNRPNMKEVSNELERIRSSPEDLDVRTENEDEEED 721
BLAST of Lag0021687 vs. ExPASy Swiss-Prot
Match:
Q9S9M3 (Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana OX=3702 GN=WAKL3 PE=2 SV=2)
HSP 1 Score: 164.1 bits (414), Expect = 1.5e-39
Identity = 92/174 (52.87%), Postives = 112/174 (64.37%), Query Frame = 0
Query: 1 MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEY 60
MHSAAS PIFHRDIK++NILLD Y AK+SDFGTSR V DQ+HLTT V GTFGY+DPEY
Sbjct: 541 MHSAASFPIFHRDIKTTNILLDEKYRAKISDFGTSRSVATDQTHLTTLVAGTFGYMDPEY 600
Query: 61 FRSSQLTEKSDVYSFGVLMVELLTGKQPFN------------FLLHKM-----------R 120
F SSQ T KSDVYSFGV++VEL+TG++P + + L M R
Sbjct: 601 FLSSQYTHKSDVYSFGVVLVELITGEKPMSRVRSEEGIGLATYFLEAMKENRAVDIIDIR 660
Query: 121 IED----VSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKSQDCLDQFVEENQ 148
I+D V VAKLA RCL G +RP M++V ++LE +R S LD E +
Sbjct: 661 IKDESKQVMAVAKLARRCLNRKGNKRPNMREVSIKLERIRSSPKDLDVHTENEE 714
BLAST of Lag0021687 vs. ExPASy Swiss-Prot
Match:
Q9S9M2 (Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana OX=3702 GN=WAKL4 PE=2 SV=2)
HSP 1 Score: 162.9 bits (411), Expect = 3.3e-39
Identity = 86/164 (52.44%), Postives = 108/164 (65.85%), Query Frame = 0
Query: 1 MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEY 60
+HSAAS PI+HRDIK++NILLD Y KVSDFGTSR V DQ+HLTT+V GTFGY+DPEY
Sbjct: 537 LHSAASFPIYHRDIKTTNILLDEKYQVKVSDFGTSRSVTIDQTHLTTQVAGTFGYVDPEY 596
Query: 61 FRSSQLTEKSDVYSFGVLMVELLTGKQPFN---------FLLH----------------- 120
F+SS+ T+KSDVYSFGV++VEL+TGK P + F H
Sbjct: 597 FQSSKFTDKSDVYSFGVVLVELITGKNPSSRVQSEENRGFAAHFVAAVKENRFLDIVDER 656
Query: 121 ---KMRIEDVSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKS 136
+ ++ V VAKLA RCL GK+RP M++V +ELE +R S
Sbjct: 657 IKDECNLDQVMAVAKLAKRCLNRKGKKRPNMREVSVELERIRSS 700
BLAST of Lag0021687 vs. ExPASy Swiss-Prot
Match:
Q9S9M1 (Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana OX=3702 GN=WAKL5 PE=2 SV=2)
HSP 1 Score: 161.0 bits (406), Expect = 1.2e-38
Identity = 85/175 (48.57%), Postives = 112/175 (64.00%), Query Frame = 0
Query: 1 MHSAASIPIFHRDIKSSNILLDHNYNAKVSDFGTSRFVPYDQSHLTTKVQGTFGYIDPEY 60
MHSAAS PI+HRDIK++NILLD Y AKVSDFGTSR V DQ+HLTT V GTFGY+DPEY
Sbjct: 545 MHSAASFPIYHRDIKTTNILLDEKYGAKVSDFGTSRSVTIDQTHLTTMVAGTFGYMDPEY 604
Query: 61 FRSSQLTEKSDVYSFGVLMVELLTGKQPFN-----------------------------F 120
F SSQ T+KSDVYSFGV++VEL+TG++P +
Sbjct: 605 FLSSQYTDKSDVYSFGVVLVELITGEKPLSRIRSEEGRGLATHFLEAMKENRVIDIIDIR 664
Query: 121 LLHKMRIEDVSYVAKLAIRCLRLNGKRRPTMKQVFLELEGLRKSQDCLDQFVEEN 147
+ + +++ + VAKLA +CL G +RP M++ LELE +R S + L+ +E +
Sbjct: 665 IKEESKLDQLMAVAKLARKCLSRKGIKRPNMREASLELERIRSSPEDLEAHIEND 719
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022152076.1 | 2.1e-51 | 59.62 | wall-associated receptor kinase-like 1 [Momordica charantia] | [more] |
XP_022152109.1 | 1.0e-50 | 59.38 | lysM domain receptor-like kinase 4 [Momordica charantia] | [more] |
XP_022152100.1 | 3.0e-50 | 59.02 | wall-associated receptor kinase-like 1 isoform X2 [Momordica charantia] | [more] |
XP_022152099.1 | 3.0e-50 | 59.02 | putative wall-associated receptor kinase-like 16 isoform X1 [Momordica charantia... | [more] |
XP_021818351.1 | 4.0e-50 | 53.88 | wall-associated receptor kinase-like 1 isoform X1 [Prunus avium] | [more] |
Match Name | E-value | Identity | Description | |
Q8RY17 | 4.6e-41 | 47.12 | Wall-associated receptor kinase-like 22 OS=Arabidopsis thaliana OX=3702 GN=WAKL2... | [more] |
Q9S9M5 | 5.0e-40 | 50.00 | Wall-associated receptor kinase-like 1 OS=Arabidopsis thaliana OX=3702 GN=WAKL1 ... | [more] |
Q9S9M3 | 1.5e-39 | 52.87 | Wall-associated receptor kinase-like 3 OS=Arabidopsis thaliana OX=3702 GN=WAKL3 ... | [more] |
Q9S9M2 | 3.3e-39 | 52.44 | Wall-associated receptor kinase-like 4 OS=Arabidopsis thaliana OX=3702 GN=WAKL4 ... | [more] |
Q9S9M1 | 1.2e-38 | 48.57 | Wall-associated receptor kinase-like 5 OS=Arabidopsis thaliana OX=3702 GN=WAKL5 ... | [more] |