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Lag0021619 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAATAATAGAGCAATGAAGGTTGTGGCTTTGGCAGTGGTGTTGATGGCTGCTGTGATTGGTTTGGGTGAAGCTCAAACCATTTGCAACATGTCAGCTGCTGGTTTGATGGCATGTAGGCCGTCGGTGACGCCTCCGAACCCCCCGCCACCGAGCGCCATGTGTTGCATGGCGCTCTCGAGCGCCGACTTGCACTGTTTCTGCGCCTACCGGAACTCGGGAGCTCTTGCTTCTCTTGGCATTGACCCTAATCTTGCCATGAAGCTGCCTCAGAAATGCAGGCTTCCTAACTCTCCAAATTGCTAG ATGAATAATAGAGCAATGAAGGTTGTGGCTTTGGCAGTGGTGTTGATGGCTGCTGTGATTGGTTTGGGTGAAGCTCAAACCATTTGCAACATGTCAGCTGCTGGTTTGATGGCATGTAGGCCGTCGGTGACGCCTCCGAACCCCCCGCCACCGAGCGCCATGTGTTGCATGGCGCTCTCGAGCGCCGACTTGCACTGTTTCTGCGCCTACCGGAACTCGGGAGCTCTTGCTTCTCTTGGCATTGACCCTAATCTTGCCATGAAGCTGCCTCAGAAATGCAGGCTTCCTAACTCTCCAAATTGCTAG ATGAATAATAGAGCAATGAAGGTTGTGGCTTTGGCAGTGGTGTTGATGGCTGCTGTGATTGGTTTGGGTGAAGCTCAAACCATTTGCAACATGTCAGCTGCTGGTTTGATGGCATGTAGGCCGTCGGTGACGCCTCCGAACCCCCCGCCACCGAGCGCCATGTGTTGCATGGCGCTCTCGAGCGCCGACTTGCACTGTTTCTGCGCCTACCGGAACTCGGGAGCTCTTGCTTCTCTTGGCATTGACCCTAATCTTGCCATGAAGCTGCCTCAGAAATGCAGGCTTCCTAACTCTCCAAATTGCTAG MNNRAMKVVALAVVLMAAVIGLGEAQTICNMSAAGLMACRPSVTPPNPPPPSAMCCMALSSADLHCFCAYRNSGALASLGIDPNLAMKLPQKCRLPNSPNC Homology
BLAST of Lag0021619 vs. NCBI nr
Match: XP_022979997.1 (putative lipid-transfer protein DIR1 [Cucurbita maxima]) HSP 1 Score: 161.0 bits (406), Expect = 5.4e-36 Identity = 78/99 (78.79%), Postives = 88/99 (88.89%), Query Frame = 0
BLAST of Lag0021619 vs. NCBI nr
Match: XP_038898435.1 (putative lipid-transfer protein DIR1 [Benincasa hispida]) HSP 1 Score: 161.0 bits (406), Expect = 5.4e-36 Identity = 80/99 (80.81%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of Lag0021619 vs. NCBI nr
Match: XP_022955375.1 (putative lipid-transfer protein DIR1 [Cucurbita moschata] >XP_023526472.1 putative lipid-transfer protein DIR1 [Cucurbita pepo subsp. pepo] >KAG6582085.1 putative lipid-transfer protein DIR1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 160.6 bits (405), Expect = 7.0e-36 Identity = 78/99 (78.79%), Postives = 89/99 (89.90%), Query Frame = 0
BLAST of Lag0021619 vs. NCBI nr
Match: XP_022138173.1 (putative lipid-transfer protein DIR1 [Momordica charantia]) HSP 1 Score: 156.4 bits (394), Expect = 1.3e-34 Identity = 77/99 (77.78%), Postives = 86/99 (86.87%), Query Frame = 0
BLAST of Lag0021619 vs. NCBI nr
Match: KAA0044634.1 (putative lipid-transfer protein DIR1 [Cucumis melo var. makuwa]) HSP 1 Score: 146.0 bits (367), Expect = 1.8e-31 Identity = 72/100 (72.00%), Postives = 83/100 (83.00%), Query Frame = 0
BLAST of Lag0021619 vs. ExPASy Swiss-Prot
Match: Q8W453 (Putative lipid-transfer protein DIR1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=1 SV=1) HSP 1 Score: 84.0 bits (206), Expect = 1.1e-15 Identity = 42/100 (42.00%), Postives = 58/100 (58.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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