Lag0021075 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0021075
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotran_gag_3 domain-containing protein
Location	chr7: 4430614 .. 4431234 (+)
RNA-Seq Expression	Lag0021075
Synteny	Lag0021075

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGATCACTGAAGTTGATCCCTCTACTGAAGTTTCCCGAAGTTCGAGTGAATCTGCCCTAATTTCAAATCCGAGTTCAAATTCAAATTCCTCGGTTTCTCTCCTCAACAACATCTGCAATTTGGTTTCCGTGCGACTCGATTCGACGAATTATGTTCTTTGGAGGTTTCAAATTTCTCCTCTTCTGAAATCGCACAAACTTTTCAAGTATGTTGATGGCTCAATCAAGGCTCCTGAAGCTATTGTTAGGGTTGAAGGACAGCCTCCTCGCATTAATCCTGAGTTCGAGGTTTGGTATGAACGTGATCAGGCTCTTATCACACTGATCAACGCTACCTTGACGCAAACTGCCTTATCGTATGTTATTGGTTGTCAAACTTCCAAAGAGGTTTGGGATCGGTTGGAGAAACACTTTTCGTCATCTACTCGTACTAATATTGTTGGCTTGAAGACCGAATTACAGAGCGTTTCCATGAAGTCTGGTGAAACGGTTGATGTGTATGTTCGTCGAATTAAAGAAATAGTTAACAAGTTGGCTGCTGTCTCTGTCATTATTGATTCCGAGGACCTCATAATCTACACTGTCAATGGTCTTCCATCTGGTGGTTATTATCAATAA

mRNA sequence

ATGACGATCACTGAAGTTGATCCCTCTACTGAAGTTTCCCGAAGTTCGAGTGAATCTGCCCTAATTTCAAATCCGAGTTCAAATTCAAATTCCTCGGTTTCTCTCCTCAACAACATCTGCAATTTGGTTTCCGTGCGACTCGATTCGACGAATTATGTTCTTTGGAGGTTTCAAATTTCTCCTCTTCTGAAATCGCACAAACTTTTCAAGTATGTTGATGGCTCAATCAAGGCTCCTGAAGCTATTGTTAGGGTTGAAGGACAGCCTCCTCGCATTAATCCTGAGTTCGAGGTTTGGTATGAACGTGATCAGGCTCTTATCACACTGATCAACGCTACCTTGACGCAAACTGCCTTATCGTATGTTATTGGTTGTCAAACTTCCAAAGAGGTTTGGGATCGGTTGGAGAAACACTTTTCGTCATCTACTCGTACTAATATTGTTGGCTTGAAGACCGAATTACAGAGCGTTTCCATGAAGTCTGGTGAAACGGTTGATGTGTATGTTCGTCGAATTAAAGAAATAGTTAACAAGTTGGCTGCTGTCTCTGTCATTATTGATTCCGAGGACCTCATAATCTACACTGTCAATGGTCTTCCATCTGGTGGTTATTATCAATAA

Coding sequence (CDS)

ATGACGATCACTGAAGTTGATCCCTCTACTGAAGTTTCCCGAAGTTCGAGTGAATCTGCCCTAATTTCAAATCCGAGTTCAAATTCAAATTCCTCGGTTTCTCTCCTCAACAACATCTGCAATTTGGTTTCCGTGCGACTCGATTCGACGAATTATGTTCTTTGGAGGTTTCAAATTTCTCCTCTTCTGAAATCGCACAAACTTTTCAAGTATGTTGATGGCTCAATCAAGGCTCCTGAAGCTATTGTTAGGGTTGAAGGACAGCCTCCTCGCATTAATCCTGAGTTCGAGGTTTGGTATGAACGTGATCAGGCTCTTATCACACTGATCAACGCTACCTTGACGCAAACTGCCTTATCGTATGTTATTGGTTGTCAAACTTCCAAAGAGGTTTGGGATCGGTTGGAGAAACACTTTTCGTCATCTACTCGTACTAATATTGTTGGCTTGAAGACCGAATTACAGAGCGTTTCCATGAAGTCTGGTGAAACGGTTGATGTGTATGTTCGTCGAATTAAAGAAATAGTTAACAAGTTGGCTGCTGTCTCTGTCATTATTGATTCCGAGGACCTCATAATCTACACTGTCAATGGTCTTCCATCTGGTGGTTATTATCAATAA

Protein sequence

MTITEVDPSTEVSRSSSESALISNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDGSIKAPEAIVRVEGQPPRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDLIIYTVNGLPSGGYYQ

Homology

[Close]

BLAST of Lag0021075 vs. NCBI nr
Match: XP_022158689.1 (uncharacterized protein LOC111025150 [Momordica charantia])

HSP 1 Score: 196.1 bits (497), Expect = 3.1e-46
Identity = 94/183 (51.37%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 23  SNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDGSIKAPEAI 82
           S P  + +S + LL+NICNLVS+RLDS+N+VLW+FQ++ +LK+HKL+ ++DGS   P   
Sbjct: 5   SQPPKDLSSPIFLLSNICNLVSLRLDSSNFVLWKFQLTAILKAHKLYGFIDGSTPKPAEF 64

Query: 83  V-----RVEGQPPRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEVWDRLEK 142
           +          PP  NP F  W  +D AL+TL+NA L+ +AL+YV+GC +S++VW  L K
Sbjct: 65  LVSXXDXSSSXPPAANPAFSEWIAKDHALMTLLNAXLSSSALAYVVGCDSSQQVWQTLVK 124

Query: 143 HFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDLIIYTVN 201
           H+SSS+RTN+V LK++LQS+S K G ++D YV+RIKE+ +KLA V V++D+EDL+IYT+N
Sbjct: 125 HYSSSSRTNVVNLKSDLQSISKKPGXSIDXYVQRIKELKDKLANVXVLVDNEDLLIYTLN 184

[Close]

BLAST of Lag0021075 vs. NCBI nr
Match: XP_022150845.1 (uncharacterized protein LOC111018892 [Momordica charantia])

HSP 1 Score: 193.7 bits (491), Expect = 1.5e-45
Identity = 98/187 (52.41%), Postives = 139/187 (74.33%), Query Frame = 0


Query: 23  SNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDGSIKAPEAI 82
           +N   + +S + LL+NICNLVS+RLDST+++LW+FQ++ +LK+HKLF ++DGS+ AP   
Sbjct: 27  TNTKKDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVSAPSQF 86

Query: 83  V----RVEGQP------PRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEVW 142
           +      E QP      P INP FE W  +DQAL+TLINATL+  AL+YV+   TSK+VW
Sbjct: 87  LASSSETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGTSKQVW 146

Query: 143 DRLEKHFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDLI 200
           + LEKH+SS++RTN+V LK++LQS+  K+ E++D YV+RIKEI +K A VS+ I+ E L+
Sbjct: 147 EVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKDKFANVSITINDEYLL 206

[Close]

BLAST of Lag0021075 vs. NCBI nr
Match: KAG6588985.1 (Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.0 bits (484), Expect = 9.9e-45
Identity = 97/187 (51.87%), Postives = 142/187 (75.94%), Query Frame = 0


Query: 16  SSESALISNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDGS 75
           SS S+  S+  +N  S + LL+NICNL+S++LDSTNYVLW+FQ++ LLK+HKLF ++DG+
Sbjct: 3   SSNSSSSSSTETNLLSPIVLLSNICNLISIKLDSTNYVLWKFQLTTLLKAHKLFGFIDGT 62

Query: 76  IKAPEAIVRVEGQP-PRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEVWDR 135
                       QP P  NP ++ W+ +DQAL+T+INATL+  AL+YV+G  TSK+VW+ 
Sbjct: 63  ------------QPCPISNPSYDDWFAKDQALMTVINATLSPEALAYVVGSTTSKQVWNV 122

Query: 136 LEKHFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDLIIY 195
           L K +SSS+R+N+V LK++LQ++S KS E++D Y++RIKEI +KLA VS +++ EDL+IY
Sbjct: 123 LAKLYSSSSRSNVVNLKSDLQTISKKSDESIDAYIKRIKEIKDKLANVSTVVNDEDLLIY 177

Query: 196 TVNGLPS 202
            +NGLP+
Sbjct: 183 ALNGLPT 177

[Close]

BLAST of Lag0021075 vs. NCBI nr
Match: KAG7015254.1 (hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.0 bits (484), Expect = 9.9e-45
Identity = 97/187 (51.87%), Postives = 142/187 (75.94%), Query Frame = 0


Query: 16  SSESALISNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDGS 75
           SS S+  S+  +N  S + LL+NICNL+S++LDSTNYVLW+FQ++ LLK+HKLF ++DG+
Sbjct: 3   SSNSSSSSSTETNLLSPIVLLSNICNLISIKLDSTNYVLWKFQLTTLLKAHKLFGFIDGT 62

Query: 76  IKAPEAIVRVEGQP-PRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEVWDR 135
                       QP P  NP ++ W+ +DQAL+T+INATL+  AL+YV+G  TSK+VW+ 
Sbjct: 63  ------------QPCPISNPSYDDWFAKDQALMTVINATLSPEALAYVVGSTTSKQVWNV 122

Query: 136 LEKHFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDLIIY 195
           L K +SSS+R+N+V LK++LQ++S KS E++D Y++RIKEI +KLA VS +++ EDL+IY
Sbjct: 123 LAKLYSSSSRSNVVNLKSDLQTISKKSDESIDAYIKRIKEIKDKLANVSTVVNDEDLLIY 177

Query: 196 TVNGLPS 202
            +NGLP+
Sbjct: 183 ALNGLPT 177

[Close]

BLAST of Lag0021075 vs. NCBI nr
Match: KAE8645659.1 (hypothetical protein Csa_020439 [Cucumis sativus])

HSP 1 Score: 188.7 bits (478), Expect = 4.9e-44
Identity = 96/188 (51.06%), Postives = 139/188 (73.94%), Query Frame = 0


Query: 15  SSSESALISNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDG 74
           SSS +   S+   +S S + LL+NICNL+S+RLDSTN+VLW+FQ++ +LK+HKLF +VDG
Sbjct: 2   SSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLFGFVDG 61

Query: 75  SIKAPEAIVRVEGQ-PPRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEVWD 134
           +   P+         PP+ NP +E W  +DQAL+T+INATL+  AL+YV+G  +SK+VWD
Sbjct: 62  TNPCPQTSPSTTSTVPPQTNPLYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQVWD 121

Query: 135 RLEKHFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDLII 194
            L K +SS +R+N+V LK++LQ++  K  E++D Y++RIKEI +KLA VS  I+ EDL+I
Sbjct: 122 VLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDLLI 181

Query: 195 YTVNGLPS 202
           Y +NGLP+
Sbjct: 182 YALNGLPN 189

[Close]

BLAST of Lag0021075 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.8e-12
Identity = 42/171 (24.56%), Postives = 95/171 (55.56%), Query Frame = 0


Query: 31  SSVSLLN-NICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDGSIKAPEAIVRVEGQP 90
           ++ S+LN N+ N+   +L STNY++W  Q+  L   ++L  ++DGS   P A +  +   
Sbjct: 11  NNTSILNVNMSNV--TKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDA-A 70

Query: 91  PRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTRTNIVG 150
           PR+NP++  W  +D+ + + +   ++ +    V    T+ ++W+ L K +++ +  ++  
Sbjct: 71  PRVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQ 130

Query: 151 LKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDLIIYTVNGLP 201
           L+T+L+  + K  +T+D Y++ +    ++LA +   +D ++ +   +  LP
Sbjct: 131 LRTQLKQWT-KGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLP 177

[Close]

BLAST of Lag0021075 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-08
Identity = 31/121 (25.62%), Postives = 67/121 (55.37%), Query Frame = 0


Query: 32  SVSLLN-NICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDGSIKAPEAIVRVEGQPP 91
           + ++LN N+ N+   +L STNY++W  Q+  L   ++L  ++DGS   P A +  +   P
Sbjct: 12  NTNILNVNMSNV--TKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDA-VP 71

Query: 92  RINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEVWDRLEKHFSSSTRTNIVGL 151
           R+NP++  W  +D+ + + I   ++ +    V    T+ ++W+ L K +++ +  ++  L
Sbjct: 72  RVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQL 129

[Close]

BLAST of Lag0021075 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.5e-08
Identity = 39/147 (26.53%), Postives = 69/147 (46.94%), Query Frame = 0


Query: 55  WRFQISPLLKSHKLFKYVDGSIKAPEAIVRVEGQPPRINPEFEVWYERDQALITLINATL 114
           W+ ++  LL    L K +D   K P+ +            + E W + D+   + I   L
Sbjct: 20  WQRRMRDLLIQQGLHKVLDVDSKKPDTM------------KAEDWADLDERAASAIRLHL 79

Query: 115 TQTALSYVIGCQTSKEVWDRLEKHFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKE 174
           +   ++ +I   T++ +W RLE  + S T TN + LK +L ++ M  G     ++     
Sbjct: 80  SDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFNG 139

Query: 175 IVNKLAAVSVIIDSEDLIIYTVNGLPS 202
           ++ +LA + V I+ ED  I  +N LPS
Sbjct: 140 LITQLANLGVKIEEEDKAILLLNSLPS 154

[Close]

BLAST of Lag0021075 vs. ExPASy TrEMBL
Match: A0A6J1E049 (uncharacterized protein LOC111025150 OS=Momordica charantia OX=3673 GN=LOC111025150 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 1.5e-46
Identity = 94/183 (51.37%), Postives = 136/183 (74.32%), Query Frame = 0


Query: 23  SNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDGSIKAPEAI 82
           S P  + +S + LL+NICNLVS+RLDS+N+VLW+FQ++ +LK+HKL+ ++DGS   P   
Sbjct: 5   SQPPKDLSSPIFLLSNICNLVSLRLDSSNFVLWKFQLTAILKAHKLYGFIDGSTPKPAEF 64

Query: 83  V-----RVEGQPPRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEVWDRLEK 142
           +          PP  NP F  W  +D AL+TL+NA L+ +AL+YV+GC +S++VW  L K
Sbjct: 65  LVSXXDXSSSXPPAANPAFSEWIAKDHALMTLLNAXLSSSALAYVVGCDSSQQVWQTLVK 124

Query: 143 HFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDLIIYTVN 201
           H+SSS+RTN+V LK++LQS+S K G ++D YV+RIKE+ +KLA V V++D+EDL+IYT+N
Sbjct: 125 HYSSSSRTNVVNLKSDLQSISKKPGXSIDXYVQRIKELKDKLANVXVLVDNEDLLIYTLN 184

[Close]

BLAST of Lag0021075 vs. ExPASy TrEMBL
Match: A0A6J1D9L6 (uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018892 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 7.4e-46
Identity = 98/187 (52.41%), Postives = 139/187 (74.33%), Query Frame = 0


Query: 23  SNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDGSIKAPEAI 82
           +N   + +S + LL+NICNLVS+RLDST+++LW+FQ++ +LK+HKLF ++DGS+ AP   
Sbjct: 27  TNTKKDLHSPIFLLSNICNLVSIRLDSTDFILWKFQLTAILKAHKLFGFIDGSVSAPSQF 86

Query: 83  V----RVEGQP------PRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEVW 142
           +      E QP      P INP FE W  +DQAL+TLINATL+  AL+YV+   TSK+VW
Sbjct: 87  LASSSETESQPTTTTSLPVINPHFEDWIAKDQALMTLINATLSAEALAYVVRSGTSKQVW 146

Query: 143 DRLEKHFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDLI 200
           + LEKH+SS++RTN+V LK++LQS+  K+ E++D YV+RIKEI +K A VS+ I+ E L+
Sbjct: 147 EVLEKHYSSNSRTNVVNLKSDLQSIVKKTEESIDAYVKRIKEIKDKFANVSITINDEYLL 206

[Close]

BLAST of Lag0021075 vs. ExPASy TrEMBL
Match: A0A5D3CLI6 (T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43
Identity = 94/190 (49.47%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 15  SSSESALISNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDG 74
           SSS +   S+   +S S + LL+NICNL+S+RLDSTN+VLW+FQ++ +LK+HKL+ ++DG
Sbjct: 2   SSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDG 61

Query: 75  SIKAPEAIVRVEGQ---PPRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEV 134
           +   P            PP+ NP +E W  +DQAL+T+INATL+  AL+YV+G  +SK+V
Sbjct: 62  TNPCPPRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQV 121

Query: 135 WDRLEKHFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDL 194
           WD L K +SS +R+N+V LK++LQ++  K  E++D Y++RIKEI +KLA VS  I+ EDL
Sbjct: 122 WDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDL 181

Query: 195 IIYTVNGLPS 202
           +IY +NGLP+
Sbjct: 182 LIYALNGLPN 191

[Close]

BLAST of Lag0021075 vs. ExPASy TrEMBL
Match: A0A1S3BI58 (uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43
Identity = 94/190 (49.47%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 15  SSSESALISNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDG 74
           SSS +   S+   +S S + LL+NICNL+S+RLDSTN+VLW+FQ++ +LK+HKL+ ++DG
Sbjct: 2   SSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDG 61

Query: 75  SIKAPEAIVRVEGQ---PPRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEV 134
           +   P            PP+ NP +E W  +DQAL+T+INATL+  AL+YV+G  +SK+V
Sbjct: 62  TNPCPPRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQV 121

Query: 135 WDRLEKHFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDL 194
           WD L K +SS +R+N+V LK++LQ++  K  E++D Y++RIKEI +KLA VS  I+ EDL
Sbjct: 122 WDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDL 181

Query: 195 IIYTVNGLPS 202
           +IY +NGLP+
Sbjct: 182 LIYALNGLPN 191

[Close]

BLAST of Lag0021075 vs. ExPASy TrEMBL
Match: A0A1S4DWT9 (uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490319 PE=4 SV=1)

HSP 1 Score: 185.7 bits (470), Expect = 2.0e-43
Identity = 94/190 (49.47%), Postives = 138/190 (72.63%), Query Frame = 0


Query: 15  SSSESALISNPSSNSNSSVSLLNNICNLVSVRLDSTNYVLWRFQISPLLKSHKLFKYVDG 74
           SSS +   S+   +S S + LL+NICNL+S+RLDSTN+VLW+FQ++ +LK+HKL+ ++DG
Sbjct: 2   SSSTTLPSSSAEKDSLSPIFLLSNICNLISMRLDSTNFVLWKFQLTAILKAHKLYGFIDG 61

Query: 75  SIKAPEAIVRVEGQ---PPRINPEFEVWYERDQALITLINATLTQTALSYVIGCQTSKEV 134
           +   P            PP+ NP +E W  +DQAL+T+INATL+  AL+YV+G  +SK+V
Sbjct: 62  TNPCPPRTNNSSSTSTVPPQSNPSYEDWIAKDQALMTVINATLSPEALAYVVGSTSSKQV 121

Query: 135 WDRLEKHFSSSTRTNIVGLKTELQSVSMKSGETVDVYVRRIKEIVNKLAAVSVIIDSEDL 194
           WD L K +SS +R+N+V LK++LQ++  K  E++D Y++RIKEI +KLA VS  I+ EDL
Sbjct: 122 WDVLAKLYSSGSRSNVVNLKSDLQTIYKKPDESIDAYIKRIKEIKDKLANVSTFINEEDL 181

Query: 195 IIYTVNGLPS 202
           +IY +NGLP+
Sbjct: 182 LIYALNGLPN 191

The following BLAST results are available for this feature:

BLAST of Lag0021075 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158689.1	3.1e-46	51.37	uncharacterized protein LOC111025150 [Momordica charantia]	[more]
XP_022150845.1	1.5e-45	52.41	uncharacterized protein LOC111018892 [Momordica charantia]	[more]
KAG6588985.1	9.9e-45	51.87	Retrovirus-related Pol polyprotein from transposon RE1, partial [Cucurbita argyr...	[more]
KAG7015254.1	9.9e-45	51.87	hypothetical protein SDJN02_22888, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAE8645659.1	4.9e-44	51.06	hypothetical protein Csa_020439 [Cucumis sativus]	[more]

BLAST of Lag0021075 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	1.8e-12	24.56	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	2.0e-08	25.62	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	4.5e-08	26.53	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]

BLAST of Lag0021075 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1E049	1.5e-46	51.37	uncharacterized protein LOC111025150 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1D9L6	7.4e-46	52.41	uncharacterized protein LOC111018892 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5D3CLI6	2.0e-43	49.47	T4.5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold106G001120 PE=4 SV=...	[more]
A0A1S3BI58	2.0e-43	49.47	uncharacterized protein LOC103490319 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S4DWT9	2.0e-43	49.47	uncharacterized protein LOC103490319 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]

BLAST of Lag0021075 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029472	Retrotransposon Copia-like, N-terminal	PFAM	PF14244	Retrotran_gag_3	coord: 41..80 e-value: 1.0E-8 score: 34.8
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 99..201 e-value: 3.7E-20 score: 72.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR47481	FAMILY NOT NAMED	coord: 28..200
None	No IPR available	PANTHER	PTHR47481:SF3	GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATED	coord: 28..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0021075.1	Lag0021075.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005488	binding