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Lag0021626 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGGGCCCTGGATGTAGCGACTTTGGCTGGAATGATGAATTTAAATGCATCGAGGCAGAGAAGGAAACATTTGACTTGTGGGTGAAGGTAAGAACGTGTCATTATGTTAACTTCTCATATTTTATGACTTCCTAACATAAACTTTTGGGTTAATGCAGGGGCATCCTATCGCAAAAGGCATGCGTAACAAGCCTTTCCTGCATTTTGAAGACTTGGCATATGTCTTTGGGAAGGATCGAGCCACGGGGAAGGTGTCAGAGGTGATGGGCGAGATGGGATCGAACATGCCAGATGATGAGGTAGACCTCAGTGCATCCCTAGAGAACGACACCCACATCCCGCCGTTCACCATGCCCACTGCGAACATGTCAGAGGATGAACCTCGGGGTACGCCAGGCAGTCAAAGTTGCCCAACTGGAAGGTCGTCACGTGGGAGCAAGAGGAAGAAGTCTGGGTCTGACACGCACATAGCAGAAATTGGCACCTCGTTTACAGAGCAACTGAAGTCAATTGCAGAGTGGCCTGAAAAAAACATGTCACAGAGGCTGACTTCCGAGATAAAATTGTCACCCACTTGA ATGTTGGGCCCTGGATGTAGCGACTTTGGCTGGAATGATGAATTTAAATGCATCGAGGCAGAGAAGGAAACATTTGACTTGTGGGTGAAGGGGCATCCTATCGCAAAAGGCATGCGTAACAAGCCTTTCCTGCATTTTGAAGACTTGGCATATGTCTTTGGGAAGGATCGAGCCACGGGGAAGGTGTCAGAGGTGATGGGCGAGATGGGATCGAACATGCCAGATGATGAGGTAGACCTCAGTGCATCCCTAGAGAACGACACCCACATCCCGCCGTTCACCATGCCCACTGCGAACATGTCAGAGGATGAACCTCGGGGTACGCCAGGCAGTCAAAGTTGCCCAACTGGAAGGTCGTCACGTGGGAGCAAGAGGAAGAAGTCTGGGTCTGACACGCACATAGCAGAAATTGGCACCTCGTTTACAGAGCAACTGAAGTCAATTGCAGAGTGGCCTGAAAAAAACATGTCACAGAGGCTGACTTCCGAGATAAAATTGTCACCCACTTGA ATGTTGGGCCCTGGATGTAGCGACTTTGGCTGGAATGATGAATTTAAATGCATCGAGGCAGAGAAGGAAACATTTGACTTGTGGGTGAAGGGGCATCCTATCGCAAAAGGCATGCGTAACAAGCCTTTCCTGCATTTTGAAGACTTGGCATATGTCTTTGGGAAGGATCGAGCCACGGGGAAGGTGTCAGAGGTGATGGGCGAGATGGGATCGAACATGCCAGATGATGAGGTAGACCTCAGTGCATCCCTAGAGAACGACACCCACATCCCGCCGTTCACCATGCCCACTGCGAACATGTCAGAGGATGAACCTCGGGGTACGCCAGGCAGTCAAAGTTGCCCAACTGGAAGGTCGTCACGTGGGAGCAAGAGGAAGAAGTCTGGGTCTGACACGCACATAGCAGAAATTGGCACCTCGTTTACAGAGCAACTGAAGTCAATTGCAGAGTGGCCTGAAAAAAACATGTCACAGAGGCTGACTTCCGAGATAAAATTGTCACCCACTTGA MLGPGCSDFGWNDEFKCIEAEKETFDLWVKGHPIAKGMRNKPFLHFEDLAYVFGKDRATGKVSEVMGEMGSNMPDDEVDLSASLENDTHIPPFTMPTANMSEDEPRGTPGSQSCPTGRSSRGSKRKKSGSDTHIAEIGTSFTEQLKSIAEWPEKNMSQRLTSEIKLSPT Homology
BLAST of Lag0021626 vs. NCBI nr
Match: KAA0035078.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK03601.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 137.5 bits (345), Expect = 1.1e-28 Identity = 70/161 (43.48%), Postives = 95/161 (59.01%), Query Frame = 0
BLAST of Lag0021626 vs. NCBI nr
Match: TYK26007.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 136.7 bits (343), Expect = 1.8e-28 Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 0
BLAST of Lag0021626 vs. NCBI nr
Match: KAA0067158.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 136.7 bits (343), Expect = 1.8e-28 Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 0
BLAST of Lag0021626 vs. NCBI nr
Match: TYK10915.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK15088.1 retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 135.6 bits (340), Expect = 4.0e-28 Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 0
BLAST of Lag0021626 vs. NCBI nr
Match: KAA0032766.1 (retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 135.6 bits (340), Expect = 4.0e-28 Identity = 71/161 (44.10%), Postives = 98/161 (60.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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