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Lag0021605 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCACGTCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGTGAAGCCAAATCTCATTATCTTGACCAATCCTGCAAATGAAGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTGTCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAAAAATCTTGAACTACGTTATGACTTGATCCCTTTTCTTCAAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCTCTGCAAACAAAAAAAAGGAAAGTGCAAGAAATATTGAAGCACGACGATATAAATTGAGGAAATTCATCACTAGTGGGGGCAACACAGCGAATGGAAGTTGCTTCCTCCAAGTTCGAAGGTTCCCACGCGCTTCGCTGCAGTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGTTTCACTGCAGTTCTTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCACTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTTTCGCTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAAGTTCGAAGGTTCTCACGCGCTGCGCTGCAGTTCCTTCCTCAAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTTCTCCAAGTTTGAAGGTTCTCACGCACTTCGTTGCAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTGTTGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCGCTCATGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAGTTCGAAGGTTCTCACGTGTTTCGCTGCATTTCCTTCCCCCAATTCGAAGGTTCTCACGCGTCGCTTCGCTGCGCTCATGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTTCTTCCCCAAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGATTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCATTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACGCTACGCTGCTTCCTTCTCCAAGTTCGAGGGTCCTCATGCTACGCTCGGCTACATTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGAAAAGGGCATGGCGGCGACACAAGTCCAAGGACATGTCCCAAAGCGAGGAACATGTCCCTGTACTCGTGCTGAAAGGCGCGACGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGACCGTGCACTCGTGCTGA ATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCACGTCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTGTCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGCGAATGGAAGTTGCTTCCTCCAAGTTCGAAGGTTCCCACGCGCTTCGCTGCAGTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGTTTCACTGCAGTTCTTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCACTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTTTCGCTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAAGTTCGAAGGTTCTCACGCGCTGCGCTGCAGTTCCTTCCTCAAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTGTTGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCGCTCATGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTCGCTTCGCTGCGCTCATGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTTCTTCCCCAAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGATTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCATTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACGCTACGCTGCTTCCTTCTCCAAGTTCGAGGGTCCTCATGCTACGCTCGGCTACATTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGAAAAGGGCATGGCGGCGACACAAGTCCAAGGACATGTCCCAAAGCGAGGAACATGTCCCTGTACTCGTGCTGAAAGGCGCGACGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGACCGTGCACTCGTGCTGA ATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCGATCTTCACGTCTGTCTTTGATCGCCTCAAAGTAACAAACGATCAACCTAAAAGAAAGATGAACAACTTGGAGTTGAAACTTTTCGATGAAGTAAACAGTGACAAGAAGCTTCATAGTAGCATCCCGTCACGTATGAAGAGGAAGTTTTCTGTTCTCATAAATACGGAAGGTTCCTTGAAGGATCTGATCAAGACCATGACAAAGATAAGAGCTTTTAAATGTAAAAGCTCCTTGTCGCAAGAGCCTAAACTGCATGATGCTCCTAGCCCACACGAGCTTAAAAGCGAATGGAAGTTGCTTCCTCCAAGTTCGAAGGTTCCCACGCGCTTCGCTGCAGTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGTTTCACTGCAGTTCTTTCCTCACAGTTCGAAGGTTCTCACGCGCTTCACTGCAGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTTCGCTCACGCGCTTCGCTGCGTTCCTTCCTCCAAGTTCGAAGGTTCTCACACGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTTTCGCTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCAAAGTTCGAAGGTTCTCACGCGCTGCGCTGCAGTTCCTTCCTCAAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGTTCCTTCCTCACAATTCGAAGGTTCTCACGCGCTTCGCTGTTGTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCGCTCATGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTCGCTTCGCTGCGCTCATGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTTCTTCCCCAAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGATTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCATTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACGCTACGCTGCTTCCTTCTCCAAGTTCGAGGGTCCTCATGCTACGCTCGGCTACATTGCTGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGAAAAGGGCATGGCGGCGACACAAGTCCAAGGACATGTCCCAAAGCGAGGAACATGTCCCTGTACTCGTGCTGAAAGGCGCGACGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGACCGTGCACTCGTGCTGA MFDVHLHSTFSFPKAKCLHIEEKSIFTSVFDRLKVTNDQPKRKMNNLELKLFDEVNSDKKLHSSIPSRMKRKFSVLINTEGSLKDLIKTMTKIRAFKCKSSLSQEPKLHDAPSPHELKSEWKLLPPSSKVPTRFAAVPSPKFEGSHALRCSSFPPSSKVLTSLRCSSFLQVRRFSRVSLQFFPHSSKVLTRFTAVPSPQVRRFSRRFAEFLPPSLKVLTSLRFAHALRCVPSSKFEGSHTLRSAIPSPKFEGSHALRAVPSSKFEGSHAFRCISFPPNSKVLTRFAAVPSSKFEGSHALRCSSFLKVQRFSRASLQFFPPSSKVLTRFAAVPSPQVRSSFLTIRRFSRASLLFLPPKFEGSHVASLRSCASLQFLPPSLKVLTSLRCDPSSKFEGSHALRSAIPSPSSKVLTRFVQFLPPNSKVLTRRFAALMRFAAVPSSKFEGSHIASLRSFLQVRRFSRASLCNSFPKFEGSHALRAVPSSKFEGSHALRCISFPPNSKVLTRFAAVPSSKFEGSHALRSAISSPKFEGSHALRAVPSSKFEGSHALRCSSFPPNSKVLTRFAAVPSPQVRRFSRTSLQFLPPSSKVLTRFAAFQRYFLKSKDVNCPHATLLPSPSSRVLMLRSATLLRYFLKSKDVNCPCTHAEKGMAATQVQGHVPKRGTCPCTRAERRDGGTSPRNMSQLKEHVRALVLKGVAAAQVQGTCPNSRNMTVHSC Homology
BLAST of Lag0021605 vs. NCBI nr
Match: KAA0051997.1 (hypothetical protein E6C27_scaffold60G004810 [Cucumis melo var. makuwa] >TYK04562.1 hypothetical protein E5676_scaffold409G001950 [Cucumis melo var. makuwa]) HSP 1 Score: 84.7 bits (208), Expect = 3.5e-12 Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of Lag0021605 vs. NCBI nr
Match: KAA0056218.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa]) HSP 1 Score: 80.5 bits (197), Expect = 6.6e-11 Identity = 54/122 (44.26%), Postives = 67/122 (54.92%), Query Frame = 0
BLAST of Lag0021605 vs. NCBI nr
Match: TYK30948.1 (hypothetical protein E5676_scaffold455G001730 [Cucumis melo var. makuwa]) HSP 1 Score: 79.0 bits (193), Expect = 1.9e-10 Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of Lag0021605 vs. NCBI nr
Match: KAA0065966.1 (hypothetical protein E6C27_scaffold62G00430 [Cucumis melo var. makuwa]) HSP 1 Score: 76.6 bits (187), Expect = 9.5e-10 Identity = 56/130 (43.08%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of Lag0021605 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 75.5 bits (184), Expect = 2.1e-09 Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 0
BLAST of Lag0021605 vs. ExPASy TrEMBL
Match: A0A5A7UC34 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G001950 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 1.7e-12 Identity = 44/90 (48.89%), Postives = 60/90 (66.67%), Query Frame = 0
BLAST of Lag0021605 vs. ExPASy TrEMBL
Match: A0A5A7UM99 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold731G00010 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 3.2e-11 Identity = 54/122 (44.26%), Postives = 67/122 (54.92%), Query Frame = 0
BLAST of Lag0021605 vs. ExPASy TrEMBL
Match: A0A5D3E580 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold455G001730 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 9.2e-11 Identity = 43/78 (55.13%), Postives = 53/78 (67.95%), Query Frame = 0
BLAST of Lag0021605 vs. ExPASy TrEMBL
Match: A0A5A7VHY3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold62G00430 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 4.6e-10 Identity = 56/130 (43.08%), Postives = 69/130 (53.08%), Query Frame = 0
BLAST of Lag0021605 vs. ExPASy TrEMBL
Match: A0A5A7VRG7 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G001010 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.0e-09 Identity = 38/57 (66.67%), Postives = 45/57 (78.95%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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