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Lag0020956 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCACAACCCACTCTCTTCTTCCTTCTTTCCTTCCTCCTTCCACTTGTTTTCCTGCAAACCCATTTCTCTTTCAGCTATGCGATTCTTGATCTCAGATCTTTGAAGGGCAGCCAAATCGATTTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGCGAGTGCCTAACTGAGCCAGAAATGGAATCAGAAATCAGTAGGAGAGTTTTGATGATGCAGAAGAAGTATATAAGCTACGAAACACTTAAGAGAGACATGGTTCCTTGTTCAAGACCTGGCGTTTCTTATTATGAATGCTATTCTGGTCCAGCAAATTCTTATAACAGAGGCTGCGAGGTCATTACCAGATGTGCTAGAGATGTGCACGATATAAACAATTGA ATGGCACAACCCACTCTCTTCTTCCTTCTTTCCTTCCTCCTTCCACTTGTTTTCCTGCAAACCCATTTCTCTTTCAGCTATGCGATTCTTGATCTCAGATCTTTGAAGGGCAGCCAAATCGATTTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGCGAGTGCCTAACTGAGCCAGAAATGGAATCAGAAATCAGTAGGAGAGTTTTGATGATGCAGAAGAAGTATATAAGCTACGAAACACTTAAGAGAGACATGGTTCCTTGTTCAAGACCTGGCGTTTCTTATTATGAATGCTATTCTGGTCCAGCAAATTCTTATAACAGAGGCTGCGAGGTCATTACCAGATGTGCTAGAGATGTGCACGATATAAACAATTGA ATGGCACAACCCACTCTCTTCTTCCTTCTTTCCTTCCTCCTTCCACTTGTTTTCCTGCAAACCCATTTCTCTTTCAGCTATGCGATTCTTGATCTCAGATCTTTGAAGGGCAGCCAAATCGATTTAATGGCAAAAGGGGTTTGCAATCAGAAGATCGGCGAGTGCCTAACTGAGCCAGAAATGGAATCAGAAATCAGTAGGAGAGTTTTGATGATGCAGAAGAAGTATATAAGCTACGAAACACTTAAGAGAGACATGGTTCCTTGTTCAAGACCTGGCGTTTCTTATTATGAATGCTATTCTGGTCCAGCAAATTCTTATAACAGAGGCTGCGAGGTCATTACCAGATGTGCTAGAGATGTGCACGATATAAACAATTGA MAQPTLFFLLSFLLPLVFLQTHFSFSYAILDLRSLKGSQIDLMAKGVCNQKIGECLTEPEMESEISRRVLMMQKKYISYETLKRDMVPCSRPGVSYYECYSGPANSYNRGCEVITRCARDVHDINN Homology
BLAST of Lag0020956 vs. NCBI nr
Match: KAG6582492.1 (Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018876.1 Protein RALF-like 24, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 228.8 bits (582), Expect = 2.6e-56 Identity = 111/125 (88.80%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of Lag0020956 vs. NCBI nr
Match: XP_023526933.1 (protein RALF-like 24 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 228.8 bits (582), Expect = 2.6e-56 Identity = 111/125 (88.80%), Postives = 118/125 (94.40%), Query Frame = 0
BLAST of Lag0020956 vs. NCBI nr
Match: XP_022974738.1 (protein RALF-like 24 [Cucurbita maxima]) HSP 1 Score: 228.4 bits (581), Expect = 3.4e-56 Identity = 110/125 (88.00%), Postives = 119/125 (95.20%), Query Frame = 0
BLAST of Lag0020956 vs. NCBI nr
Match: XP_038875978.1 (protein RALF-like 24 [Benincasa hispida] >XP_038875986.1 protein RALF-like 24 [Benincasa hispida] >XP_038875991.1 protein RALF-like 24 [Benincasa hispida] >XP_038876000.1 protein RALF-like 24 [Benincasa hispida] >XP_038876008.1 protein RALF-like 24 [Benincasa hispida]) HSP 1 Score: 225.3 bits (573), Expect = 2.9e-55 Identity = 109/125 (87.20%), Postives = 116/125 (92.80%), Query Frame = 0
BLAST of Lag0020956 vs. NCBI nr
Match: XP_022146989.1 (protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146990.1 protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146991.1 protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146992.1 protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146993.1 protein RALF-like 24 isoform X1 [Momordica charantia] >XP_022146994.1 protein RALF-like 24 isoform X1 [Momordica charantia]) HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52 Identity = 105/125 (84.00%), Postives = 116/125 (92.80%), Query Frame = 0
BLAST of Lag0020956 vs. ExPASy Swiss-Prot
Match: Q9LK37 (Protein RALF-like 24 OS=Arabidopsis thaliana OX=3702 GN=RALFL24 PE=3 SV=1) HSP 1 Score: 122.1 bits (305), Expect = 4.5e-27 Identity = 67/111 (60.36%), Postives = 79/111 (71.17%), Query Frame = 0
BLAST of Lag0020956 vs. ExPASy Swiss-Prot
Match: Q2HIM9 (Protein RALF-like 31 OS=Arabidopsis thaliana OX=3702 GN=RALFL31 PE=3 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.7e-24 Identity = 56/87 (64.37%), Postives = 66/87 (75.86%), Query Frame = 0
BLAST of Lag0020956 vs. ExPASy Swiss-Prot
Match: Q9MA62 (Protein RALF-like 22 OS=Arabidopsis thaliana OX=3702 GN=RALFL22 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.2e-15 Identity = 42/76 (55.26%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of Lag0020956 vs. ExPASy Swiss-Prot
Match: Q945T0 (Rapid alkalinization factor OS=Nicotiana tabacum OX=4097 GN=RALF PE=1 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 4.4e-14 Identity = 41/76 (53.95%), Postives = 50/76 (65.79%), Query Frame = 0
BLAST of Lag0020956 vs. ExPASy Swiss-Prot
Match: Q8L9P8 (Protein RALF-like 33 OS=Arabidopsis thaliana OX=3702 GN=RALFL33 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 5.7e-14 Identity = 51/110 (46.36%), Postives = 63/110 (57.27%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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