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Lag0020913 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTAAGCTCATCAATTCCCTCCTCGCCGTCGCCGTCATCAACTTCAGCTCTTCGACCCTCCGCCACTTTATGTTCAGGTTTCATTCAGAAACCCACTTCTCTTTCATGGCCATCTTCTTTTTCCAATCTCTCCATCTCCTTCGACGCCATCAAAGCGCCTTCTCTTTCAACGCACAATAGAGTACGTCTTCTCTCTTCTTTTACTCGAGTTCCACAAATTTCTCTGTCTTCCTGCAAAAGAAAAAAAGAATCTATTCCATGAAATATAAAATCTCGAATTCGAAGAATTATTGATGGAAATTCTTCGAAACCCACGCGAATGCTGAGGAAAAATCTGTAGTTGTTTGTGTTTGTTTTGATGAGAGAATGAAGTTGGTTCAATACAATGGCATCCGAATCCGTTGTCAGTTTTGAGGGATGCCCTTTCGGATTTTGCAGCCATGGTGTTCGACGAAATGTATAGTCGAAACTGGTTTCTTCATCGTTTTGAAACGAGAAGGATTGAGTCGAGCAAATGGCTAACCTGAGTTCTCATCAGTACACAATGGAACATCGGCACCAATACAAACTCAACAAGCTTTTCAATCTTATAGATATATAATTACCTACAAATCTTCTCTCTAGTTTTACTTCTCAAGAAAGAAAAGGGGTTTTCAGTGTAGGAAAAGGATCCCTATAAAGTAGAATTGTGGCAAGTGAAACCCAAATTTTCTAGCAAAATGAACGGATAGAATAGAGTGAAATAATAGAAACCAGCAGCTTTTTTAGCATTAATCACTTGAGTCCTATTTGAGTTTAGATCAGACTAAAAGATGATAATGGCACATAATCTTTAAATTAAGGTTTAAATACCAATCCTTGAAAGTTGACTTGCATTACTTGAGCTCAAAATTTTAATCAAAGAAGAATCAGATTATCAATTTTATGACTTGTATTTATTTGTAGAAATCTTGCATTCAAGCAGCCTGGACACGAAGATCTCGAGGAGAAGCTGCAAAAAGACCGAACAGGAAATCATGGAAGCAAAGAACAGATATGTACATGAGACCATTTGTTTTGGATGTTTTCTTTTCAAGAAGATTCATCCATGCCAAAGTGATGCATCGAGGAACAAGCAAGGTGGTATCGGCAGCAAGCACCAATTCCAAGGATTTAAGGTATTCATTGCCATCACCTACCGATGACAATGCATGTAGGATTATTGGGAACCTAATAGCTGAGAGATGTAAAGAAGCTGATGTATTTGTAATGTCTTATGAGCCTCCAAATACTGAAAAAATTGAAGGGAAAATTGGGATTGTCATTGATACCATCAAGGAGAATGGTATCCTATTCGTCTAG ATGTTAAGCTCATCAATTCCCTCCTCGCCGTCGCCGTCATCAACTTCAGCTCTTCGACCCTCCGCCACTTTATGTTCAGGTTTCATTCAGAAACCCACTTCTCTTTCATGGCCATCTTCTTTTTCCAATCTCTCCATCTCCTTCGACGCCATCAAAGCGCCTTCTCTTTCAACGCACAATAGAAAATCTTGCATTCAAGCAGCCTGGACACGAAGATCTCGAGGAGAAGCTGCAAAAAGACCGAACAGGAAATCATGGAAGCAAAGAACAGATATGTACATGAGACCATTTGTTTTGGATGTTTTCTTTTCAAGAAGATTCATCCATGCCAAAGTGATGCATCGAGGAACAAGCAAGGTGGTATCGGCAGCAAGCACCAATTCCAAGGATTTAAGGTATTCATTGCCATCACCTACCGATGACAATGCATGTAGGATTATTGGGAACCTAATAGCTGAGAGATGTAAAGAAGCTGATGTATTTGTAATGTCTTATGAGCCTCCAAATACTGAAAAAATTGAAGGGAAAATTGGGATTGTCATTGATACCATCAAGGAGAATGGTATCCTATTCGTCTAG ATGTTAAGCTCATCAATTCCCTCCTCGCCGTCGCCGTCATCAACTTCAGCTCTTCGACCCTCCGCCACTTTATGTTCAGGTTTCATTCAGAAACCCACTTCTCTTTCATGGCCATCTTCTTTTTCCAATCTCTCCATCTCCTTCGACGCCATCAAAGCGCCTTCTCTTTCAACGCACAATAGAAAATCTTGCATTCAAGCAGCCTGGACACGAAGATCTCGAGGAGAAGCTGCAAAAAGACCGAACAGGAAATCATGGAAGCAAAGAACAGATATGTACATGAGACCATTTGTTTTGGATGTTTTCTTTTCAAGAAGATTCATCCATGCCAAAGTGATGCATCGAGGAACAAGCAAGGTGGTATCGGCAGCAAGCACCAATTCCAAGGATTTAAGGTATTCATTGCCATCACCTACCGATGACAATGCATGTAGGATTATTGGGAACCTAATAGCTGAGAGATGTAAAGAAGCTGATGTATTTGTAATGTCTTATGAGCCTCCAAATACTGAAAAAATTGAAGGGAAAATTGGGATTGTCATTGATACCATCAAGGAGAATGGTATCCTATTCGTCTAG MLSSSIPSSPSPSSTSALRPSATLCSGFIQKPTSLSWPSSFSNLSISFDAIKAPSLSTHNRKSCIQAAWTRRSRGEAAKRPNRKSWKQRTDMYMRPFVLDVFFSRRFIHAKVMHRGTSKVVSAASTNSKDLRYSLPSPTDDNACRIIGNLIAERCKEADVFVMSYEPPNTEKIEGKIGIVIDTIKENGILFV Homology
BLAST of Lag0020913 vs. NCBI nr
Match: XP_038905466.1 (50S ribosomal protein L18-like [Benincasa hispida]) HSP 1 Score: 317.0 bits (811), Expect = 1.1e-82 Identity = 167/192 (86.98%), Postives = 178/192 (92.71%), Query Frame = 0
BLAST of Lag0020913 vs. NCBI nr
Match: XP_022147050.1 (uncharacterized protein LOC111016081 [Momordica charantia]) HSP 1 Score: 315.8 bits (808), Expect = 2.5e-82 Identity = 166/192 (86.46%), Postives = 173/192 (90.10%), Query Frame = 0
BLAST of Lag0020913 vs. NCBI nr
Match: XP_023540956.1 (uncharacterized protein LOC111801186 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 298.1 bits (762), Expect = 5.4e-77 Identity = 163/192 (84.90%), Postives = 169/192 (88.02%), Query Frame = 0
BLAST of Lag0020913 vs. NCBI nr
Match: XP_022974979.1 (uncharacterized protein LOC111473828 [Cucurbita maxima]) HSP 1 Score: 297.0 bits (759), Expect = 1.2e-76 Identity = 162/191 (84.82%), Postives = 168/191 (87.96%), Query Frame = 0
BLAST of Lag0020913 vs. NCBI nr
Match: XP_008438261.1 (PREDICTED: 50S ribosomal protein L18-like [Cucumis melo]) HSP 1 Score: 295.0 bits (754), Expect = 4.5e-76 Identity = 156/193 (80.83%), Postives = 169/193 (87.56%), Query Frame = 0
BLAST of Lag0020913 vs. ExPASy Swiss-Prot
Match: Q5P316 (50S ribosomal protein L18 OS=Aromatoleum aromaticum (strain EbN1) OX=76114 GN=rplR PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 5.1e-06 Identity = 37/121 (30.58%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of Lag0020913 vs. ExPASy Swiss-Prot
Match: A9BG02 (50S ribosomal protein L18 OS=Petrotoga mobilis (strain DSM 10674 / SJ95) OX=403833 GN=rplR PE=3 SV=1) HSP 1 Score: 52.4 bits (124), Expect = 6.7e-06 Identity = 33/121 (27.27%), Postives = 65/121 (53.72%), Query Frame = 0
BLAST of Lag0020913 vs. ExPASy Swiss-Prot
Match: B5ZYV1 (50S ribosomal protein L18 OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) OX=395492 GN=rplR PE=3 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.1e-05 Identity = 42/120 (35.00%), Postives = 63/120 (52.50%), Query Frame = 0
BLAST of Lag0020913 vs. ExPASy Swiss-Prot
Match: A5FZU9 (50S ribosomal protein L18 OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=rplR PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 4.3e-05 Identity = 34/114 (29.82%), Postives = 60/114 (52.63%), Query Frame = 0
BLAST of Lag0020913 vs. ExPASy Swiss-Prot
Match: Q14JA4 (50S ribosomal protein L18 OS=Francisella tularensis subsp. tularensis (strain FSC 198) OX=393115 GN=rplR PE=3 SV=1) HSP 1 Score: 49.3 bits (116), Expect = 5.7e-05 Identity = 32/116 (27.59%), Postives = 64/116 (55.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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