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Lag0020884 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGCTGTCAGGGAGAAACTCCACGACATCAGCGTCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGTAAGCTCTCGAAACACACAAATTCCTTTTCATGTTTGTATCTTGATTCCACCCTCGAAAATATTGAATTTGGCTACGTTATTGAAATCATTTACAAAAGTTATAATTTCGGTTATTATGGAAATGAAAGTCTTATAAAATCAACTTTTGAACATTCTTAATCGTCACCATGAAAAGGAATCTTAGATCGTTTCTCTTCATCTGGTCCCACGTCTAACACTCCATCCAGTGGAATCGAACCACAATAGATGACTAGTCTTGTGACTTCTTACTTTCACTCTTCGACTCGAACCTAAAAAAAGATTTATTCACCATTCCATCCGAGATATAAATGTGAATCGTAAACGTTTCGAAATTTGAATTTGAAATGGACATTGGCAGGCAGAGAAGGAGCTAGCAAAGGCAAGAGTGGAGGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTGGCCAAAGCTGGAATGAAGGCTGAGAAAGAAATGGCTAAGTTTGCCGAATCTCACACCACTGACTTTGTGGCTCCCGGCGGCACCATCGGTATGGCCGCAGCTCCCGACGTGACTATAATCGGAGTCCCGGGCACTGTCGACATGGCTGGACCTCCTCACTCTAAGAAGTTACTGTAA ATGCAAGCTGTCAGGGAGAAACTCCACGACATCAGCGTCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAGGCAAGAGTGGAGGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTGGCCAAAGCTGGAATGAAGGCTGAGAAAGAAATGGCTAAGTTTGCCGAATCTCACACCACTGACTTTGTGGCTCCCGGCGGCACCATCGGTATGGCCGCAGCTCCCGACGTGACTATAATCGGAGTCCCGGGCACTGTCGACATGGCTGGACCTCCTCACTCTAAGAAGTTACTGTAA ATGCAAGCTGTCAGGGAGAAACTCCACGACATCAGCGTCATGCGCAAGGCCAAGGCCGAGGCAAAGGCCGAAGAGAAGGCAGAGAAGGAGCTAGCAAAGGCAAGAGTGGAGGTGGCTCATGAGGTAAGATTGGCAAGAGAGGCTGAAGCTGCAATGGATCTTCATGTGGCCAAAGCTGGAATGAAGGCTGAGAAAGAAATGGCTAAGTTTGCCGAATCTCACACCACTGACTTTGTGGCTCCCGGCGGCACCATCGGTATGGCCGCAGCTCCCGACGTGACTATAATCGGAGTCCCGGGCACTGTCGACATGGCTGGACCTCCTCACTCTAAGAAGTTACTGTAA MQAVREKLHDISVMRKAKAEAKAEEKAEKELAKARVEVAHEVRLAREAEAAMDLHVAKAGMKAEKEMAKFAESHTTDFVAPGGTIGMAAAPDVTIIGVPGTVDMAGPPHSKKLL Homology
BLAST of Lag0020884 vs. NCBI nr
Match: XP_008438228.1 (PREDICTED: uncharacterized protein LOC103483397 [Cucumis melo] >KAA0049075.1 late embryogenesis abundant protein [Cucumis melo var. makuwa] >TYK17488.1 late embryogenesis abundant protein [Cucumis melo var. makuwa]) HSP 1 Score: 162.2 bits (409), Expect = 2.7e-36 Identity = 94/123 (76.42%), Postives = 105/123 (85.37%), Query Frame = 0
BLAST of Lag0020884 vs. NCBI nr
Match: XP_038878054.1 (late embryogenesis abundant protein 6-like [Benincasa hispida]) HSP 1 Score: 162.2 bits (409), Expect = 2.7e-36 Identity = 96/121 (79.34%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of Lag0020884 vs. NCBI nr
Match: XP_004134355.1 (late embryogenesis abundant protein 6 [Cucumis sativus] >KGN56644.1 hypothetical protein Csa_011484 [Cucumis sativus]) HSP 1 Score: 161.4 bits (407), Expect = 4.6e-36 Identity = 94/121 (77.69%), Postives = 104/121 (85.95%), Query Frame = 0
BLAST of Lag0020884 vs. NCBI nr
Match: XP_022147095.1 (late embryogenesis abundant protein 6-like [Momordica charantia]) HSP 1 Score: 159.5 bits (402), Expect = 1.8e-35 Identity = 91/115 (79.13%), Postives = 101/115 (87.83%), Query Frame = 0
BLAST of Lag0020884 vs. NCBI nr
Match: XP_022924652.1 (late embryogenesis abundant protein 6-like [Cucurbita moschata] >XP_022924653.1 late embryogenesis abundant protein 6-like [Cucurbita moschata] >KAG6582534.1 Late embryogenesis abundant protein 6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 150.2 bits (378), Expect = 1.1e-32 Identity = 89/117 (76.07%), Postives = 97/117 (82.91%), Query Frame = 0
BLAST of Lag0020884 vs. ExPASy Swiss-Prot
Match: Q39138 (Late embryogenesis abundant protein 6 OS=Arabidopsis thaliana OX=3702 GN=LEA6 PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.8e-06 Identity = 37/82 (45.12%), Postives = 54/82 (65.85%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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