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Lag0021629 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGGCCTCGACCCAAGGCCTTGGCCAACCACTCGACCGAGTTCGTTTGCCTCCGCTCGGTCCCAACTGCCTCTAGCTGTCCTGGTTCCGTCTGGTTCGTCTCGAAACGCCTCCGAATTTCTAAAAACCCTAGGAGTATGAGCAAGTATTTATATCCCTCTTCGCCACTGAAGAAGGGGATCCGAACTCTCGACTCTCTCCTCTTACTCTCTTGCTCTCCTCTTCCGTTTTCTGACTTAAGCATCGGAGGCGGTGTGGCTAACACCACACTGATGTGCAGGTTTTCTGTCTCGCAAACCACGTTTTCCCCCCTCTCAAACAAATTTACTGTTGGTGGCACGTGAAGGTCATGTGAGTTCTCTCGACCAAATTTGACCATCAACAAAGATGATAATAATATAATTTTAAAAGTATTAAAAGCAGAATTTAAATTAAAGCAAGAAGAATTAAAATTGTAATTTAATTATTAATACTTTATTTTGTTAATCATGTGGCTTTAACTTTCCCATGCAAGTGGTCTACTTTGATGGGGATCTGATTCTAAATCAAAATCATGTCTATGGTACATAGCCACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAATTTAAAATAAAGCAATTTATCCATAAAAATTGAAATAAAATTTATTTCTTTATCATAAAGAGGCTGCTAAGGGTAGGGCAGCAGCCTTGTACTAAGGTCCAACATCCCTCATAAAGATTATTTTGACTAATAAAGTTTGAATAAACAAAGTGAATCATTGTTTCAAAATCTTTTTCTTTATTCTTTTTTTAGAAAAGTTAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTATAAATTGGAACCCTAATTCCCAATGCTTTTTGGGTTTGTTTATGTTTGGGAATTGGGGCACAAAAGTTGAGAGTTTAGATATTCTTATTGTAAAAATTGTTTAGAGATTTGGATGAAATGATGGTTTCAACTAATGGCCCATAGAAAATAGTGTCTTATGATGTCAAGATTGTGCTTTTTTCTTTTAGAATTTTTTTTGGATATTTTTTTAAAAACATTTTGAAGTTATTTTGTAGGTGAAAGAATTGGAATTCGTCGATTTAATATAAACTGATTGTATACCACCACTGATAAACACCAGAATAAACAATATTCATTGGGACAAGAGCACCCCTCGAATACTAGTTTCAATGGCAGATGGACCAAAATGTGGATCCCAAATTACATGAGCAATAAGTCTTACATGTAAAGGATCATGTATCCATACTTCAAAATAAAATCACACATTATAACGATAGAGAAGTTGGAAAAAGTCATAGACACCCATTAAGAATGCATTTTTAAAAAAACATTTTGTATAAAAATTGTTTGGAATTTAAAGATTTATATGTTTGGTTACATTTCTTCATATGTATTTTTATACACAAATTATTGTATACTAAACACTTTAAAAAAAAAGTTGGTTTCAAGTGTTTCTCTCAAAATGATTTATTTATTTTGAATAAGTCATTTTTAATAGTTGCCAAACACTAGAAATTTTTTCAAAATGATTTTTTTTTTTCAAAATTAAACACTTGAAAAGTTAAACCAAACAAACCCTTAATATCCCGTACAAAATGTGACTAGCTAGTATCGAAGAGAATATGCATGTATTTATAAAGTTCATAAGAGAGTTTGACATAACTAAAACAAAGATATCATAAAATTTAGGTTTGAGTATTTGATTTTTTAAAAAATTAAATCTATAAACACTATTACCATTCATAAGTTTATTTGTTTCGCCATCTACCTTCTTCCTATGTTTTCAAAAACCAAGTCAAGTTTTTAAAATTAAAAAAAAAAGTAAATTTAAAAAACTTGTTTTTGTTTTTGAATTTTGACTAAAAATTCAAGTGTGTGCTAACAAAAATGAAAATCCCGGTAAAAAAAATTGGAAGAAAATTACAACCATAATTGTTAAAAACCAAAAACTAATTAGGCTCTGTTTGATAACCATTTGGTTGTTGAAAAATTATGTTTGTTTTCTCCCAACTTCCTTACCATGGTTTTTATTTTTGTTAAGCACACATTTAAATTTTTGAAAATTATCTTTTATCGATTTTTAAAATTTGACTTGATTTTTGAAACCATGAGAAAATAGTAGATGACGAAACCAATTAACTTATGAGTTTTTTTTTTTTTTTTTTTTTTTTAGGAGATTAACTTATGAGTGGTTGTAGTGTGTTTATATAGGCTTAATTTTCAAAAATCAAATGGTTATCAAACGGGCCTAATTATTAACCCATAATCTAAATGTTTAAAGCAATTTACATTTAGCTCAATTGTTAAGGTTGATGGTCACACGTTTGGATTTGTTGTTTAAATTTGTCAACGTCTATGGCCAAGCAAAAATGTACGACATGAGCTGATTGCTAAAAAGGGAGAGAGATTTCACGTGCATTGAATTTAGTGGGGGGCAGTGGCCATGAAGAAAAATGTCCAATACAAATCAAAGTTGGAGATAATTATTATTCTTGTTGTGACATATTTAGAGAAATTGAGATGAATGATGTGACTAAATGGCCCATTGAAAATAGTGTTTTGTTGTCCACATTGTGATATTTATTATTATTATTATTATCATTTTAAAGTTATGATTACACAAATTGATGTAAGATGACTAACATCTACATTTTCGAATTGAAAAGTAGCAAAAAAAAAAAAAAAAAAAACTTTTTAGTTATAAAGTTTCTAGTATTATTATGTCGATCACGAAATATTTCATTGAGTTATATTCAGAGAGGAGAAAAAACTCATTAATTATATGAATGAATACGACACATTAATTACTTGCATGATAGTAAGATGTTTTAGAAGTTCCATATCAATTGTGTATTTTGTTTGTCAATATTAGCTTGTATAACTCAGATTATGAAATCTTAATCTCACTACAAGAAAAACAGTCTCTCCCGATGCCAAAAAGTGTCGGGAGAAACGCCAAAACGCGTCGGGAAAACCTCTCCCGACGCTAAACAATACGTCGACAAGATCGTAGGGAGATCCTGGTCGGGACTTGATCTCCCGACACTAAAACCGTGACCGTCGGCATTTCCAATAAACTCCCGATGATAGTGTTTGTCCGAAAACTCCCAGCGCACTTTTATTAAGCGTCGGGAGATACGGTATCTGTAGCAGCCAGATTTAGAAAAAAAAAAAGAAAAAAAAGGGGAAAAGGTGGGCATGAGCCCGGTCAAAAAGGAAAAAAAAAGGGAAAAATGGGGGGAAATTTCCCCCCAATTCTGTCAGATTGACCGTGTAAAAAAAAAAAAATCCTGAATTTTCTCTTTCCCTCATGTTCATCTCCCTCTCTCGGCACTCTCTCTCTCTCTCTTTCGGTACCCTCTCTCTCGCTCCCTCTCAGCCCGCAGTGCCGCCCGCCGCAAGGCAAATGTGGTTGCAGATGCCCTCAGCAGGAAGACCGCTCATGCGTTTGTTTTGATTACTACTCAGGCTCATATATTGGATGACTTGGAACGTGCAGAGATTATGATTGCAGTGGGCGAAGTTACAGCACGCCTAGCTCAGTTGACAGTTAAGTCGAGCTTGAGACAGAGGATCATAGATGAACAACCAAATGACCCTGACCTTGTTGTTAAACGCAGTCAAGTAGAGGCGGGACAGGGGAACGAGTTTTCCTTATCTTCAGACCTCGGCTTGTGTTACCAGGGTCGCTTATGCGTACCTGGGAATGCCGATCTCAAGCAGGAATTATTAGTAGAGGCACATAATTCACCTTTTTCAATCCATCCAGGAAGTACGAAGATGTACCATGATTTGAAACAGTATTACTGGTGGCAGGACATGAAAAGAGAGATAGCGGATTTTGTCAGTAAATGCCTTGTCTGCCAACAGGTGAAAGCCCCGAGACAGAAACCAGCAGGCTTGTTGCAGCCGCTGAGTGTCCCAGAATGGAAGTGGGAGCATATATCTATGGACTTCATCACAGGATTGCCTAGAACGGCCAAGGGTTACACCGTGATTTGGGTCATTATCGACAGACTCACCAAGTCAGCGCACTTTCTCCCTGGAAAGCCTACTTACACTGTTGAGAAGTGGGCACAGTTATACATGACGGAGATAGTCAAGCTTCATGGGGTGCCGGTATCAATCGTGTCAGATAGAGACCCTCGGTTCACATCTAATTTTGGAGGAGTTTGCAAAGAGCCTTGGGTACTCAGTTGCGTTTCAGTACAGCTTTTCACCCCCAGACAGATGGTCAGACTGAGCGATTGA ATGGTCGGCCTCGACCCAAGGCCTTGGCCAACCACTCGACCGAGTTCGTTTGCCTCCGCTCGGTCCCAACTGCCTCTAGCTGTCCTGGTTCCGTCTGCCCGCAGTGCCGCCCGCCGCAAGGCAAATGTGGTTGCAGATGCCCTCAGCAGGAAGACCGCTCATGCGTTTGTTTTGATTACTACTCAGGCTCATATATTGGATGACTTGGAACGTGCAGAGATTATGATTGCAGTGGGCGAAGTTACAGCACGCCTAGCTCAGTTGACAGTTAAGTCGAGCTTGAGACAGAGGATCATAGATGAACAACCAAATGACCCTGACCTTGTTGTTAAACGCAGTCAAGTAGAGGCGGGACAGGGGAACGAGTTTTCCTTATCTTCAGACCTCGGCTTGTGTTACCAGGGTCGCTTATGCGTACCTGGGAATGCCGATCTCAAGCAGGAATTATTAGTAGAGGCACATAATTCACCTTTTTCAATCCATCCAGGAAGTACGAAGATGTACCATGATTTGAAACAGTATTACTGGTGGCAGGACATGAAAAGAGAGATAGCGGATTTTGTCAGTAAATGCCTTGTCTGCCAACAGGTGAAAGCCCCGAGACAGAAACCAGCAGGCTTGTTGCAGCCGCTGAGTGTCCCAGAATGGAAGTGGGAGCATATATCTATGGACTTCATCACAGGATTGCCTAGAACGGCCAAGGGTTACACCGTGATTTGGGTCATTATCGACAGACTCACCAAGTCAGCGCACTTTCTCCCTGGAAAGCCTACTTACACTGTTGAGAAGTGGGCACAGTTATACATGACGGAGATAGTCAAGCTTCATGGGGTGCCGGTATCAATCGTGTCAGATAGAGACCCTCGGTTCACATCTAATTTTGGAGGAGTTTGCAAAGAGCCTTGGGTACTCAGTTGCGTTTCAGTACAGCTTTTCACCCCCAGACAGATGGTCAGACTGAGCGATTGA ATGGTCGGCCTCGACCCAAGGCCTTGGCCAACCACTCGACCGAGTTCGTTTGCCTCCGCTCGGTCCCAACTGCCTCTAGCTGTCCTGGTTCCGTCTGCCCGCAGTGCCGCCCGCCGCAAGGCAAATGTGGTTGCAGATGCCCTCAGCAGGAAGACCGCTCATGCGTTTGTTTTGATTACTACTCAGGCTCATATATTGGATGACTTGGAACGTGCAGAGATTATGATTGCAGTGGGCGAAGTTACAGCACGCCTAGCTCAGTTGACAGTTAAGTCGAGCTTGAGACAGAGGATCATAGATGAACAACCAAATGACCCTGACCTTGTTGTTAAACGCAGTCAAGTAGAGGCGGGACAGGGGAACGAGTTTTCCTTATCTTCAGACCTCGGCTTGTGTTACCAGGGTCGCTTATGCGTACCTGGGAATGCCGATCTCAAGCAGGAATTATTAGTAGAGGCACATAATTCACCTTTTTCAATCCATCCAGGAAGTACGAAGATGTACCATGATTTGAAACAGTATTACTGGTGGCAGGACATGAAAAGAGAGATAGCGGATTTTGTCAGTAAATGCCTTGTCTGCCAACAGGTGAAAGCCCCGAGACAGAAACCAGCAGGCTTGTTGCAGCCGCTGAGTGTCCCAGAATGGAAGTGGGAGCATATATCTATGGACTTCATCACAGGATTGCCTAGAACGGCCAAGGGTTACACCGTGATTTGGGTCATTATCGACAGACTCACCAAGTCAGCGCACTTTCTCCCTGGAAAGCCTACTTACACTGTTGAGAAGTGGGCACAGTTATACATGACGGAGATAGTCAAGCTTCATGGGGTGCCGGTATCAATCGTGTCAGATAGAGACCCTCGGTTCACATCTAATTTTGGAGGAGTTTGCAAAGAGCCTTGGGTACTCAGTTGCGTTTCAGTACAGCTTTTCACCCCCAGACAGATGGTCAGACTGAGCGATTGA MVGLDPRPWPTTRPSSFASARSQLPLAVLVPSARSAARRKANVVADALSRKTAHAFVLITTQAHILDDLERAEIMIAVGEVTARLAQLTVKSSLRQRIIDEQPNDPDLVVKRSQVEAGQGNEFSLSSDLGLCYQGRLCVPGNADLKQELLVEAHNSPFSIHPGSTKMYHDLKQYYWWQDMKREIADFVSKCLVCQQVKAPRQKPAGLLQPLSVPEWKWEHISMDFITGLPRTAKGYTVIWVIIDRLTKSAHFLPGKPTYTVEKWAQLYMTEIVKLHGVPVSIVSDRDPRFTSNFGGVCKEPWVLSCVSVQLFTPRQMVRLSD Homology
BLAST of Lag0021629 vs. NCBI nr
Match: KAA0051357.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 397.9 bits (1021), Expect = 8.3e-107 Identity = 190/255 (74.51%), Postives = 220/255 (86.27%), Query Frame = 0
BLAST of Lag0021629 vs. NCBI nr
Match: KAA0035938.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 396.4 bits (1017), Expect = 2.4e-106 Identity = 189/255 (74.12%), Postives = 219/255 (85.88%), Query Frame = 0
BLAST of Lag0021629 vs. NCBI nr
Match: KAA0043669.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 396.4 bits (1017), Expect = 2.4e-106 Identity = 189/255 (74.12%), Postives = 221/255 (86.67%), Query Frame = 0
BLAST of Lag0021629 vs. NCBI nr
Match: KAA0058399.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 396.0 bits (1016), Expect = 3.2e-106 Identity = 188/255 (73.73%), Postives = 220/255 (86.27%), Query Frame = 0
BLAST of Lag0021629 vs. NCBI nr
Match: TYK01613.1 (pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 396.0 bits (1016), Expect = 3.2e-106 Identity = 190/255 (74.51%), Postives = 220/255 (86.27%), Query Frame = 0
BLAST of Lag0021629 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.5e-26 Identity = 69/252 (27.38%), Postives = 125/252 (49.60%), Query Frame = 0
BLAST of Lag0021629 vs. ExPASy Swiss-Prot
Match: P0CT41 (Transposon Tf2-12 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-12 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.5e-26 Identity = 69/252 (27.38%), Postives = 125/252 (49.60%), Query Frame = 0
BLAST of Lag0021629 vs. ExPASy Swiss-Prot
Match: P0CT34 (Transposon Tf2-1 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-1 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.5e-26 Identity = 69/252 (27.38%), Postives = 125/252 (49.60%), Query Frame = 0
BLAST of Lag0021629 vs. ExPASy Swiss-Prot
Match: P0CT35 (Transposon Tf2-2 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-2 PE=3 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.5e-26 Identity = 69/252 (27.38%), Postives = 125/252 (49.60%), Query Frame = 0
BLAST of Lag0021629 vs. ExPASy Swiss-Prot
Match: P0CT36 (Transposon Tf2-3 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-3 PE=1 SV=1) HSP 1 Score: 119.4 bits (298), Expect = 7.5e-26 Identity = 69/252 (27.38%), Postives = 125/252 (49.60%), Query Frame = 0
BLAST of Lag0021629 vs. ExPASy TrEMBL
Match: A0A5A7UAA8 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold55G00800 PE=4 SV=1) HSP 1 Score: 397.9 bits (1021), Expect = 4.0e-107 Identity = 190/255 (74.51%), Postives = 220/255 (86.27%), Query Frame = 0
BLAST of Lag0021629 vs. ExPASy TrEMBL
Match: A0A5A7SZD6 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold56G001250 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 1.2e-106 Identity = 189/255 (74.12%), Postives = 219/255 (85.88%), Query Frame = 0
BLAST of Lag0021629 vs. ExPASy TrEMBL
Match: A0A5A7TR61 (Pol protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19461G00010 PE=4 SV=1) HSP 1 Score: 396.4 bits (1017), Expect = 1.2e-106 Identity = 189/255 (74.12%), Postives = 221/255 (86.67%), Query Frame = 0
BLAST of Lag0021629 vs. ExPASy TrEMBL
Match: A0A5A7T8B6 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold4066G00070 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.5e-106 Identity = 188/255 (73.73%), Postives = 220/255 (86.27%), Query Frame = 0
BLAST of Lag0021629 vs. ExPASy TrEMBL
Match: A0A5D3BPI1 (Reverse transcriptase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G002120 PE=4 SV=1) HSP 1 Score: 396.0 bits (1016), Expect = 1.5e-106 Identity = 190/255 (74.51%), Postives = 220/255 (86.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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