Lag0020936 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0020936
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionProtein OS-9
Locationchr7: 3261027 .. 3263335 (-)
RNA-Seq ExpressionLag0020936
SyntenyLag0020936
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAGTCAACAATTCTCAGAGAAATTCAAATCCGTTCAACACAGCGAAGCTCTTGCTGATTTTAGGTTTCATTTTCTCATTGCTTTCTAGCCATACAGTTCTCGCCAAATCTCGTCGTCCAGTCACTGTAAGTTTTCCGATCATTTCATCACTACCTGTTCGTCTTCTCGGATCGTTTTTGTCTTCATCTTCACTCGATTCTACTGAATCGCGTCAATTATTCAGGATGCTGAAACCAGGCAAAAGAAGCAGGAGTGTTACGCTGATATCGAGAGGCGAGCGTTTCTCTCAGTCTACTTCTAGGGTTTTTTTTTTTCCCCTTGCTCGAATTGAGTGTAGTTGTAAAATGACATGAGAGCAACTTTGGAATGTGATTTGTATTTCCTTCTTTTCAATCTTCCTGCTATTGATTTGGTTGGTTGCTATAATGTGTTGAAAATGTGCAGCGGCTTGTGGGGTTGGCAATGCAAATCTTCAAGTATTGAAAAGGAAAATTGTGCCCTACGATGTCTCTCTCCTACTTGTTATGATCTAGTTTATGGCAGTGATCCGGTGAGACGATTTTCTGCTTATTGTCCTGTGCTCGTAACTCAATCACTGTTGTTTTTTAATTGTTAAGTCTAACGTTGAGTTTGTGTTGATGTAGCTCGAGGAAGGAGAGAAGGATCTTGTTAGGAGTCAAGAGTATAAGTATTGTATCTATAAGTAAGTTCAGCATTTTTGTTCAATTTTCATTTTTCCAGAAGAGAAAGTTGAACATTTCTTATTTGTAGTATAGGCTTCCTTGTCCTCATAATGTCAACTTTTTTCAGCTTTAACTCGTAAACACATTGCTCCATATGTGATAAGTGGCTAACCCAAATCAAATTTAATGTTATTAGAATCTCTGCTAATAACTGTAAGCTGATTCGTTTTGCCTCCATACCTATAAATGAGATAGGAGATGAGTATCAAGCTCGTTGGTTGGTTGAATCAGTTTTATGGGTATTTAAAATAATCTGAAGAATTTTTGTTAAAATTTTTGAGTTTTGGAAATGTTTTCCAATAATTAATTTGTGCATTTTTTTAGGAGTATTAAATATTAATTTATGCACGAATCAAACTTAAATATGTGAAAAACTTGATATTATTGAAATTAGTATATTTTGTTAAAATTAGTGGGCAAATTAGCGAAAATTGACTAGAGGATAGAAATTGTAGCATTTATCTAAGTCTTGCGCGCGATGGAATTGAAAATTTTGGGTGAAAATTGATGGAATTGAAAATTTAGGGGTAAAAGTTGAATTTTTCCATAGAAATTTTATACATTTCCCGGTGGCTGCTCTCCCTTACCTTCTTTCCTCTGTCCACTTCATCCTCCAACCATTTGAATAGGAATTCGAAATCCATTTTTCTTGGTTCACTGGTTCATATGATGCGTTCTCAATCCAGTCTATAGATGCTACGTGCATGGAATAGAGATTTATTGTTAGGAGCTTTGACATCGGATATTGCATTCAATTGCCTTCGGATGGCTGGAAAGGATCTAGCCATTGCTTATTATATTCTAGTTGCTATTTAACTGGCGAGCTATGGTTTGTAAATCACTATACATATCTAATATCTTTTGAGTGCTACCATATCATAGATCTCCCAGCATGATTAGATCCGATTTCAAAATTTTAAACATTTGAGAGTCTAAATGGTATCCTATTGGATCTGCTTTCCCTTTTTGTGCTTAGAAGGAATGTAAGCAGCTCAGATGATTCTGATCATTAGTTTATAACCAGTTAGAGGACTTACTCTCTTTCTCTGGACCTTGTTGTCAAACATGTGTTTAATCATATGGGATATAGAGTGCTTGCATATGATGACCCTCATTCCCCAACACAATGCTTCCCAATGCTTCTCGTCTTATTTGCTTTCATTCTCTTCTCCTTTTGATTTTCTATGGAGTATTGTTAAGCTAGTGGAGTATTGTTTGTCTGATTGAGCTCTCTTAGTAGATAGTTTTCAACTACACGTCGTTTCAGTTAGGTTCGCATCTAGACGAGACGAGGGAAGAACAAACTTGCTGAAAGTACCATACAAGCATCTTGACCTACCTGATCACACATTTGCTTATCAATTATACTTCACTTTCAATTTGTATTTGGATTTGACCTATCATTTTTTAACCTTATAGACTTTCAGTATTTGGGACTTATTGAATTTAAAGCTTTGCAACAATTGGTTTGGAGAACCAGTTAAGGAGTGAAACTTTTGTTTGCTTGCAGGTTGTCAATGGGAGAGACTCTGGAGGGTATCAAGGGCTCCTTCGACTACTGA

mRNA sequence

ATGAAAGTCAACAATTCTCAGAGAAATTCAAATCCGTTCAACACAGCGAAGCTCTTGCTGATTTTAGGTTTCATTTTCTCATTGCTTTCTAGCCATACAGTTCTCGCCAAATCTCGTCGTCCAGTCACTGATGCTGAAACCAGGCAAAAGAAGCAGGAGTGTTACGCTGATATCGAGAGCGGCTTGTGGGGTTGGCAATGCAAATCTTCAAGTATTGAAAAGGAAAATTGTGCCCTACGATGTCTCTCTCCTACTTGTTATGATCTAGTTTATGGCAGTGATCCGCTCGAGGAAGGAGAGAAGGATCTTGTTAGGAGTCAAGAGTATAAGTATTGTATCTATAAGTTGTCAATGGGAGAGACTCTGGAGGGTATCAAGGGCTCCTTCGACTACTGA

Coding sequence (CDS)

ATGAAAGTCAACAATTCTCAGAGAAATTCAAATCCGTTCAACACAGCGAAGCTCTTGCTGATTTTAGGTTTCATTTTCTCATTGCTTTCTAGCCATACAGTTCTCGCCAAATCTCGTCGTCCAGTCACTGATGCTGAAACCAGGCAAAAGAAGCAGGAGTGTTACGCTGATATCGAGAGCGGCTTGTGGGGTTGGCAATGCAAATCTTCAAGTATTGAAAAGGAAAATTGTGCCCTACGATGTCTCTCTCCTACTTGTTATGATCTAGTTTATGGCAGTGATCCGCTCGAGGAAGGAGAGAAGGATCTTGTTAGGAGTCAAGAGTATAAGTATTGTATCTATAAGTTGTCAATGGGAGAGACTCTGGAGGGTATCAAGGGCTCCTTCGACTACTGA

Protein sequence

MKVNNSQRNSNPFNTAKLLLILGFIFSLLSSHTVLAKSRRPVTDAETRQKKQECYADIESGLWGWQCKSSSIEKENCALRCLSPTCYDLVYGSDPLEEGEKDLVRSQEYKYCIYKLSMGETLEGIKGSFDY
Homology
[Close]
BLAST of Lag0020936 vs. NCBI nr
Match: XP_023526484.1 (uncharacterized protein LOC111789973 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 257.3 bits (656), Expect = 7.1e-65
Identity = 118/131 (90.08%), Postives = 127/131 (96.95%), Query Frame = 0 

Query: 1   MKVNNSQRNSNPFNTAKLLLILGFIFSLLSSHTVLAKSRRPVTDAETRQKKQECYADIES 60
           M++NNSQRN NPFNT +LLLILGF+FSLLS+HTVLAKSRRPVTDAETRQKKQ+CYADIES
Sbjct: 1   MEINNSQRNPNPFNTVRLLLILGFVFSLLSTHTVLAKSRRPVTDAETRQKKQDCYADIES 60

Query: 61  GLWGWQCKSSSIEKENCALRCLSPTCYDLVYGSDPLEEGEKDLVRSQEYKYCIYKLSMGE 120
           GLWGWQCKSS+ EKENCALRCLSPTCYD+VYGSDPLEEGEKDL RSQEYKYCIYKLSMGE
Sbjct: 61  GLWGWQCKSSATEKENCALRCLSPTCYDIVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120

Query: 121 TLEGIKGSFDY 132
           +LEGIKGSFDY
Sbjct: 121 SLEGIKGSFDY 131

[Close]
BLAST of Lag0020936 vs. NCBI nr
Match: XP_022980443.1 (uncharacterized protein LOC111479810 [Cucurbita maxima])

HSP 1 Score: 256.1 bits (653), Expect = 1.6e-64
Identity = 118/131 (90.08%), Postives = 127/131 (96.95%), Query Frame = 0 

Query: 1   MKVNNSQRNSNPFNTAKLLLILGFIFSLLSSHTVLAKSRRPVTDAETRQKKQECYADIES 60
           M++NN+QRNSNP NT +LLLILGFIFSLLS+HTVLAKSRRPVTDAETRQKKQ+CYADIES
Sbjct: 1   MEINNAQRNSNPLNTVRLLLILGFIFSLLSTHTVLAKSRRPVTDAETRQKKQDCYADIES 60

Query: 61  GLWGWQCKSSSIEKENCALRCLSPTCYDLVYGSDPLEEGEKDLVRSQEYKYCIYKLSMGE 120
           GLWGWQCKSS+ EKENCALRCLSPTCYD+VYGSDPLEEGEKDL RSQEYKYCIYKLSMGE
Sbjct: 61  GLWGWQCKSSATEKENCALRCLSPTCYDIVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120

Query: 121 TLEGIKGSFDY 132
           +LEGIKGSFDY
Sbjct: 121 SLEGIKGSFDY 131

[Close]
BLAST of Lag0020936 vs. NCBI nr
Match: XP_022924279.1 (uncharacterized protein LOC111431806 [Cucurbita moschata])

HSP 1 Score: 253.4 bits (646), Expect = 1.0e-63
Identity = 117/131 (89.31%), Postives = 125/131 (95.42%), Query Frame = 0 

Query: 1   MKVNNSQRNSNPFNTAKLLLILGFIFSLLSSHTVLAKSRRPVTDAETRQKKQECYADIES 60
           M++NNS RNSNP NT + LLILGFIFSLLS+HTVLAKSRRPVTDAETRQKKQ+CYADIES
Sbjct: 1   MEINNSPRNSNPLNTVRFLLILGFIFSLLSTHTVLAKSRRPVTDAETRQKKQDCYADIES 60

Query: 61  GLWGWQCKSSSIEKENCALRCLSPTCYDLVYGSDPLEEGEKDLVRSQEYKYCIYKLSMGE 120
           GLWGWQCKSS+ EKENCALRCLSPTCYD+VYGSDPLEEGEKDL RSQEYKYCIYKLSMGE
Sbjct: 61  GLWGWQCKSSATEKENCALRCLSPTCYDIVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120

Query: 121 TLEGIKGSFDY 132
           +LEGIKGSFDY
Sbjct: 121 SLEGIKGSFDY 131

[Close]
BLAST of Lag0020936 vs. NCBI nr
Match: XP_038899863.1 (uncharacterized protein LOC120087079 [Benincasa hispida])

HSP 1 Score: 246.5 bits (628), Expect = 1.3e-61
Identity = 117/131 (89.31%), Postives = 122/131 (93.13%), Query Frame = 0 

Query: 1   MKVNNSQRNSNPFNTAKLLLILGFIFSLLSSHTVLAKSRRPVTDAETRQKKQECYADIES 60
           M+VNNS RNSN  N  K L+ILGFIF LLS+HTVLAKSRRPVTDAETRQKKQECYADIES
Sbjct: 1   MEVNNSPRNSNLLNKLKSLIILGFIFFLLSTHTVLAKSRRPVTDAETRQKKQECYADIES 60

Query: 61  GLWGWQCKSSSIEKENCALRCLSPTCYDLVYGSDPLEEGEKDLVRSQEYKYCIYKLSMGE 120
           GLWGWQCKSS+ EKENCALRCLSPTCYDLVYGSDPLEEGEKDL RSQEYKYCIYKLSMGE
Sbjct: 61  GLWGWQCKSSATEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120

Query: 121 TLEGIKGSFDY 132
           +LEGIKGSFDY
Sbjct: 121 SLEGIKGSFDY 131

[Close]
BLAST of Lag0020936 vs. NCBI nr
Match: XP_008438284.1 (PREDICTED: uncharacterized protein LOC103483444 [Cucumis melo] >KAA0049118.1 Protein OS-9 [Cucumis melo var. makuwa] >TYK17446.1 Protein OS-9 [Cucumis melo var. makuwa])

HSP 1 Score: 243.8 bits (621), Expect = 8.2e-61
Identity = 113/131 (86.26%), Postives = 123/131 (93.89%), Query Frame = 0 

Query: 1   MKVNNSQRNSNPFNTAKLLLILGFIFSLLSSHTVLAKSRRPVTDAETRQKKQECYADIES 60
           M+VNNS +NS   NT K L++LGFIFSLL++HTV+AKSRRPVTDAETRQKKQECYADIES
Sbjct: 1   MEVNNSSKNSKLLNTLKPLILLGFIFSLLTTHTVIAKSRRPVTDAETRQKKQECYADIES 60

Query: 61  GLWGWQCKSSSIEKENCALRCLSPTCYDLVYGSDPLEEGEKDLVRSQEYKYCIYKLSMGE 120
           GLWGWQC+SS+ EKENCALRCLSPTCYDLVYGSDPLEEGEKDL RSQEYKYCIYKLSMGE
Sbjct: 61  GLWGWQCRSSTTEKENCALRCLSPTCYDLVYGSDPLEEGEKDLARSQEYKYCIYKLSMGE 120

Query: 121 TLEGIKGSFDY 132
           +LEGIKGSFDY
Sbjct: 121 SLEGIKGSFDY 131

The following BLAST results are available for this feature:
BLAST of Lag0020936 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023526484.17.1e-6590.08uncharacterized protein LOC111789973 [Cucurbita pepo subsp. pepo][more]
XP_022980443.11.6e-6490.08uncharacterized protein LOC111479810 [Cucurbita maxima][more]
XP_022924279.11.0e-6389.31uncharacterized protein LOC111431806 [Cucurbita moschata][more]
XP_038899863.11.3e-6189.31uncharacterized protein LOC120087079 [Benincasa hispida][more]
XP_008438284.18.2e-6186.26PREDICTED: uncharacterized protein LOC103483444 [Cucumis melo] >KAA0049118.1 Pro... [more]
BLAST of Lag0020936 vs. NCBI nr
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR031985Protein of unknown function DUF4787PFAMPF16029DUF4787coord: 44..112
e-value: 6.2E-24
score: 83.9
IPR031985Protein of unknown function DUF4787PANTHERPTHR35455UNNAMED PRODUCTcoord: 17..131

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0020936.1Lag0020936.1mRNA