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Lag0021517 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCACATTATGCTAAGAAAAGAAATTTTGGTTAAATCGAACCCAGTCCTGGAACAGAGGTCGAAGCCTGTACCCATCAGGTCCAATATAATTGAACCCAGTCCTAGAACTGAGGTCGAAGCCTGTACCCATCAGGTCCAATATATTTCGAACTCAACCCTGGAGCTGAGGTCGAAATCTTCTCAAATTTTGGTTAAATCGAACCCAGTCCTGGAACAGAGGTCGAAGCCTGTACCCATCAGGTCCAATATATTTCGAACTCAACCCTGGAGCTGAGGTCGAAATCTTCTCAAATTTTGGTTAAATCGAACCCAGTCCTGGAACAGAGGTCGAAGCCTGTACCATCAGGTCCAATATATTTGAACCCAACCCTGGAAGCTGAGGTCGAAATCTTCTCAAATTTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTACCCATCAGGTCCAATATATTTCGAACCCAACCCTGGAAGCTGAGGTCGAAATCTTCTCAAATTTTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTCCACTATATTTCGAACCCAGCCCTAGAGCTGAGGTCGAAGTCTTCTCAAGTTCTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTCCACTATATTTCGAACCCAGCCCTAGAGTTGAGGTCGAAGTTTTCTCAAGTTTTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTTCAATATATTTCGAATGCAACCCTAGGGCTGAGGTCGAAGTCTTCTCAAATTTTGGCTAAATTGAACCCAGTCCTAGAACTGAGGTCGAAGCCTGTATTCATCAGGTAA ATGCACATTATGCTAAGAAAAGAAATTTTGGTTAAATCGAACCCAGTCCTGGAACAGAGGTCGAAGCCTGTACCCATCAGGTCCAATATAATTGAACCCAGTCCTAGAACTGAGGTCGAAGCCTGTACCCATCAGGTCCAATATATTTCGAACTCAACCCTGGAGCTGAGGTCGAAATCTTCTCAAATTTTGGTTAAATCGAACCCAGTCCTGGAACAGAGGTCGAAGCCTGTACCATCAGGTCCAATATATTTGAACCCAACCCTGGAAGCTGAGGTCGAAATCTTCTCAAATTTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTACCCATCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTCCACTATATTTCGAACCCAGCCCTAGAGCTGAGGTCGAAGTCTTCTCAAGTTCTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTTCAATATATTTCGAATGCAACCCTAGGGCTGAGGTCGAAGTCTTCTCAAATTTTGGCTAAATTGAACCCAGTCCTAGAACTGAGGTCGAAGCCTGTATTCATCAGGTAA ATGCACATTATGCTAAGAAAAGAAATTTTGGTTAAATCGAACCCAGTCCTGGAACAGAGGTCGAAGCCTGTACCCATCAGGTCCAATATAATTGAACCCAGTCCTAGAACTGAGGTCGAAGCCTGTACCCATCAGGTCCAATATATTTCGAACTCAACCCTGGAGCTGAGGTCGAAATCTTCTCAAATTTTGGTTAAATCGAACCCAGTCCTGGAACAGAGGTCGAAGCCTGTACCATCAGGTCCAATATATTTGAACCCAACCCTGGAAGCTGAGGTCGAAATCTTCTCAAATTTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTACCCATCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTCCACTATATTTCGAACCCAGCCCTAGAGCTGAGGTCGAAGTCTTCTCAAGTTCTGGTTAAATCGAACCCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGTCCTGGAACTGAGGTCGAAGCCTGTATCCATCAGGTTCAATATATTTCGAATGCAACCCTAGGGCTGAGGTCGAAGTCTTCTCAAATTTTGGCTAAATTGAACCCAGTCCTAGAACTGAGGTCGAAGCCTGTATTCATCAGGTAA MHIMLRKEILVKSNPVLEQRSKPVPIRSNIIEPSPRTEVEACTHQVQYISNSTLELRSKSSQILVKSNPVLEQRSKPVPSGPIYLNPTLEAEVEIFSNLVKSNPVLELRSKPVPISPGTEVEACIHQVHYISNPALELRSKSSQVLVKSNPVLELRSKPVSISPGTEVEACIHQVQYISNATLGLRSKSSQILAKLNPVLELRSKPVFIR Homology
BLAST of Lag0021517 vs. NCBI nr
Match: KAA0042506.1 (putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]) HSP 1 Score: 75.5 bits (184), Expect = 6.2e-10 Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 0
BLAST of Lag0021517 vs. NCBI nr
Match: KAA0036934.1 (uncharacterized protein E6C27_scaffold86G00070 [Cucumis melo var. makuwa]) HSP 1 Score: 75.5 bits (184), Expect = 6.2e-10 Identity = 62/161 (38.51%), Postives = 89/161 (55.28%), Query Frame = 0
BLAST of Lag0021517 vs. NCBI nr
Match: KAA0067952.1 (uncharacterized protein E6C27_scaffold138G001360 [Cucumis melo var. makuwa]) HSP 1 Score: 65.9 bits (159), Expect = 4.9e-07 Identity = 49/120 (40.83%), Postives = 68/120 (56.67%), Query Frame = 0
BLAST of Lag0021517 vs. NCBI nr
Match: TYK20464.1 (putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H [Cucumis melo var. makuwa]) HSP 1 Score: 65.1 bits (157), Expect = 8.3e-07 Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 0
BLAST of Lag0021517 vs. NCBI nr
Match: TYK03242.1 (putative integrase [Cucumis melo var. makuwa]) HSP 1 Score: 63.9 bits (154), Expect = 1.9e-06 Identity = 59/172 (34.30%), Postives = 93/172 (54.07%), Query Frame = 0
BLAST of Lag0021517 vs. ExPASy TrEMBL
Match: A0A5A7T0A1 (Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00070 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 3.0e-10 Identity = 62/161 (38.51%), Postives = 89/161 (55.28%), Query Frame = 0
BLAST of Lag0021517 vs. ExPASy TrEMBL
Match: A0A5A7TKN3 (Putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold246G00600 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 3.0e-10 Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 0
BLAST of Lag0021517 vs. ExPASy TrEMBL
Match: A0A5A7VHZ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold138G001360 PE=4 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 2.4e-07 Identity = 49/120 (40.83%), Postives = 68/120 (56.67%), Query Frame = 0
BLAST of Lag0021517 vs. ExPASy TrEMBL
Match: A0A5D3DAC8 (Putative RNA-directed DNA polymerase (Reverse transcriptase), Ribonuclease H OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G00320 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.0e-07 Identity = 48/123 (39.02%), Postives = 68/123 (55.28%), Query Frame = 0
BLAST of Lag0021517 vs. ExPASy TrEMBL
Match: A0A5D3BWN6 (Putative integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold298G00590 PE=4 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 9.0e-07 Identity = 59/172 (34.30%), Postives = 93/172 (54.07%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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