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Lag0020848 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTGGGCTTCTGTTGTTACCAACTGCGGCATCAAAATTCTGCGCTACCGTCCCCTTTTGCTTCCACGTGTCCTCATCGCTCCAATTCCCCTCCCCATCGCTCCTCCTGTATCTTCCATGGATAGAAGCAATGCCTCCTCCTTTTCTTCTTATGCCTATTCCAGTAAAAGGTTGATTATTCATTCTCCTTCATCATCCTTCAATCGATGGAAAACTTCCTAGTTTTTCTGCCTCGTTTTTCATATTTTAGATTCTCGAATTCGTTGCTTTGCTTGTGTTTTTTATTACGATTTTTGGATGTGTTTGTTGAAATTGTAGACGTGGTTATTGATTCTGTTCTTTGTACTGATTTTTTTTCCGATTAGTGGTGGAAGAGGAAGAGGTTTGGACATGAGGAATGACAGAGAAAGAACGAGAGGGCGCGGTGGCGGAGGCGGTGGCTCTGGTAAAGACAAAATCGACGCCCTTGGTAGACTCTTGTAAGCATATTTCGTCTGTTGGTTTCTTGTTAAGGCGTTAATTTAATCATCTCAGATTAGTTGTTAAACTTATTGCTTATTAATCCTGTGGAAGTTTCTGTAGTTGCTTTCTTAGTGAGAGTAGTGTTATTTTATCTTATGGTTAAACTATGATTCATGAAGCTGAAGCTCGATTGACTAGAATTTTGATATTTTCTGATTTTTCTCTTCTACACTTGCTGGCTTGGCTATAATTTTTTTCTTGGCCGAGGACAAAGGAAAGTGGAATAGGAGGATTATACTCCTACCTTAAATCATATGTACTTGATCGGTTAACTGCTGGCTATATTGATTTCAGCATTGCATTTCTGCTCGAGAAATTTTCAGAGGGAATAGAATGTAATCTGATGATCCATATGTTATATTTCCTTTTAGTAGTTGAAACTTGAATGAACATTTGGGAATGCTTGAGATTAAGCACTTGGGAACTTTCGAGTTTTGCGTTAAAATCTTAATAACTTAAACCTTTTGAGGTGGTTTGCTGACAAGTTCAAGATGAGTTGTTGCATTTGTTCCTATTCTTTACTGTTATCACTATATTGGCTGGTGAAGAATGATTAAACGCAAGGAGGAGTGTGAGAGGAAGGCTAGGTTATGCACATAAGATTTGTTTTTACAGCAATGTATATTTCACTGTTTATCCATCAATTGATATTTGCTCCTTTTAATGAACTTCAGGACACGCATCTTGCGGCATATGGCTTCTGAGTTAAACTTGAATATGAGAAGTGATGGATATGTCAAAGTTCAGGATTTGCTAAAGTTGAATTTGAAAACATTTGCTAATGTCCCACTCAGATCGCACACAATTGATGACATAAGGGAGGTTGGTTGAATAATTTTCTTGCTTACATGCTTTAGTATCACTTTCATTTGTAGAATCATTCTGGGACGTAACTTGGGTTTTCCATTGCTCAACATTGATTCATCTATTAATCTTGATCCCCCGCCTCTAGAGGATTATTTATTTGCTAAGCTCAATTAAAACTTTCCCCAAATAAAGGGCTTAGAAGGAATGAATTCAAGCCATGGTGTTGATTTACCTAGGATTTAAGAGTTTTCTTGGGATCCAAATGTAGTAGGGTCAGACGGTTGTCCGTGAGAATAGTCGAGGTGCATGCAAGTTGGTCTAAAAAGAAAATTTTAAACTTTCACCCCGCATCTACTCTGTGCTGTACCTTTGATCCTTTTATCCTTGCTTTCTTTCTCAGTTAGTTTCACTAATGTATTTCCTCTTCCCTGACAACTTGTAAATTTGCAGTTCAGTTTTGTTTCTGTAAGCATCTAGCATTGATGAATAGTTTTTTCTTTTTAATGGCAGGCTGTCAGGAAGGATAATAAGCAGCGTTTCAGCCTCCTGGAAGAGGATGGAGAGCTCTTAATTCGAGCAAACCAAGGCCATACAGTCACGGTTATTTTCTTTCTTTATAAACCATTGAATACATTACTGTTAGCCTTTTAGAAAATGTTGGGGGACTGTCAATCAATCTGATTGATTGGAAAATTGTTGATTGCTTCACGTTAGCTTATATGCATTTGATGGTTTTTGACATTAACTTATATGTGGATTATAAAATTCATTTCTCCTTGTTTTCTATTGTTTCTCTGTTTTGTGACAATCCATCAGCCTTGTAAGATTGGTATATTGTTCGCTATACAGGATTGTTTACATGAGGCTTTTCCACTCCTTTTTATAACCTCTTCTAGATAAAACCATCTCTCTTAAGATTGTGATAATGGAACTAGATTGTCTACACCATCTTAAATGGAAAACACATTACTTGCAGGTGGTTGAAACTGAAAGCTTACTAAAACCTATTCTTTCGGGTGAGGAGGTTCCAGGTACTATGATTTGATGCCCTTAAACTTTTCTACTTTTCCCATACATCATCCTTTCCCCCTTGATGTGCACGATGTGAATATCGATGCATTTTAAAATTTAAACTTCTATTTTTGATATTTAATTAATCACTTTCCTTTTCTCCCTCTCTCCATGGCAGTATGTGTACATGGTACTTATAAGAAGAATTTGGAATCAATTCTGGAATCTGGTTTGAAACGCATGAAAAGATTGCATGTTCACTTCTCATGTGGTTTGCCAACAGATGGGGAGGTTATCAGTGGTAAGTTAAGAGAATCTTATTGTTACATTTCCCTGAAGAATTTATCCGATAAAACCATGATGTCACTTTGTTTGGCAATCAGTTGCTTCTGCAATTGCACATCTTCACCTACTTATCTCTTTATATAAGTGGCAACTCAGGAAGAATCTTATGTTTTGCATATAATTTTCGGTAAAAGTAAATGAAATACCTTTATTCATGTATTGCTGTTGAGGTTAAATTTTTCAAGAGTAAAAGAAAATACCTTTATTCATGTATCCCCGACTTGATTTTCTCAACCATTTTTCATACATCCATGATTATACAAGATCAAGAAAAAGTACCCTGACATGAATATAAGGCCATCAGTTCGCTTTTCTTGCACTAGGAGGAAGAAGCGTGGAGCTGAGAAGGGCAAATAGAGTCTTGTGGGCCAAAGGAAAGTAGTTAATTGGAATATTATTGAGGTCAGCAAACCAATTTGAAGTTGGTTTGTTGGATGTTGAGAGCTGGCGGATTCTGAGATACATGTACTTAGAAGGGGAGAGGGAAAGAGTTGGGTAGTTGTAAGTTGAACTTGGAAATAGTTTAGCCTTTGGAGAGGGACAAATTTATATCCTTCTCCTATCGTCAGCAACAATTATATTCTTTCCCGAGGCTGTATCGGACGGACATGTTTAGAAGTGATTTTGGAATGCCTGAAATCATTTTTATCATGCCCTTTTTAGTGATTTTGGACCAGACAAAAGTGATTTTGGCCCTTGCAAAGTCACTCTCAAACACACCCTTAGTCTTATAGTTAACCTAAATTGGAGAGACCAAGCTAATTTTATTATTTTGTTTTAATCTGACAGGTATGAGACGTGATGTTAATGTTTTAATCTTTCTTGATGTCAAGAAAGCTCTGGATGGTATTGTTGAACCCTCTCTCTCTCTCTCCTTATGGACATTTTATGTTATAAAGGTGAAACGTGATGATAACCGATGTTTTTGCTAAAACATTCTATTTCAGATGGAATGAAGCTTTACATTTCGGACAACAAGGTCATTCTGACTGAAGGTTTCGATGGCGTCGTGGCAGTAAAATACTTCCAAAAAATTGAGTCATGGCCGAATCGACAACCTATTCCTTTTTGA ATGTGGGCTTCTGTTGTTACCAACTGCGGCATCAAAATTCTGCGCTACCGTCCCCTTTTGCTTCCACGTGTCCTCATCGCTCCAATTCCCCTCCCCATCGCTCCTCCTGTATCTTCCATGGATAGAAGCAATGCCTCCTCCTTTTCTTCTTATGCCTATTCCAGTAAAAGTGGTGGAAGAGGAAGAGGTTTGGACATGAGGAATGACAGAGAAAGAACGAGAGGGCGCGGTGGCGGAGGCGGTGGCTCTGGTAAAGACAAAATCGACGCCCTTGGTAGACTCTTGACACGCATCTTGCGGCATATGGCTTCTGAGTTAAACTTGAATATGAGAAGTGATGGATATGTCAAAGTTCAGGATTTGCTAAAGTTGAATTTGAAAACATTTGCTAATGTCCCACTCAGATCGCACACAATTGATGACATAAGGGAGGCTGTCAGGAAGGATAATAAGCAGCGTTTCAGCCTCCTGGAAGAGGATGGAGAGCTCTTAATTCGAGCAAACCAAGGCCATACAGTCACGGTGGTTGAAACTGAAAGCTTACTAAAACCTATTCTTTCGGGTGAGGAGGTTCCAGTATGTGTACATGGTACTTATAAGAAGAATTTGGAATCAATTCTGGAATCTGGTTTGAAACGCATGAAAAGATTGCATGTTCACTTCTCATGTGGTTTGCCAACAGATGGGGAGGTTATCAGTGGTATGAGACGTGATGTTAATGTTTTAATCTTTCTTGATGTCAAGAAAGCTCTGGATGATGGAATGAAGCTTTACATTTCGGACAACAAGGTCATTCTGACTGAAGGTTTCGATGGCGTCGTGGCAGTAAAATACTTCCAAAAAATTGAGTCATGGCCGAATCGACAACCTATTCCTTTTTGA ATGTGGGCTTCTGTTGTTACCAACTGCGGCATCAAAATTCTGCGCTACCGTCCCCTTTTGCTTCCACGTGTCCTCATCGCTCCAATTCCCCTCCCCATCGCTCCTCCTGTATCTTCCATGGATAGAAGCAATGCCTCCTCCTTTTCTTCTTATGCCTATTCCAGTAAAAGTGGTGGAAGAGGAAGAGGTTTGGACATGAGGAATGACAGAGAAAGAACGAGAGGGCGCGGTGGCGGAGGCGGTGGCTCTGGTAAAGACAAAATCGACGCCCTTGGTAGACTCTTGACACGCATCTTGCGGCATATGGCTTCTGAGTTAAACTTGAATATGAGAAGTGATGGATATGTCAAAGTTCAGGATTTGCTAAAGTTGAATTTGAAAACATTTGCTAATGTCCCACTCAGATCGCACACAATTGATGACATAAGGGAGGCTGTCAGGAAGGATAATAAGCAGCGTTTCAGCCTCCTGGAAGAGGATGGAGAGCTCTTAATTCGAGCAAACCAAGGCCATACAGTCACGGTGGTTGAAACTGAAAGCTTACTAAAACCTATTCTTTCGGGTGAGGAGGTTCCAGTATGTGTACATGGTACTTATAAGAAGAATTTGGAATCAATTCTGGAATCTGGTTTGAAACGCATGAAAAGATTGCATGTTCACTTCTCATGTGGTTTGCCAACAGATGGGGAGGTTATCAGTGGTATGAGACGTGATGTTAATGTTTTAATCTTTCTTGATGTCAAGAAAGCTCTGGATGATGGAATGAAGCTTTACATTTCGGACAACAAGGTCATTCTGACTGAAGGTTTCGATGGCGTCGTGGCAGTAAAATACTTCCAAAAAATTGAGTCATGGCCGAATCGACAACCTATTCCTTTTTGA MWASVVTNCGIKILRYRPLLLPRVLIAPIPLPIAPPVSSMDRSNASSFSSYAYSSKSGGRGRGLDMRNDRERTRGRGGGGGGSGKDKIDALGRLLTRILRHMASELNLNMRSDGYVKVQDLLKLNLKTFANVPLRSHTIDDIREAVRKDNKQRFSLLEEDGELLIRANQGHTVTVVETESLLKPILSGEEVPVCVHGTYKKNLESILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLDVKKALDDGMKLYISDNKVILTEGFDGVVAVKYFQKIESWPNRQPIPF Homology
BLAST of Lag0020848 vs. NCBI nr
Match: XP_038893116.1 (tRNA 2'-phosphotransferase 1 [Benincasa hispida]) HSP 1 Score: 537.0 bits (1382), Expect = 1.0e-148 Identity = 272/293 (92.83%), Postives = 283/293 (96.59%), Query Frame = 0
BLAST of Lag0020848 vs. NCBI nr
Match: XP_022147085.1 (tRNA 2'-phosphotransferase 1 [Momordica charantia] >XP_022147086.1 tRNA 2'-phosphotransferase 1 [Momordica charantia]) HSP 1 Score: 533.1 bits (1372), Expect = 1.5e-147 Identity = 272/293 (92.83%), Postives = 281/293 (95.90%), Query Frame = 0
BLAST of Lag0020848 vs. NCBI nr
Match: TYK17519.1 (tRNA 2'-phosphotransferase 1 [Cucumis melo var. makuwa]) HSP 1 Score: 528.9 bits (1361), Expect = 2.8e-146 Identity = 266/293 (90.78%), Postives = 282/293 (96.25%), Query Frame = 0
BLAST of Lag0020848 vs. NCBI nr
Match: XP_004133917.2 (tRNA 2'-phosphotransferase 1 isoform X1 [Cucumis sativus] >KGN56605.1 hypothetical protein Csa_009546 [Cucumis sativus]) HSP 1 Score: 526.6 bits (1355), Expect = 1.4e-145 Identity = 264/293 (90.10%), Postives = 281/293 (95.90%), Query Frame = 0
BLAST of Lag0020848 vs. NCBI nr
Match: XP_008438171.1 (PREDICTED: tRNA 2'-phosphotransferase 1 [Cucumis melo]) HSP 1 Score: 526.2 bits (1354), Expect = 1.8e-145 Identity = 265/293 (90.44%), Postives = 282/293 (96.25%), Query Frame = 0
BLAST of Lag0020848 vs. ExPASy Swiss-Prot
Match: Q5EAR5 (tRNA 2'-phosphotransferase 1 OS=Danio rerio OX=7955 GN=trpt1 PE=2 SV=2) HSP 1 Score: 151.4 bits (381), Expect = 1.6e-35 Identity = 91/225 (40.44%), Postives = 136/225 (60.44%), Query Frame = 0
BLAST of Lag0020848 vs. ExPASy Swiss-Prot
Match: O14045 (Putative tRNA 2'-phosphotransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC2C4.12c PE=3 SV=2) HSP 1 Score: 140.6 bits (353), Expect = 2.9e-32 Identity = 74/192 (38.54%), Postives = 118/192 (61.46%), Query Frame = 0
BLAST of Lag0020848 vs. ExPASy Swiss-Prot
Match: Q8K3A2 (tRNA 2'-phosphotransferase 1 OS=Mus musculus OX=10090 GN=Trpt1 PE=2 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 5.4e-31 Identity = 87/212 (41.04%), Postives = 127/212 (59.91%), Query Frame = 0
BLAST of Lag0020848 vs. ExPASy Swiss-Prot
Match: Q3ZBM7 (tRNA 2'-phosphotransferase 1 OS=Bos taurus OX=9913 GN=TRPT1 PE=2 SV=3) HSP 1 Score: 124.4 bits (311), Expect = 2.1e-27 Identity = 87/230 (37.83%), Postives = 131/230 (56.96%), Query Frame = 0
BLAST of Lag0020848 vs. ExPASy Swiss-Prot
Match: Q86TN4 (tRNA 2'-phosphotransferase 1 OS=Homo sapiens OX=9606 GN=TRPT1 PE=1 SV=2) HSP 1 Score: 121.3 bits (303), Expect = 1.8e-26 Identity = 91/250 (36.40%), Postives = 133/250 (53.20%), Query Frame = 0
BLAST of Lag0020848 vs. ExPASy TrEMBL
Match: A0A6J1CZ57 (2'-phosphotransferase OS=Momordica charantia OX=3673 GN=LOC111016108 PE=3 SV=1) HSP 1 Score: 533.1 bits (1372), Expect = 7.3e-148 Identity = 272/293 (92.83%), Postives = 281/293 (95.90%), Query Frame = 0
BLAST of Lag0020848 vs. ExPASy TrEMBL
Match: A0A5D3D3K0 (2'-phosphotransferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G003870 PE=3 SV=1) HSP 1 Score: 528.9 bits (1361), Expect = 1.4e-146 Identity = 266/293 (90.78%), Postives = 282/293 (96.25%), Query Frame = 0
BLAST of Lag0020848 vs. ExPASy TrEMBL
Match: A0A0A0L3T7 (2'-phosphotransferase OS=Cucumis sativus OX=3659 GN=Csa_3G126200 PE=3 SV=1) HSP 1 Score: 526.6 bits (1355), Expect = 6.8e-146 Identity = 264/293 (90.10%), Postives = 281/293 (95.90%), Query Frame = 0
BLAST of Lag0020848 vs. ExPASy TrEMBL
Match: A0A1S3AVU4 (2'-phosphotransferase OS=Cucumis melo OX=3656 GN=LOC103483358 PE=3 SV=1) HSP 1 Score: 526.2 bits (1354), Expect = 8.9e-146 Identity = 265/293 (90.44%), Postives = 282/293 (96.25%), Query Frame = 0
BLAST of Lag0020848 vs. ExPASy TrEMBL
Match: A0A6J1I9U5 (2'-phosphotransferase OS=Cucurbita maxima OX=3661 GN=LOC111472467 PE=3 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.4e-138 Identity = 257/293 (87.71%), Postives = 271/293 (92.49%), Query Frame = 0
BLAST of Lag0020848 vs. TAIR 10
Match: AT2G45330.1 (RNA 2'-phosphotransferase, Tpt1 / KptA family ) HSP 1 Score: 389.4 bits (999), Expect = 2.5e-108 Identity = 206/290 (71.03%), Postives = 241/290 (83.10%), Query Frame = 0
BLAST of Lag0020848 vs. TAIR 10
Match: AT2G45330.2 (RNA 2'-phosphotransferase, Tpt1 / KptA family ) HSP 1 Score: 379.8 bits (974), Expect = 2.0e-105 Identity = 203/290 (70.00%), Postives = 238/290 (82.07%), Query Frame = 0
BLAST of Lag0020848 vs. TAIR 10
Match: AT5G23600.1 (RNA 2'-phosphotransferase, Tpt1 / KptA family ) HSP 1 Score: 339.3 bits (869), Expect = 3.0e-93 Identity = 162/208 (77.88%), Postives = 187/208 (89.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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