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Lag0021510 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGAAAATTACCTTCCTAAACAGGTTGAATCCAACCATTAGGGCTGAAGTGATCAGTCGACAACATCTCGGGCTAGATGATATTATGAAGCAAGCCCATGTAGTCAAAGATAAGGATATGGTAGTGAAAATGGCCATAGAGATGATGGACTCGGGCACGTCAAATGATGTGGGAAAGGCAACCCAACCACTTAGCTCCAAAAGAAATGGGTCAAGTATGGTCAAGTTGAGTATCCGAAGATTTGATTCTGTAGCTACTTGTTCGATAAGCCTACTTGAGATAGGAAGAGCAAATTGTCGAGAATTACATTCGAAGAGGTTGACTGATGTGGAGTTTCAAGCGAAGCTAGAAAAGGGTTTGTGTTTCGGTTGTGACGAGAAGTATACAACCAACCATTGTTAGATCGAGAGCTCAGAGAGTGTAAGTCCTCCTTATGAATGATTTAGAAGAAATTGAGTTATTGTCGTGTGACGAAGTAGAGGAAGCTTCGAAGGCACAAAGTTTGGAAGTTGACGATCTAGTAGAGTTGGATTTGAAATCAGTGATTGGTTTTTCAACACCGGGTGCTATGCAGCTGAAAAGGAAGGTATGAGAACGAGAGGTAATCATTTTGATTGATTATGGAGCTACCCACAATTTTGTGGCACAACGCTTATTGTAGGAGCTTAAATTGCCTCAAACAGTAACCTCGAAGGAATCGTCATGGGTTGTGTAACTGTTAAAGGGAAGGGCGTTTGTAAGTTAATCATTGTGAACCTCCCGAATTGTTCGTTCAGGAGAATTTCTTACCCCTAGATTTGGGAGGAGCTGATATTATACTGGGAATGTAGTGACTTCGAACAATGGGATTCATGGGGTCAAATGGACTGATTTAATAATGACGTTCAAGATTAACGACCCCACATTTATGATAAGAGGGGACCCAACTTTGATGAAGACTGAGATTTCGCTTAGAATGATGACCCAAACCTGGACCAAACATGATCAAGGGGTATTTGGTTAAGCTATGTGGATTGAGTATGGATCCTTAGGATTGGAAAGAACCACTCGTAAGTAAAGAGACGACAGTGGAAAGGGTTGTGGTTTAGGAATTACTAAACGCATATGTGTCAATGTTCGAACTTCGAGCTGGATTACCTCCAAGAAGGAACATGGATCACCAAATTGTGTTGAGAGAAGGGCAACAAAACAAGATTGAATGATTAGTGGAAGAGATGTCGGCTTCTGAAATTATTAGACCAAACACAAGTCTTTTCTCGAGCCCTATACTCTTGGTCAAGAAGAAAGATGGGGGTGGAGGTTTTGTGTTGATTATCGAGCACTGAACCAAGCTACAATTCCTGATAAATTCTTGATACCAGTTATAGAAGAGTTACTTGATGAGTTGAATTGGTCAACAATTTACTCGAAGTCGAAGCTTTACCTTAAGTCGGGGTACCATCGGATTCGAATGCTGGAGTTGAACATATACCAAAAAACGCTTTCAGGACTCATGAAGACCACTTTGAGTTTTTGGTTATGCCTTTCGGTTTAACCAAATGCCCTGCAATATTTCAATCTCTAATGAACCTTGATGACATCCTAGTATACAACCTTGATGAAAAACACACTGGAAGCATTTGGCCGTTGTATTCAACACATTGAAGGAACACTCTTTGTATACTAATGGGAAGAAGTGTGTGTTTGCAAGGATTCAGGTGGAATATTAAGATAAAAGGCTATGATGGAGTGGCCTGTGCCTTGTTAAGTGAAGGAACTAAGGGGATTTCTTGGATTGATTGGTTATTACGGATGTTTTGTGATGAATTATGGAATGTTTGTTGTCCTATTGACTCAGTTGTTGAAGAAATACTCCTAAACATGGGTGGTGGAAACTACTCAAGCTTTTGA ATGATGAAAATTACCTTCCTAAACAGGTTGAATCCAACCATTAGGGCTGAAGTGATCAGTCGACAACATCTCGGGCTAGATGATATTATGAAGCAAGCCCATGTAGTCAAAGATAAGGATATGGTAGTGAAAATGGCCATAGAGATGATGGACTCGGGCACGTCAAATGATGTGGGAAAGGCAACCCAACCACTTAGCTCCAAAAGAAATGGGTCAAGTATGGTCAAGTTGAGTATCCGAAGATTTGATTCTGTAGCTACTTGTTCGATAAGCCTACTTGAGATAGGAAGAGCAAATTGTCGAGAATTACATTCGAAGAGGTTGACTGATGTGGAGTTTCAAGCGAAGCTAGAAAAGGAAGAAATTGAGTTATTGTCGTGTGACGAAGTAGAGGAAGCTTCGAAGGCACAAAGTTTGGAAGTTGACGATCTAGTAGAGTTGGATTTGAAATCAGTGATTGGTTTTTCAACACCGGGTGCTATGCAGCTGAAAAGGAAGACCAAACACAAGTCTTTTCTCGAGCCCTATACTCTTGGTCAAGAAGAAAGATGGGGGTGGAGGTTTTGTGTTGATTATCGAGCACTGAACCAAGCTACAATTCCTGATAAATTCTTGATACCAGTTATAGAAGAGTTACTTGATGAGTTGAATTGGTCAACAATTTACTCGAAGTCGAAGCTTTACCTTAAGTCGGGGTACCATCGGATTCGAATGCTGGAGTTGAACATATACCAAAAAACGCTTTCAGGACTCATGAAGACCACTTTGAGTTTTTGGTGGAATATTAAGATAAAAGGCTATGATGGAGTGGCCTGTGCCTTGTTAAGTGAAGGAACTAAGGGGATTTCTTGGATTGATTGGTTATTACGGATGTTTTGTGATGAATTATGGAATGTTTGTTGTCCTATTGACTCAGTTGTTGAAGAAATACTCCTAAACATGGGTGGTGGAAACTACTCAAGCTTTTGA ATGATGAAAATTACCTTCCTAAACAGGTTGAATCCAACCATTAGGGCTGAAGTGATCAGTCGACAACATCTCGGGCTAGATGATATTATGAAGCAAGCCCATGTAGTCAAAGATAAGGATATGGTAGTGAAAATGGCCATAGAGATGATGGACTCGGGCACGTCAAATGATGTGGGAAAGGCAACCCAACCACTTAGCTCCAAAAGAAATGGGTCAAGTATGGTCAAGTTGAGTATCCGAAGATTTGATTCTGTAGCTACTTGTTCGATAAGCCTACTTGAGATAGGAAGAGCAAATTGTCGAGAATTACATTCGAAGAGGTTGACTGATGTGGAGTTTCAAGCGAAGCTAGAAAAGGAAGAAATTGAGTTATTGTCGTGTGACGAAGTAGAGGAAGCTTCGAAGGCACAAAGTTTGGAAGTTGACGATCTAGTAGAGTTGGATTTGAAATCAGTGATTGGTTTTTCAACACCGGGTGCTATGCAGCTGAAAAGGAAGACCAAACACAAGTCTTTTCTCGAGCCCTATACTCTTGGTCAAGAAGAAAGATGGGGGTGGAGGTTTTGTGTTGATTATCGAGCACTGAACCAAGCTACAATTCCTGATAAATTCTTGATACCAGTTATAGAAGAGTTACTTGATGAGTTGAATTGGTCAACAATTTACTCGAAGTCGAAGCTTTACCTTAAGTCGGGGTACCATCGGATTCGAATGCTGGAGTTGAACATATACCAAAAAACGCTTTCAGGACTCATGAAGACCACTTTGAGTTTTTGGTGGAATATTAAGATAAAAGGCTATGATGGAGTGGCCTGTGCCTTGTTAAGTGAAGGAACTAAGGGGATTTCTTGGATTGATTGGTTATTACGGATGTTTTGTGATGAATTATGGAATGTTTGTTGTCCTATTGACTCAGTTGTTGAAGAAATACTCCTAAACATGGGTGGTGGAAACTACTCAAGCTTTTGA MMKITFLNRLNPTIRAEVISRQHLGLDDIMKQAHVVKDKDMVVKMAIEMMDSGTSNDVGKATQPLSSKRNGSSMVKLSIRRFDSVATCSISLLEIGRANCRELHSKRLTDVEFQAKLEKEEIELLSCDEVEEASKAQSLEVDDLVELDLKSVIGFSTPGAMQLKRKTKHKSFLEPYTLGQEERWGWRFCVDYRALNQATIPDKFLIPVIEELLDELNWSTIYSKSKLYLKSGYHRIRMLELNIYQKTLSGLMKTTLSFWWNIKIKGYDGVACALLSEGTKGISWIDWLLRMFCDELWNVCCPIDSVVEEILLNMGGGNYSSF Homology
BLAST of Lag0021510 vs. NCBI nr
Match: KAA0043267.1 (Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa] >TYK29331.1 Transposon Ty3-I Gag-Pol polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 4.4e-15 Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Lag0021510 vs. NCBI nr
Match: XP_015964281.2 (uncharacterized protein LOC107488099 [Arachis duranensis]) HSP 1 Score: 93.2 bits (230), Expect = 4.4e-15 Identity = 45/74 (60.81%), Postives = 59/74 (79.73%), Query Frame = 0
BLAST of Lag0021510 vs. NCBI nr
Match: KAA0042859.1 (hypothetical protein E6C27_scaffold44G003720 [Cucumis melo var. makuwa] >TYK05264.1 hypothetical protein E5676_scaffold108G00800 [Cucumis melo var. makuwa]) HSP 1 Score: 93.2 bits (230), Expect = 4.4e-15 Identity = 48/78 (61.54%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of Lag0021510 vs. NCBI nr
Match: XP_025611868.1 (uncharacterized protein LOC112705246 [Arachis hypogaea]) HSP 1 Score: 92.8 bits (229), Expect = 5.7e-15 Identity = 45/74 (60.81%), Postives = 58/74 (78.38%), Query Frame = 0
BLAST of Lag0021510 vs. NCBI nr
Match: KAA0064293.1 (Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa] >TYK01029.1 Retrovirus-related Pol polyprotein from transposon 297 family [Cucumis melo var. makuwa]) HSP 1 Score: 92.4 bits (228), Expect = 7.5e-15 Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Lag0021510 vs. ExPASy Swiss-Prot
Match: Q99315 (Transposon Ty3-G Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-G PE=1 SV=3) HSP 1 Score: 51.6 bits (122), Expect = 1.9e-05 Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of Lag0021510 vs. ExPASy Swiss-Prot
Match: Q7LHG5 (Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2) HSP 1 Score: 51.6 bits (122), Expect = 1.9e-05 Identity = 28/64 (43.75%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of Lag0021510 vs. ExPASy Swiss-Prot
Match: P31843 (RNA-directed DNA polymerase homolog OS=Oenothera berteroana OX=3950 PE=4 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 9.5e-05 Identity = 23/52 (44.23%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of Lag0021510 vs. ExPASy Swiss-Prot
Match: P10394 (Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.6e-04 Identity = 44/174 (25.29%), Postives = 82/174 (47.13%), Query Frame = 0
BLAST of Lag0021510 vs. ExPASy Swiss-Prot
Match: Q9UR07 (Transposon Tf2-11 polyprotein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=Tf2-11 PE=3 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 6.2e-04 Identity = 24/52 (46.15%), Postives = 36/52 (69.23%), Query Frame = 0
BLAST of Lag0021510 vs. ExPASy TrEMBL
Match: A0A5D3C1V9 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold108G00800 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.1e-15 Identity = 48/78 (61.54%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of Lag0021510 vs. ExPASy TrEMBL
Match: A0A5D3E123 (Transposon Ty3-I Gag-Pol polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold129G00390 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.1e-15 Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0
BLAST of Lag0021510 vs. ExPASy TrEMBL
Match: A0A6P4DBC2 (uncharacterized protein LOC107488099 OS=Arachis duranensis OX=130453 GN=LOC107488099 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 2.1e-15 Identity = 45/74 (60.81%), Postives = 59/74 (79.73%), Query Frame = 0
BLAST of Lag0021510 vs. ExPASy TrEMBL
Match: A0A6D2L909 (Reverse transcriptase domain-containing protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS48603 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 3.6e-15 Identity = 48/82 (58.54%), Postives = 63/82 (76.83%), Query Frame = 0
BLAST of Lag0021510 vs. ExPASy TrEMBL
Match: A0A5D3BSG2 (Retrovirus-related Pol polyprotein from transposon 297 family OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G00340 PE=4 SV=1) HSP 1 Score: 92.4 bits (228), Expect = 3.6e-15 Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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