Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAATAATTCCAGCTACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCTACAATCGCAGAGTTGAAGCCAGGAGTTCTATCAGTGCACGAAGGGAGCGACACCAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCCGTCGAAGCTGTGCCTGTAGACCAAATCGACGCCGGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCTACAGACTTGGAGAAAGCCGAAGCCCAAATCGGAGTCGACGTGCACAGTGCCCTGAATGCTGCCCTTACAGGATAG mRNA sequence
ATGGTAATAATTCCAGCTACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCTACAATCGCAGAGTTGAAGCCAGGAGTTCTATCAGTGCACGAAGGGAGCGACACCAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCCGTCGAAGCTGTGCCTGTAGACCAAATCGACGCCGGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCTACAGACTTGGAGAAAGCCGAAGCCCAAATCGGAGTCGACGTGCACAGTGCCCTGAATGCTGCCCTTACAGGATAG Coding sequence (CDS)
ATGGTAATAATTCCAGCTACAACTGGGCAAATGGGTGTTCTTCCTGGTCATGTAGCTACAATCGCAGAGTTGAAGCCAGGAGTTCTATCAGTGCACGAAGGGAGCGACACCAAAAAGTACTTCGTGAGCAGTGGTTTTGCATTCATCCATGGCAACTCATACGCTGACATAATCGCCGTCGAAGCTGTGCCTGTAGACCAAATCGACGCCGGCCAAGTACAGAAGGGTCTTGCCGAATTCACCCAGAAGTTGAACTCTGCCTCTACAGACTTGGAGAAAGCCGAAGCCCAAATCGGAGTCGACGTGCACAGTGCCCTGAATGCTGCCCTTACAGGATAG Protein sequence
MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAVEAVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG
Homology
BLAST of Lag0020927 vs. NCBI nr
Match:
KAG7028721.1 (hypothetical protein SDJN02_09902, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 211.5 bits (537), Expect = 3.8e-51
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
Query: 1 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 60 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV Sbjct: 123 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 182 Query: 61 EAVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 113 EAVPVDQID QVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG Sbjct: 183 EAVPVDQIDPDQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 234
BLAST of Lag0020927 vs. NCBI nr
Match:
XP_023540281.1 (ATP synthase subunit delta', mitochondrial-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 211.5 bits (537), Expect = 3.8e-51
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
Query: 1 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 60 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV Sbjct: 89 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 148 Query: 61 EAVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 113 EAVPVDQID QVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG Sbjct: 149 EAVPVDQIDPDQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 200
BLAST of Lag0020927 vs. NCBI nr
Match:
XP_022974765.1 (ATP synthase subunit delta', mitochondrial-like [Cucurbita maxima])
HSP 1 Score: 211.5 bits (537), Expect = 3.8e-51
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
Query: 1 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 60 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV Sbjct: 89 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 148 Query: 61 EAVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 113 EAVPVDQID QVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG Sbjct: 149 EAVPVDQIDPDQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 200
BLAST of Lag0020927 vs. NCBI nr
Match:
XP_022936123.1 (ATP synthase subunit delta', mitochondrial-like [Cucurbita moschata])
HSP 1 Score: 211.5 bits (537), Expect = 3.8e-51
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
Query: 1 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 60 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV Sbjct: 89 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 148 Query: 61 EAVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 113 EAVPVDQID QVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG Sbjct: 149 EAVPVDQIDPDQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 200
BLAST of Lag0020927 vs. NCBI nr
Match:
KAG6597252.1 (hypothetical protein SDJN03_10432, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 211.5 bits (537), Expect = 3.8e-51
Identity = 110/112 (98.21%), Postives = 110/112 (98.21%), Query Frame = 0
Query: 1 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 60 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV Sbjct: 89 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 148 Query: 61 EAVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 113 EAVPVDQID QVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG Sbjct: 149 EAVPVDQIDPDQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 200
BLAST of Lag0020927 vs. ExPASy Swiss-Prot
Match:
Q40089 (ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=1)
HSP 1 Score: 194.9 bits (494), Expect = 4.9e-49
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0
Query: 1 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 60 MVIIPATTGQMGVLPGHVATIAELKPGV+SVHEG+D KYFVS GFAFIH NS+ADIIAV Sbjct: 89 MVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVSKYFVSGGFAFIHANSFADIIAV 148 Query: 61 EAVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 113 EAVP+D+IDA VQKGLAEFTQKLN+ASTD+EKAEAQIGVDVHSALNAALTG Sbjct: 149 EAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQIGVDVHSALNAALTG 200
BLAST of Lag0020927 vs. ExPASy Swiss-Prot
Match:
Q96252 (ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g47030 PE=1 SV=1)
HSP 1 Score: 183.3 bits (464), Expect = 1.5e-45
Identity = 92/112 (82.14%), Postives = 103/112 (91.96%), Query Frame = 0
Query: 1 MVIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAV 60 MVIIPA+TGQMGVLPGHV TIAELKPG++SVHEG+D KKYF+SSGFAF+H NS ADIIAV Sbjct: 92 MVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDVKKYFLSSGFAFLHANSVADIIAV 151 Query: 61 EAVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 113 EAVP+D ID QVQKGLAEF QKL SA+TDLEKAEAQIGV+VHSA+NAAL+G Sbjct: 152 EAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQIGVEVHSAINAALSG 203
BLAST of Lag0020927 vs. ExPASy Swiss-Prot
Match:
Q41000 (ATP synthase subunit delta', mitochondrial OS=Pisum sativum OX=3888 PE=3 SV=1)
HSP 1 Score: 178.3 bits (451), Expect = 4.7e-44
Identity = 92/111 (82.88%), Postives = 100/111 (90.09%), Query Frame = 0
Query: 2 VIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAVE 61 VIIPATTG+MGVLPGHVATIAELKPGVL+V EG+DT KYFVSSGF FIH NS ADIIAVE Sbjct: 87 VIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTKYFVSSGFRFIHANSVADIIAVE 146 Query: 62 AVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAALTG 113 AVPV+Q+D VQKGL EFTQKLNSA+TDLEK EAQIG+DV SALN+ALTG Sbjct: 147 AVPVNQLDRDLVQKGLQEFTQKLNSATTDLEKREAQIGIDVDSALNSALTG 197
BLAST of Lag0020927 vs. ExPASy Swiss-Prot
Match:
Q55F42 (ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum OX=44689 GN=atp5f1d PE=3 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 47/107 (43.93%), Postives = 69/107 (64.49%), Query Frame = 0
Query: 1 MVIIPATTGQMGVLPGHVATIAELKPGVLSV-HEGSDTKKYFVSSGFAFIHGNSYADIIA 60 +V +P G GV HV IAELKPGV+ + HE D +K+F+S GFAF++ ++ I Sbjct: 56 LVTLPGAKGIFGVAKNHVPRIAELKPGVIQINHENGDLEKFFISGGFAFVNPDASCYINT 115 Query: 61 VEAVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSAL 107 +EAVP+DQ+DA +V+ GLA +TQ N A + KA A IG++ + + Sbjct: 116 IEAVPIDQLDAEEVKNGLARYTQLYNDAQEENAKAVALIGLETYQQM 162
BLAST of Lag0020927 vs. ExPASy Swiss-Prot
Match:
Q757N0 (ATP synthase subunit delta, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) OX=284811 GN=ATP16 PE=3 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 1.6e-15
Identity = 50/109 (45.87%), Postives = 67/109 (61.47%), Query Frame = 0
Query: 2 VIIPATTGQMGVLPGHVATIAELKPGVLSVHEGSDTKKYFVSSGFAFIHGNSYADIIAVE 61 V +P TGQ+G+L HV + +L PGV+ V EGS++KK+FVS GFA + +S I +VE Sbjct: 50 VNLPVKTGQIGILANHVPIVEQLVPGVVEVLEGSESKKFFVSGGFATVQPDSTLSITSVE 109 Query: 62 AVPVDQIDAGQVQKGLAEFTQKLNSASTDLEKAEAQIGVDVHSALNAAL 111 A P+D A V+ LAE QK A+ AEA I ++V AL AAL Sbjct: 110 AFPLDSFSAENVRALLAE-AQKNAGAADSRVAAEASIQIEVLEALQAAL 157
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KAG7028721.1 3.8e-51 98.21 hypothetical protein SDJN02_09902, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023540281.1 3.8e-51 98.21 ATP synthase subunit delta', mitochondrial-like [Cucurbita pepo subsp. pepo] [more]
XP_022974765.1 3.8e-51 98.21 ATP synthase subunit delta', mitochondrial-like [Cucurbita maxima] [more]
XP_022936123.1 3.8e-51 98.21 ATP synthase subunit delta', mitochondrial-like [Cucurbita moschata] [more]
KAG6597252.1 3.8e-51 98.21 hypothetical protein SDJN03_10432, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
Q40089 4.9e-49 88.39 ATP synthase subunit delta', mitochondrial OS=Ipomoea batatas OX=4120 PE=1 SV=1 [more]
Q96252 1.5e-45 82.14 ATP synthase subunit delta', mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At... [more]
Q41000 4.7e-44 82.88 ATP synthase subunit delta', mitochondrial OS=Pisum sativum OX=3888 PE=3 SV=1 [more]
Q55F42 1.5e-18 43.93 ATP synthase subunit delta, mitochondrial OS=Dictyostelium discoideum OX=44689 G... [more]
Q757N0 1.6e-15 45.87 ATP synthase subunit delta, mitochondrial OS=Ashbya gossypii (strain ATCC 10895 ... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G G T A A T A A T T C C A G C T A C A A C T G G G C A A A T G G G T G T T C T T C C T G G T C A T G T A G C T A C A A T C G C A G A G T T G A A G C C A G G A G T T C T A T C A G T G C A C G A A G G G A G C G A C A C C A A A A A G T A C T T C G T G A G C A G T G G T T T T G C A T T C A T C C A T G G C A A C T C A T A C G C T G A C A T A A T C G C C G T C G A A G C T G T G C C T G T A G A C C A A A T C G A C G C C G G C C A A G T A C A G A A G G G T C T T G C C G A A T T C A C C C A G A A G T T G A A C T C T G C C T C T A C A G A C T T G G A G A A A G C C G A A G C C C A A A T C G G A G T C G A C G T G C A C A G T G C C C T G A A T G C T G C C C T T A C A G G A T A G 50 100 150 200 250 300 Score = Expect = 8.2E-9 / Score = 37.2 Score = Expect = 1.4E-13 / Score = 50.5 Expect = 1.4E-21 / Score = 78.3 Score = Score = Expect = 2.90483E-31 / Score = 105.286 Sequence Coil G3DSA:1.20.5.440 PTHR13822:SF17 PF02823 G3DSA:2.60.15.10 SSF51344 PTHR13822 cd12152
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available COILS Coil Coil coord: 77..97
None No IPR available GENE3D 1.20.5.440 coord: 69..111 e-value: 8.2E-9 score: 37.2
None No IPR available PANTHER PTHR13822:SF17 SUBFAMILY NOT NAMED coord: 1..112
IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal PFAM PF02823 ATP-synt_DE_N coord: 1..53 e-value: 1.4E-13 score: 50.5
IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal GENE3D 2.60.15.10 coord: 1..68 e-value: 1.4E-21 score: 78.3
IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal SUPERFAMILY 51344 Epsilon subunit of F1F0-ATP synthase N-terminal domain coord: 1..63
IPR001469 ATP synthase, F1 complex, delta/epsilon subunit PANTHER PTHR13822 ATP SYNTHASE DELTA/EPSILON CHAIN coord: 1..112
IPR001469 ATP synthase, F1 complex, delta/epsilon subunit CDD cd12152 F1-ATPase_delta coord: 1..105 e-value: 2.90483E-31 score: 105.286
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
biological_process
GO:0015986
ATP synthesis coupled proton transport
cellular_component
GO:0000275
mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)
cellular_component
GO:0045261
proton-transporting ATP synthase complex, catalytic core F(1)
molecular_function
GO:0046933
proton-transporting ATP synthase activity, rotational mechanism