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Lag0020944 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGGCGCCGCCGCCTCTGCTCCGGCAAGTGCACCGACGGCGGCAACGAAGTTCGTTAAGTGTGTGACTATTGGAGATGGCGCCGTTGGAAAGACCTGCCTTCTCATTTCTTACACTAGCAACACTTTTCCGACTGTATGGACTCTTATTTTTTGAATGTTGTGTTTGATTTGCCATTTTCGCTTGTTTTCTTGGATTTTCTAGCATATCTGAAACAAAGAAGAAGGAATTCTTGGTTTGGTGATGGTGTATTTTGTTTTGGCAGGATTATGTTCCTACTGTGTTTGACAATTTCAGCGCCAATGTTTTGGTTAATGTGTCTGTGAATTTGGGTCTCTGGGACACTGCTGGTGATTTCTTTTTCCTCTGTTTGTATCCAGTTTTGTTATTAAATTGTTGGTATTTTGTGTTCATGAATTTCTATATTTTCATCTGTTTGAGCTTAAAGCTAATTGTCTCTACTCGCCACTTCCAATGAAGTATCAAAACCTTAACATCTAACAAGTGGAGTAACGTTTTAGGAGATTTAACCAAACTACAAGACATATGAAGCCTTTAAGATCATAGGATTGAATTGAAACCAAACGCAAACTAAAATCACTATTGGACTAAAATTGTAGTTCAACCAACGTATTACAATCTTATCATTCAAGTTTTCTTCTGATAGAAAAAAATCTCATGTGTCATCAATAGCTTTAGGATATGGATATCTGAAAAGGTTATATCAAGTATACTTACAGGAAATTAAGATGAACTTTAGAATGAAACTATATTTTGACGTTATTGTTCTCACTTCTCAGAATATGTGTTCCGAATCTGTTCTGTTCAAAAGCTACTCCACAAATTGTTTCATATTGTTCTTCACTTGTTTCTTTTTTTAATTACAACACCAGTTTAGGTTTCTTTTTTTTTTCCTCTTATGTTATTGGTATAATTGGAAATGTAGTGGAAATATAGAGAACAATAGTCCTTGTTCTGAAGGCACTTGATGGCATAGTATCTTCCAGAAATACCACTATGAATGTTGGAAAGCTTGATAGACAATCATAACTTCAAATTCCAGTTAAAAATGGATACCCCAGTCTTTAACAAAAAGATATGGCCACTAGTTTGTCATGTATCAGGTTAAGATAACATCAACTGTGCAACTAATATGATACCAAAGTGGTGTATGAATTTTAAGAGGATCCCTTTACAGGTCAAGAAGATTATAACAGGCTAAGACCTTTGAGTTACAGAGGAGCTGATGTTTTCCTTCTTGCCTTTTCCCTCATAAGTAGGGCCAGCTTTGAAAATGTATCAAAGAAAGTAAGTTCATTTCCTGCTCATTCTTTGGAATGTTTATTATTTTGGTTCAGTGTTATGGTATTTAGATTCTTCTTCATGTCTTTTTCTTTTGGAGCAGTGGATCCCAGAGTTAAGGCATTATGCCCCATCAGTGCCCATTATTCTTGTAGGGACCAAACTAGGTGCCTTTCTTCTTTAACTTTAATTTCATTGCCTGCATTATCGATTCCTTCACTCTTAAGTAAATTTCTCATAATTTTTATGGGCTGGTATAAGAATACACATCCGCGGATGGAAAAATCTTTCTTAACTTTTCACGGACACCATCAGATCAAAATGTGTGTTTCAACGTCCTTTAATCAGAGATCAACTTCACATGATATCAAAAAAATTGTACTATGCAAAACGATGCCTGTTCATGTCTCTAAAACATGTATCTTTCATTGTTCTGTAATTTCTAGGGGAAGATTATTCTTGAAGCTCCTACTCGTCCCCCATCCGCCCCTACCCTTGTTCCTCAAATCTGTTTTTTGCATTCTGTGGTATTGTTCTGATTGAAAGTCCTATGCTATTACTTGGGATGGCAGATCTGAGAGACGACAAACAATTCCTCTTGGACTATCCTGGGGCACGTATAATATCGACGAAACAGGTAAACATTTGGAACTATTTCATTTTCCTTTCGACTCTTGTTTTCGCTTCTGCTAGCCACCAATTAGAACTGCTAGTTCTCATTTGGAGTTTACACGATGTTGGTTCCACACTGGGCTGTCATAGAATGTATTGGATTCTCTGTGTTACACATAATGTTCCCTTTCTCCAAGTTTTTATGGAAAACAAGTTTACAAAATCCTTTTTTTTTTTCAGGGTGAGGAACTAAAGAAGCTTATTGGAGCAGTGGCATATGTTGAGTGCAGTTCAAAGACTCAACAGGTTGGTAATTATCATCTCTTAATATATTATAAGCAAAAGTATAAGCTGTAATTTTCAAAACCTGATTAAGAGCAAATGTAAAAAAGGCCTCCATCAATCAAACATTGAAGGGCTTATTGTTGCGAAGTGTGAAAATCAAGAACTAACCCCAAGGGTGCAAGTCAAAATTGAAAAGGCCTACGAAATTAACCAAACCAACTTGGTTGGTTTGAACTTCACTTATTGGATAGTTCGATTTTCTAAACTATAAAATCAAAAAATGGTTGGCATTTTGGTTTAGATAATCCATCGATTTTTCAATCAAATGTCTATTTGGTCCCTGAATTTTTAGGTTTCTGTCTATTTGGTTCTTGAACTTCAAGATGTGTCATGTAATAGATTCATGAACTTTCATATTTGTGTCTATTTATTTATTGAACTTTTAAAGTGTCTAATAGGTCCTCCAATTTTTAATTTTGTGTCCAATAGTTCCCTAAATTTTTAATTTGGTCCCCAATAGGTCCTTCAACACTTCTTCAAATTCATGGACCTACTAGACACAAAATTGAAAGTTTAAGGTTTTATTAGATATTAAATTTAATTTTATATCTAATAGATCAATTAATTTTAATAATTTTCGAATATTCTAGGAACATATTAGATACAAAATTGAAAATATAAAGATCTATTAAACATTTTTTAAAGTTCAAGGACCTATTAGACACAAAATTGAAAGTTTAGGGTTCAATAGATACAAACCCGAAACTTCATAAACCAATTTTTTAAGATCATATCCCAACAACACCATTTTTATTGTGCATGACTGCATGGATGAGCCCAAGGGGACAAACTTTTAAGTGAAGTTGAAGGGACTTGTGAACCCTTTCTCTAACTTTTGGGCTTTTTTCTCCTGTTTTGAAGCCAAAGATAATAGTCATTAAGGTGTTCTTAGTCAGTGCTAAGTGAACTTTTTGGAAATGCAGAATGTAAAGGCTGTCTTTGATGCTGCAATTAAGGTGGTTCTTCAACCTCCAAAACTCAAGAAGCCAAAGAGAAAACATTCCATCTGCAATATTCTCTAA ATGGCCGGCGCCGCCGCCTCTGCTCCGGCAAGTGCACCGACGGCGGCAACGAAGTTCGTTAAGTGTGTGACTATTGGAGATGGCGCCGTTGGAAAGACCTGCCTTCTCATTTCTTACACTAGCAACACTTTTCCGACTGATTATGTTCCTACTGTGTTTGACAATTTCAGCGCCAATGTTTTGGTTAATGTGTCTGTGAATTTGGGTCTCTGGGACACTGCTGGTCAAGAAGATTATAACAGGCTAAGACCTTTGAGTTACAGAGGAGCTGATGTTTTCCTTCTTGCCTTTTCCCTCATAAGTAGGGCCAGCTTTGAAAATGTATCAAAGAAATGGATCCCAGAGTTAAGGCATTATGCCCCATCAGTGCCCATTATTCTTGTAGGGACCAAACTAGATCTGAGAGACGACAAACAATTCCTCTTGGACTATCCTGGGGCACGTATAATATCGACGAAACAGGGTGAGGAACTAAAGAAGCTTATTGGAGCAGTGGCATATGTTGAGTGCAGTTCAAAGACTCAACAGAATGTAAAGGCTGTCTTTGATGCTGCAATTAAGGTGGTTCTTCAACCTCCAAAACTCAAGAAGCCAAAGAGAAAACATTCCATCTGCAATATTCTCTAA ATGGCCGGCGCCGCCGCCTCTGCTCCGGCAAGTGCACCGACGGCGGCAACGAAGTTCGTTAAGTGTGTGACTATTGGAGATGGCGCCGTTGGAAAGACCTGCCTTCTCATTTCTTACACTAGCAACACTTTTCCGACTGATTATGTTCCTACTGTGTTTGACAATTTCAGCGCCAATGTTTTGGTTAATGTGTCTGTGAATTTGGGTCTCTGGGACACTGCTGGTCAAGAAGATTATAACAGGCTAAGACCTTTGAGTTACAGAGGAGCTGATGTTTTCCTTCTTGCCTTTTCCCTCATAAGTAGGGCCAGCTTTGAAAATGTATCAAAGAAATGGATCCCAGAGTTAAGGCATTATGCCCCATCAGTGCCCATTATTCTTGTAGGGACCAAACTAGATCTGAGAGACGACAAACAATTCCTCTTGGACTATCCTGGGGCACGTATAATATCGACGAAACAGGGTGAGGAACTAAAGAAGCTTATTGGAGCAGTGGCATATGTTGAGTGCAGTTCAAAGACTCAACAGAATGTAAAGGCTGTCTTTGATGCTGCAATTAAGGTGGTTCTTCAACCTCCAAAACTCAAGAAGCCAAAGAGAAAACATTCCATCTGCAATATTCTCTAA MAGAAASAPASAPTAATKFVKCVTIGDGAVGKTCLLISYTSNTFPTDYVPTVFDNFSANVLVNVSVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASFENVSKKWIPELRHYAPSVPIILVGTKLDLRDDKQFLLDYPGARIISTKQGEELKKLIGAVAYVECSSKTQQNVKAVFDAAIKVVLQPPKLKKPKRKHSICNIL Homology
BLAST of Lag0020944 vs. NCBI nr
Match: XP_023527852.1 (rac-like GTP-binding protein 5 [Cucurbita pepo subsp. pepo] >KAG6582498.1 Rac-like GTP-binding protein 7, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018883.1 Rac-like GTP-binding protein 7 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 372.5 bits (955), Expect = 2.4e-99 Identity = 188/209 (89.95%), Postives = 198/209 (94.74%), Query Frame = 0
BLAST of Lag0020944 vs. NCBI nr
Match: XP_022980411.1 (rac-like GTP-binding protein 5 [Cucurbita maxima]) HSP 1 Score: 372.5 bits (955), Expect = 2.4e-99 Identity = 188/209 (89.95%), Postives = 198/209 (94.74%), Query Frame = 0
BLAST of Lag0020944 vs. NCBI nr
Match: XP_022924269.1 (rac-like GTP-binding protein 5 [Cucurbita moschata]) HSP 1 Score: 368.6 bits (945), Expect = 3.5e-98 Identity = 186/209 (89.00%), Postives = 197/209 (94.26%), Query Frame = 0
BLAST of Lag0020944 vs. NCBI nr
Match: XP_022147127.1 (rac-like GTP-binding protein 5 isoform X1 [Momordica charantia]) HSP 1 Score: 367.9 bits (943), Expect = 6.0e-98 Identity = 185/200 (92.50%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Lag0020944 vs. NCBI nr
Match: XP_038878037.1 (rac-like GTP-binding protein 5 [Benincasa hispida]) HSP 1 Score: 365.9 bits (938), Expect = 2.3e-97 Identity = 188/209 (89.95%), Postives = 195/209 (93.30%), Query Frame = 0
BLAST of Lag0020944 vs. ExPASy Swiss-Prot
Match: Q39435 (Rac-like GTP-binding protein RHO1 OS=Beta vulgaris OX=161934 GN=RHO1 PE=2 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 6.2e-90 Identity = 163/196 (83.16%), Postives = 181/196 (92.35%), Query Frame = 0
BLAST of Lag0020944 vs. ExPASy Swiss-Prot
Match: Q6EP31 (Rac-like GTP-binding protein 5 OS=Oryza sativa subsp. japonica OX=39947 GN=RAC5 PE=2 SV=2) HSP 1 Score: 330.9 bits (847), Expect = 1.1e-89 Identity = 162/188 (86.17%), Postives = 178/188 (94.68%), Query Frame = 0
BLAST of Lag0020944 vs. ExPASy Swiss-Prot
Match: Q38902 (Rac-like GTP-binding protein ARAC1 OS=Arabidopsis thaliana OX=3702 GN=ARAC1 PE=1 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 5.3e-89 Identity = 161/196 (82.14%), Postives = 180/196 (91.84%), Query Frame = 0
BLAST of Lag0020944 vs. ExPASy Swiss-Prot
Match: O04369 (Rac-like GTP-binding protein RAC1 OS=Lotus japonicus OX=34305 GN=RAC1 PE=2 SV=1) HSP 1 Score: 328.2 bits (840), Expect = 6.9e-89 Identity = 163/196 (83.16%), Postives = 181/196 (92.35%), Query Frame = 0
BLAST of Lag0020944 vs. ExPASy Swiss-Prot
Match: Q38912 (Rac-like GTP-binding protein ARAC3 OS=Arabidopsis thaliana OX=3702 GN=ARAC3 PE=1 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 9.0e-89 Identity = 162/197 (82.23%), Postives = 182/197 (92.39%), Query Frame = 0
BLAST of Lag0020944 vs. ExPASy TrEMBL
Match: A0A6J1ITI8 (rac-like GTP-binding protein 5 OS=Cucurbita maxima OX=3661 GN=LOC111479785 PE=3 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 1.2e-99 Identity = 188/209 (89.95%), Postives = 198/209 (94.74%), Query Frame = 0
BLAST of Lag0020944 vs. ExPASy TrEMBL
Match: A0A6J1E8N6 (rac-like GTP-binding protein 5 OS=Cucurbita moschata OX=3662 GN=LOC111431794 PE=3 SV=1) HSP 1 Score: 368.6 bits (945), Expect = 1.7e-98 Identity = 186/209 (89.00%), Postives = 197/209 (94.26%), Query Frame = 0
BLAST of Lag0020944 vs. ExPASy TrEMBL
Match: A0A6J1D1I3 (rac-like GTP-binding protein 5 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016135 PE=3 SV=1) HSP 1 Score: 367.9 bits (943), Expect = 2.9e-98 Identity = 185/200 (92.50%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Lag0020944 vs. ExPASy TrEMBL
Match: A0A0A0L9A9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G129580 PE=3 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 4.2e-97 Identity = 181/200 (90.50%), Postives = 190/200 (95.00%), Query Frame = 0
BLAST of Lag0020944 vs. ExPASy TrEMBL
Match: A0A5D3D3I7 (Rac-like GTP-binding protein RAC2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003030 PE=3 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 1.6e-96 Identity = 181/200 (90.50%), Postives = 189/200 (94.50%), Query Frame = 0
BLAST of Lag0020944 vs. TAIR 10
Match: AT2G17800.1 (Arabidopsis RAC-like 1 ) HSP 1 Score: 328.6 bits (841), Expect = 3.7e-90 Identity = 161/196 (82.14%), Postives = 180/196 (91.84%), Query Frame = 0
BLAST of Lag0020944 vs. TAIR 10
Match: AT2G17800.2 (Arabidopsis RAC-like 1 ) HSP 1 Score: 328.6 bits (841), Expect = 3.7e-90 Identity = 161/196 (82.14%), Postives = 180/196 (91.84%), Query Frame = 0
BLAST of Lag0020944 vs. TAIR 10
Match: AT4G35020.1 (RAC-like 3 ) HSP 1 Score: 327.8 bits (839), Expect = 6.4e-90 Identity = 162/197 (82.23%), Postives = 182/197 (92.39%), Query Frame = 0
BLAST of Lag0020944 vs. TAIR 10
Match: AT4G35020.2 (RAC-like 3 ) HSP 1 Score: 327.8 bits (839), Expect = 6.4e-90 Identity = 162/197 (82.23%), Postives = 182/197 (92.39%), Query Frame = 0
BLAST of Lag0020944 vs. TAIR 10
Match: AT4G35020.3 (RAC-like 3 ) HSP 1 Score: 327.8 bits (839), Expect = 6.4e-90 Identity = 162/197 (82.23%), Postives = 182/197 (92.39%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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