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Lag0020941 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCACTTCCAAGGATCCGGCGCCGCCGTACGCCAGTGCTGCTAGAATTTCTGATTCTCCTTGCTATCCTCAGTACAGCGCTTCCTTGAAATGTAGGTTCTCTCTCATACTCCCTTTCCATTGTTCTTTTTCGTTTTTCTTTGATTCTCCGCCAGTGATTTACGTTTCTGTGCTACCATTTCATCATTTGAACTTATTCTACACTGGTTCACTCATGAATGATTGCGTGCCGTGCATCAATTTTTTTTCAGTTTGTTTTCTGATAGTTGAACTCGCGAATTTATTGTTGGCGATGATGATGAAAACTCTAATTTTCGTGGCGGTTCTCTATGGTCTGTTAGTTGAGTGATTGGTTTGCCTGTTTTATTTTCTTTTCTAGGGATACTATTTTCATTTACTTTGGTTCTTGAAGAGTAAGCAAACTTAAATGCGTTAGTGATTGGATGATGATATTACAAAAGAAAAGGGGATTGCTAGGGTATTGTTGAATTTGATGGACACGTCGTGAGAGTTCTTAGAGTGGCTGTGTTTGAGTTCACTTACTGTTCTAACTTCTAACAATGACAATAGTGGAAAAGGAACTTTTACTAGGATTTTGAAGCCGAAAGATCTTAATACCCCGCTCCTGAGGGCCAAGTTATAATTTAAAATATCAAAGTAGGAATTACTTAGTTTGATGGTTCTTCTGCTCCAAAACTTTTTTAGTTGTCATTCGACATCGGCAATCCAATTCATTTTCTGGCCCATTCTTAGAGCTAGATTCACGAGAGAGTTTTAACTGTTGGAGGTTCCTGTGTGTGTTTTGATTTATGATTAAGGATAACACTATATATGGACACAATAATTTTCTGAAAGACAGCTAAGACAGAAGCCTCGAGCTGCAACTTAAGGCTACGACAATTTTTTTAGCCTCGAGGCTTATGCATTCTTATCTAAAGCTTTAAGATTGTGCCTTACAGATTGTTTTCAAAAAGCATGCACAGTTGGTAATAGCTGATAAATCATGTGTAAAAGAGAAATCTTAATTTGAATTTTTAAACGAGTACTATCGTTACTGATCTTGTTGAAGTGCAGCTTAATCTTTGGTGTTTTATGAGTCACTTGACGAGAAGTTGGTAGTCAAATTACTAAGGCTCCGTTTGGTAATTATTTGGTTTTAGAAAATTAAACTTTATCAGCACCTTCCACCCATGAGTTTCTTTGTTTTTGTTATCTACTTTTGACAAATGTTTTCAAAATCCAAACCAAGTTTTGAAAACTAAAAAAAGTGGTTTTTAAAAACTTGTTTTTGTTTTTTAAATTTGACTTAGAATTCAATTGTTACCTTAAGAAAGATGAAAATCATTGTAAAGAAATTGCAATGAAGCAAGAAAAGTTTTTTAAAAGCCAAATGGTTATCAAACGGGGCCTAATTTTGTCAATTTGGAATTTCATTTTACTTCCTTCAATTTAGAATTATGTCAGGGAACGTTTTGAACTTATCAGAGAAAATCTTCTTTTGCAAATGCTCAATAGGTCTTGAAGAAAATAGCTCAGAGAAGAGCAAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAAAAAGAGGTATTTTCTCTCTTAGTTAACTCATGAAAATTGAAGGGGTGGCTTAGAACATTTTGTCGTGTGTGATACTGTTACTGAAAGCATATGCTCAAAATTTATGGGAATTTGACTTAAACTGAGATGCTGGTACATTAACTAACCGAGGCTGTACTTGTCCTGATTTTACCTTTACCGGTTGTATAAATTGTTCTGTATTTTGCCTCTTGGAGTCTGCTCATTTGCTTGAGGCGTTAATGGATCAAGGACATTCAAAGTCCTCATCTCATTTGGGCATCATTGGATGACCTATATATATGTTATATATGCACCACGTTTGTCTTTGAGTTAATTTTGTGCTCAATCTTAAAGGATAGGTTAAAATATGATTTTGGTCGTCACGGTTTAAAATGTTCTATTTTGATCTTTCAAGTTTAAAAACTCATTTTCTGATATCTCTTAGTTCAAATGCATAAAATTTTCTAGGAAGACATTTATAATCTTTCAACTTCTTTCATTCTGACTATTGAATTGAACATGCTTCAATTTTATGTTTTCTTGATTTCTATGCAAGTGATGTATAACATGTCTATGTTGTCTCTTCCATGTGATGAACTATTATTAACTATATGTTGATGTTTATCGGCCACAAAATAGAATACCATTTCTGTCTATAATTCTTTTGACTCGTATGGTGGGAATTTGAAATTATTGAAACTTGAGGGTCTAAAATAGAACTTTTTGATCGTTGAAATTAAAATTACACCATAACCTGAGAGATTTTATGGCATATAAGAGAAGTTTTATGTGATTCATGAAATTTTAAACCCTCCCTCTGCCTGCGTGTATTCTGCGAGAAACATTTTGCAAAGTGCTTCCATAACATTTATGAATTCTGTCTGGGTTTAGAAAATATAGTAATGTTTCATAGGCTGTAGGCTGTACTTTACTTCTCTGGTTGGTGTAGCATCATGCACCTATTTTTTATCAGACATTGCCTCCTGTTTACCAAGTTCCTAAATCGAACGAGTTCTGTCTCCTTTTCAGCGGGAAGCTCGATTGGAACGCAACAAGAAACGGTCTTTCTTCTCATGAAATTATCTTCATGGATTTTTCTAGATGTCGAAATATGTAA ATGGCTTCCACTTCCAAGGATCCGGCGCCGCCGTACGCCAGTGCTGCTAGAATTTCTGATTCTCCTTGCTATCCTCAGTACAGCGCTTCCTTGAAATGTCTTGAAGAAAATAGCTCAGAGAAGAGCAAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAAAAAGAGCATCATGCACCTATTTTTTATCAGACATTGCCTCCTGTTTACCAAGTTCCTAAATCGAACGAGTTCTGTCTCCTTTTCAGCGGGAAGCTCGATTGGAACGCAACAAGAAACGGTCTTTCTTCTCATGAAATTATCTTCATGGATTTTTCTAGATGTCGAAATATGTAA ATGGCTTCCACTTCCAAGGATCCGGCGCCGCCGTACGCCAGTGCTGCTAGAATTTCTGATTCTCCTTGCTATCCTCAGTACAGCGCTTCCTTGAAATGTCTTGAAGAAAATAGCTCAGAGAAGAGCAAATGTCAAGAACATTTTGATGTTTACAAGGAATGCAAGAAAAAAGAGCATCATGCACCTATTTTTTATCAGACATTGCCTCCTGTTTACCAAGTTCCTAAATCGAACGAGTTCTGTCTCCTTTTCAGCGGGAAGCTCGATTGGAACGCAACAAGAAACGGTCTTTCTTCTCATGAAATTATCTTCATGGATTTTTCTAGATGTCGAAATATGTAA MASTSKDPAPPYASAARISDSPCYPQYSASLKCLEENSSEKSKCQEHFDVYKECKKKEHHAPIFYQTLPPVYQVPKSNEFCLLFSGKLDWNATRNGLSSHEIIFMDFSRCRNM Homology
BLAST of Lag0020941 vs. NCBI nr
Match: KAA0049122.1 (cytochrome c oxidase-assembly factor COX23 [Cucumis melo var. makuwa] >TYK17441.1 cytochrome c oxidase-assembly factor COX23 [Cucumis melo var. makuwa]) HSP 1 Score: 115.2 bits (287), Expect = 3.8e-22 Identity = 57/61 (93.44%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of Lag0020941 vs. NCBI nr
Match: XP_038906947.1 (cytochrome c oxidase-assembly factor COX23, mitochondrial [Benincasa hispida]) HSP 1 Score: 113.2 bits (282), Expect = 1.4e-21 Identity = 55/61 (90.16%), Postives = 59/61 (96.72%), Query Frame = 0
BLAST of Lag0020941 vs. NCBI nr
Match: XP_022147041.1 (cytochrome c oxidase-assembly factor COX23, mitochondrial [Momordica charantia]) HSP 1 Score: 110.5 bits (275), Expect = 9.3e-21 Identity = 54/61 (88.52%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of Lag0020941 vs. NCBI nr
Match: XP_022924627.1 (cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucurbita moschata] >KAG6582500.1 hypothetical protein SDJN03_22502, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018885.1 hypothetical protein SDJN02_20758 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 110.2 bits (274), Expect = 1.2e-20 Identity = 53/61 (86.89%), Postives = 58/61 (95.08%), Query Frame = 0
BLAST of Lag0020941 vs. NCBI nr
Match: XP_004133972.1 (cytochrome c oxidase-assembly factor COX23, mitochondrial [Cucumis sativus] >KGN56698.1 hypothetical protein Csa_009870 [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 1.6e-20 Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0
BLAST of Lag0020941 vs. ExPASy Swiss-Prot
Match: P38824 (Cytochrome c oxidase-assembly factor COX23, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=COX23 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.7e-04 Identity = 19/36 (52.78%), Postives = 25/36 (69.44%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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