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Lag0021552 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTATATTCTCTCTCTTTTGGGGCTAGTAGCTACAGGGCCTGGAAGGTACAATGTGAATAATAATGGCGGTTGTTGGCAAGAAAGTCGTAATGGACTTTCAATGTCTGCTTGTGTGGTTAGTTATCTAAAAGTAGTTCTGTTGTTTTTTCCTCATTAGGTTTGTTGATCATAAATTTTCTTATTGTTGTAACAGGATAATGGGGAGGTTAAATGTAAATGTCCTCCAGGATTTAGAGGTGATGTTGTCAAAAATTGTGAAGGTAAACAAACTTTGATTGTTGACATGCTCAATTCATGGTTTTCTAAATCCTGCTTTGGCTTATTGATTTTGAACCTTGCTGGACTAAATTCATTCTCTTCATCTACTTTGACTTGGAACACTCATAATTGTCGTTCAAGTGATCCCATTTTTTTCATGAAAACCATTGAATATGCTTGTGTTGAAATTTCTTTCAACGTTTAATCTGGATTTTTTTTCTCTTCTGAGCAAACTGCAATCCTTTCAGGAAGCTGAGGCAATCCTGGAGGAATTAAATCCATCTCCCGTGCAAGTTCTGGGTTATGGTTTGGTAAGTGATGCACTACAATCGGAGGGATAGAATAAATAATAATCATTTAAAAAGTAATTCTAAGCATAAATTTTCCAAATGTAATGTATTTTCTCTCACTTTGTCCCAGTCCAGCTATATTAATGTTCATTTCATAGGATTAGTTTTTTTTTTTCTTTTCTTGGGGGGGTTCTGATGTGCATCTTTCTCTAAACTTGGTTCTTTATTTTGTGCAGGGTCTTGCTGCAACTTTATATGCTTTACTAGGTAATGCAAGTCTCATTTACAATCTACTGTTTGCATAA ATGTATATTCTCTCTCTTTTGGGGCTAGTAGCTACAGGGCCTGGAAGGTACAATGTGAATAATAATGGCGGTTGTTGGCAAGAAAGTCGTAATGGACTTTCAATGTCTGCTTGTGTGGATAATGGGGAGGTTAAATGTAAATGTCCTCCAGGATTTAGAGGTGATGTTGTCAAAAATTGTGAAGCTGAGGCAATCCTGGAGGAATTAAATCCATCTCCCGTGCAAGTTCTGGGTTATGGTTTGGGTCTTGCTGCAACTTTATATGCTTTACTAGGTAATGCAAGTCTCATTTACAATCTACTGTTTGCATAA ATGTATATTCTCTCTCTTTTGGGGCTAGTAGCTACAGGGCCTGGAAGGTACAATGTGAATAATAATGGCGGTTGTTGGCAAGAAAGTCGTAATGGACTTTCAATGTCTGCTTGTGTGGATAATGGGGAGGTTAAATGTAAATGTCCTCCAGGATTTAGAGGTGATGTTGTCAAAAATTGTGAAGCTGAGGCAATCCTGGAGGAATTAAATCCATCTCCCGTGCAAGTTCTGGGTTATGGTTTGGGTCTTGCTGCAACTTTATATGCTTTACTAGGTAATGCAAGTCTCATTTACAATCTACTGTTTGCATAA MYILSLLGLVATGPGRYNVNNNGGCWQESRNGLSMSACVDNGEVKCKCPPGFRGDVVKNCEAEAILEELNPSPVQVLGYGLGLAATLYALLGNASLIYNLLFA Homology
BLAST of Lag0021552 vs. NCBI nr
Match: XP_038903832.1 (vacuolar-sorting receptor 4-like isoform X1 [Benincasa hispida]) HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18 Identity = 47/52 (90.38%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of Lag0021552 vs. NCBI nr
Match: XP_008454392.1 (PREDICTED: vacuolar-sorting receptor 4-like isoform X1 [Cucumis melo]) HSP 1 Score: 102.8 bits (255), Expect = 1.8e-18 Identity = 47/52 (90.38%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of Lag0021552 vs. NCBI nr
Match: XP_011652916.1 (vacuolar-sorting receptor 4 isoform X1 [Cucumis sativus]) HSP 1 Score: 101.7 bits (252), Expect = 3.9e-18 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 0
BLAST of Lag0021552 vs. NCBI nr
Match: KAA0044343.1 (vacuolar-sorting receptor 4-like isoform X2 [Cucumis melo var. makuwa] >TYK29472.1 vacuolar-sorting receptor 4-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 101.3 bits (251), Expect = 5.2e-18 Identity = 46/51 (90.20%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of Lag0021552 vs. NCBI nr
Match: XP_008454393.1 (PREDICTED: vacuolar-sorting receptor 4-like isoform X2 [Cucumis melo]) HSP 1 Score: 101.3 bits (251), Expect = 5.2e-18 Identity = 46/51 (90.20%), Postives = 46/51 (90.20%), Query Frame = 0
BLAST of Lag0021552 vs. ExPASy Swiss-Prot
Match: Q56ZQ3 (Vacuolar-sorting receptor 4 OS=Arabidopsis thaliana OX=3702 GN=VSR4 PE=2 SV=2) HSP 1 Score: 76.6 bits (187), Expect = 1.8e-13 Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 0
BLAST of Lag0021552 vs. ExPASy Swiss-Prot
Match: O80977 (Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana OX=3702 GN=VSR3 PE=2 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 5.2e-13 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
BLAST of Lag0021552 vs. ExPASy Swiss-Prot
Match: P93484 (Vacuolar-sorting receptor 1 OS=Pisum sativum OX=3888 GN=BP80 PE=1 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 6.8e-13 Identity = 31/50 (62.00%), Postives = 40/50 (80.00%), Query Frame = 0
BLAST of Lag0021552 vs. ExPASy Swiss-Prot
Match: P93026 (Vacuolar-sorting receptor 1 OS=Arabidopsis thaliana OX=3702 GN=VSR1 PE=1 SV=2) HSP 1 Score: 68.9 bits (167), Expect = 3.7e-11 Identity = 28/41 (68.29%), Postives = 32/41 (78.05%), Query Frame = 0
BLAST of Lag0021552 vs. ExPASy Swiss-Prot
Match: Q8L7E3 (Vacuolar-sorting receptor 7 OS=Arabidopsis thaliana OX=3702 GN=VSR7 PE=2 SV=2) HSP 1 Score: 60.5 bits (145), Expect = 1.3e-08 Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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