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Lag0020866 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAGGCGGAAAGGAAAATGATAGTAATGACAAAGGCCTGTTTTCACATATGGCGGCGTTTGCTGCAGGGCACCACTATCCTCATCCTCATGGATATCCACCACCACCGCCATACGCCGGAGCCGGATATCCCCCTCCGGGAGGGTACCCCCCAGCTGGGTATCCCCCTCCCGGCGGATATCCTCCGGCTGGCTATCCTCCTCACGGTGGACACCCACATACAGCCTATCCTTATCATGGCGGATACCCTCCCGCTGGCTATCCTGGCCCCCATCATTACCATGGTATTATATCATTCTATATTTCTATTGTCCTCGAAAGTGTGTTCCGTTTAATTTTGAAAAAAAAATTAATGTTATCAAATATATGAGTGTTTAAATTCTGAATAATTTTTATACAAAATGTTTTTTAAAAAATGTATTAGTGAAAAACATTTAAATTAAAATGTATTTCAAACGGACCCTTAATGACTTTGGTACATAATAATATCTTGTTATTGATTCAATATGGGTTTCAATGCTACCCTTGGGCGCTAATGGTTAAGTTTTTGGGTAAAGAAGGAAAAAGGGACAGCCCCTCTTAGATTCTTTAATTTTTTAGAATTTAAAAATTATGTATTTAAAAAACTAGAATGTAAAATTTTACTTCATGTGAAATTGCTATACATTCAAACTCATTATCTTTTGAACCTTTTAAGTTAGAGTTCTTATTATCTTTCGAAACGGGCTCATACTCTTCTTTGTTGAATGTGGGATGGGAGATCAAAACCTCGAACCTCGTAAACGAGGGTACATACTGATTATCTCTGAGTTATGTTCACTTTGGCAAATGAACCCGTGTTATAAGCACAACACAAGACTTTCAAGAATTATTTCAAGAATCAATTAAAAAAAAAAGGTTTTGTTGCTAACTAGTTTATTAGATATCACACTCGTTTGTTTATTGGATCCTAACGGGCCTTGCCATGTAGAAAGAGCTAGGAAGCTGGCTGGTTGTTTGTTGTGACAAATTCCAACATTGGATCATCGTCATGAATTTTCGTTACAGGCCATGGACACGGACACCACGGCATGGGGCCAATGTTGGCTGGTGGAGCCGCTGCTGCAGCCGCTGCTTACGGTGCTCATCATCTAGCTCATCATGGACGCCCATATGGCTTCTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGGCAAGTTCAAGAAATGGAAGTGA ATGGGAGGCGGAAAGGAAAATGATAGTAATGACAAAGGCCTGTTTTCACATATGGCGGCGTTTGCTGCAGGGCACCACTATCCTCATCCTCATGGATATCCACCACCACCGCCATACGCCGGAGCCGGATATCCCCCTCCGGGAGGGTACCCCCCAGCTGGGTATCCCCCTCCCGGCGGATATCCTCCGGCTGGCTATCCTCCTCACGGTGGACACCCACATACAGCCTATCCTTATCATGGCGGATACCCTCCCGCTGGCTATCCTGGCCCCCATCATTACCATGGCCATGGACACGGACACCACGGCATGGGGCCAATGTTGGCTGGTGGAGCCGCTGCTGCAGCCGCTGCTTACGGTGCTCATCATCTAGCTCATCATGGACGCCCATATGGCTTCTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGGCAAGTTCAAGAAATGGAAGTGA ATGGGAGGCGGAAAGGAAAATGATAGTAATGACAAAGGCCTGTTTTCACATATGGCGGCGTTTGCTGCAGGGCACCACTATCCTCATCCTCATGGATATCCACCACCACCGCCATACGCCGGAGCCGGATATCCCCCTCCGGGAGGGTACCCCCCAGCTGGGTATCCCCCTCCCGGCGGATATCCTCCGGCTGGCTATCCTCCTCACGGTGGACACCCACATACAGCCTATCCTTATCATGGCGGATACCCTCCCGCTGGCTATCCTGGCCCCCATCATTACCATGGCCATGGACACGGACACCACGGCATGGGGCCAATGTTGGCTGGTGGAGCCGCTGCTGCAGCCGCTGCTTACGGTGCTCATCATCTAGCTCATCATGGACGCCCATATGGCTTCTTTGGTCACGGAAAATTCAAACATGGGAAATTTGGCAAGCGTTGGAAGCATGGAGGCAAGTTCAAGAAATGGAAGTGA MGGGKENDSNDKGLFSHMAAFAAGHHYPHPHGYPPPPPYAGAGYPPPGGYPPAGYPPPGGYPPAGYPPHGGHPHTAYPYHGGYPPAGYPGPHHYHGHGHGHHGMGPMLAGGAAAAAAAYGAHHLAHHGRPYGFFGHGKFKHGKFGKRWKHGGKFKKWK Homology
BLAST of Lag0020866 vs. NCBI nr
Match: XP_022147022.1 (glycine-rich protein A3 [Momordica charantia]) HSP 1 Score: 246.1 bits (627), Expect = 2.0e-61 Identity = 133/163 (81.60%), Postives = 141/163 (86.50%), Query Frame = 0
BLAST of Lag0020866 vs. NCBI nr
Match: XP_008438206.1 (PREDICTED: glycine-rich protein A3 [Cucumis melo]) HSP 1 Score: 243.8 bits (621), Expect = 9.9e-61 Identity = 134/162 (82.72%), Postives = 141/162 (87.04%), Query Frame = 0
BLAST of Lag0020866 vs. NCBI nr
Match: XP_022924320.1 (glycine-rich protein A3-like [Cucurbita moschata] >XP_022924321.1 glycine-rich protein A3-like [Cucurbita moschata]) HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57 Identity = 132/170 (77.65%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of Lag0020866 vs. NCBI nr
Match: XP_022980434.1 (glycine-rich protein A3-like [Cucurbita maxima] >XP_022980435.1 glycine-rich protein A3-like [Cucurbita maxima]) HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57 Identity = 132/170 (77.65%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of Lag0020866 vs. NCBI nr
Match: KAG6582545.1 (hypothetical protein SDJN03_22547, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 233.0 bits (593), Expect = 1.7e-57 Identity = 132/170 (77.65%), Postives = 137/170 (80.59%), Query Frame = 0
BLAST of Lag0020866 vs. ExPASy Swiss-Prot
Match: P37705 (Glycine-rich protein A3 OS=Daucus carota OX=4039 PE=2 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 9.7e-19 Identity = 79/153 (51.63%), Postives = 89/153 (58.17%), Query Frame = 0
BLAST of Lag0020866 vs. ExPASy Swiss-Prot
Match: O16005 (Rhodopsin OS=Sepia officinalis OX=6610 GN=RHO PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 2.7e-05 Identity = 36/62 (58.06%), Postives = 36/62 (58.06%), Query Frame = 0
BLAST of Lag0020866 vs. ExPASy Swiss-Prot
Match: P24639 (Annexin A7 OS=Dictyostelium discoideum OX=44689 GN=nxnA PE=1 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 4.0e-04 Identity = 37/66 (56.06%), Postives = 38/66 (57.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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