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Lag0020818 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGCGAGCTTCAACGAATCATGGCCGTTGAGTCTGTATGACGATGTACAGACTTCAATCGACGTCAATTTTTGGGAGAGGAGACTTCGTGGAGGAGTGAAGTTCATTTTAATGGCAGGGTCGAAGGTGGAGAGAGTGAAGAGGAGAAGAGAAACAAACATGGGTTAGGAAGGGCATTTTCGTAAATTCTACGTTCAGAATACAACTTTTTGCTATTTTTGCAAATTCTTTTGCGGGCTGCTGTATGTGCAAATATTTTGGCCCAAATTGGTAGATTTGCAACCGGCCCTAAAAATTAAAATCCAAGTAAAAAACGCGCAAAAGGAAATAAAGCAGGTTCCGGCTTCCAGTTTCCAGTTTTCGATCGTCCACTGATCTCCGGCGTCTCCGCTCCCTCCAATAGAAGTTCCGGTGCCGTGAATCCGTAGAAAAGTTCATCAATCTCGCTAAAATCGTTGCCTGGTTAGAACTAAACTCTCTTCTTTCTTCCCTCTCACGTTTCACCTTATCTTTCGAAACGGAGCTCAATCTTCTCAACCATACACGACTGAAGCAGCACAGAGAATGAAGTTGTTGAAGAAATTTTGTTGCATGGTCAGAACTACCTTTCTTCTTTCGCCTTTCTCACCTTGTCTTTACGGATTGTTTGCTAACTGTATTTGTTTGCTTAGGAATGAGTTTCTTCAGAGGTGTAGTTGAATATATTGGGTCGATCTTCTCAGAAACGAGCTCAATTCACGATTCGCCGCAGAATCGTAGCCGCGAGGGTGCTTCAACCATGGATGACGTCAATGGATTTCCTGTTTCGAACGAGCGCTATGCTTCCAAGCTCAAAGGGTACTTCGATTTGTCAAAGGAGGAGATCGCCAAGGCCGTCAGAGCGGAGGAGTGGGGCTTGATCGAGGATGCGATCCTGCACTACCAGAATGCGCAACGCATTCTGGCTGAGGCCAGTTCAACTGCTGTGCCTTCGTTTATCAGTTCCAGGTATTTAGAATTCTGCCAATTTGCTGGATAATTGATTCCCAGTTCACCATTTTATCAATCTTGGCGGCAAACTGTAAATTTTGAGGTCTAAAAGGATAGGGAAGGAATCCATATCTGAAAATTGAGAAACAAATAAGTGGTAGCATATGGTCAAAGCGAGCTTAGCTTAGCGGTAATTGGCGTGTACCATCGACTATGAGGTCAGAGATTCGAATCTCCCGCCCCAAATTGTTGATGTACTAAAAAAAAATAAGTGGCAACATATGGCCAAAATTAGAAAATATTTGGAGTTTTAGTTTTAGTTATCACGTCTTGTCGTGCAGATTTTGAGGAAATAAATAACTTGGGAATCTTTTTCATTGTCACTTGTTTACTCTGTACAGTGTACACTAATCTGCTTCACGACTTGACAATATGCTATTGTCACCGTAGAATTTAGTCATTATTTCGTTATCTTTTTGTTTTACTGTGTACACTAATCTTTTATCGTTTATTATTTTGAAAACCATATCTGCTTTATACAATATTTTTTGCACCCCCTAGAAAAGATATTCCTATGAATTGATGGAATACCAGTCGAAGTTCATAGATATTGTGCTCTTTCTGCTCTATGTATGATCTACTATTCTTTTGTTTTCCAACAGCGAACAAGAGAAGGTGAAATCTCATAGACAAAAGATATCAAAGTGGCAAAGTCAAGTTTCGGAGAGATTACAAGCTCTAAATATGCGAGCAGGTTCAGTTATTGTCCTGTAATAACTTCATCAATTTCATCCACGATGATCTCGGTTGTCAGGGACATTTAATAACTTATAATCCTTCTCTTATTTTGCTGTCTTCTAAATTCAGGTGTTACATCCCTAAACAAGGTATAGTCTCATCTTTATGAAGTGTAAGTTTTCAATGTAAGATTCTATTATCTTACTTTAATTAGAAACATTGCTATTCCTCCTCCTCCTGGCGAGTAAATGCTTGAAATATACTATAAACCCTAAACTTGGATGACTTGAGCTTCAACTAGGAAAGAAAGAGAATGCAAACTTTTCTGGTATCTTATAAACTAGGTGTGTTAGGATTATTAACCAATGTAAGTAATTGATTATCTCTCTGGAGTTAGAAAAGCAGACTTTACAATCATTTGGCTGTATGCTTGATGTTTATTATTCTGAAAGTTTTTGATCAATCGTGTAAGCAGTGTTGCCTATCTATCTTATGGGAAAAAATATATTTTCATTATTATTATTATTATTATTATTATTATTCATATTTGAGATATGGTGCAGTTATATTAACATGATGGTTTCATATTCTATGTATTTTTATTTTATTTTATTAAATTTTATTCCAGAGCTCCTCGAATCACGTGCAAAGAGCTGGAATTGCTTCAACAATGCCAAATATTAAAAAGCCAGTGTTGAAGAGCTCTTCTCATAGTGGTGCAAGTAATCCAATAACGAGAAGTCAACCAGCTAATGTTGGAACTTCAAAATCTATGCAAGAAGTTCCTGATGGATATGATCCAAAATTGGTTGAAATGATAAATACAGCTATAGTGGATCGAAGTCCTTCTGTAAAATGGGACGATATTGGTAGTGCATTTTTTCCCTTTAACTTCTCATTTACTTCATTTCATTTCATTTTTTCTTTTTTACTCGTACTCTAATTGGACACTGATTGGTCTGGTTCAATTGTAGCTGGACTTCAGAAGGCAAAGCAAGCTTTATTGGAGATGGTTATTTTGCCCACAAAGAGAAGAGACTTATTCACTGGTCTCCGAAAGCCAGCCAGAGGTAGTGCTTTTAGAAACTGTCAATATACTGCTCTCCTAATACTTCTTTCAAGAGTAAAATAAAGTGCCATACCATCTTACACAAAATGGGTGGGTGCTGCACGAAGATTCATTGATCTGGACATCATACATTACTGCAAGTTTGTGGTTTATGTTGAAACAACAAGAATGATCACATTTGATTTGAATGCTTCATAAATGGGTAATTCAAACAATTTTTTTTATCTGATTAAAGGAGGATATAACAAACCAAAGGGAGTGCTAAAATAATACTCAGCACCTACACAACTTCATACTGATTTACTTAATTTTCTTGGTCTTTTCTAACATCTTAACTCGTCTGAGAAGCCTGTTGCAATTATAGTCTAAAAGCTGCTATGTCTTGTCATTTTCCTCCCCTTATTAGTTGGGTTTTTCAGTTTCTAGCTAGTCATGCTCCATATAGTAATCAAATCGATATTAAATTTTATTAAATATGTAGTTCTTAACTTATATTTGTGGAGGCCTCCTATGAAATTACCTTTTATTTCATGGAGGTCTAGGGGCTACTTATGTTGAAACTTATTTGTAAAATTACATTTATTGCTCTAAGTAATCATCGGTGACTGTAACATACCATCGTATCAGCACAATCTTAAGTCTTAAGCACATGCACGTTCATTTCAATTTTTTGCACATATCTTTTTATCTTCTAAAAAACAAGTCAAGTTTTTCCTTTTCTTATCCAAGTTCATTGTTTTAGAACCGAGCTTTTGGGAAGTTTTGTGACTTATCATTTATGTGGATCCAACATTGTCACATATTTCCTCAGGTCTTCTTCTCTTTGGTCCACCTGGTAATGGGAAGACTATGCTTGCTAAAGCTGTAGCTTCAGAATCAGAAGCCACCTTTTTTAACATGTCAGCCTCATCCTTAACATCAAAATGGGTATGTCTCAATTCCATTTTCGAGAATTATATTTCCTTGTGGAAAATTTCTTCCCGTGTATTTCCCTTCCAGTTATTATCCTTGCGAATTCTAATAAGCTGTATTTTCTCTAAGTTAGGAGAAAGTGAAAAGCTTGTAAGGACTCTCTTCATGGTTGCTAAGTCCAGGCAGCCCTCCGTAATTTTCATGGATGAAGTATGTCTCGTTTTCTTGCCAAACCATTATTTTAAGGACGAGATAATAGTACATTATTTTTGTATGCTCAATCATTCTGTTTTGTTTTGAGTGCAATTTAGTTTTTGGTTATTTGACATAAAAATAGATAATTCACCTCACACTTGTAAAGGGTTAGTTATTTAGTATTCTTAGCTTAGCTCTTGGACAATAGTTGAACTTTGGGATGCAGAAAATAGTTTTCCTTTTTTTTTTTTCCTGCTTTGCTGAGTTTCTAACTGCCATTATTTTTTAGAAGAGAAACAAAATTTCCTACCCACCTAAAGGTGCATTACAAGAAAGCTTCTCAAGTAGAAATGAAGGAAGAAGACTATAA ATGAGTGCGAGCTTCAACGAATCATGGCCGTTGAGTCTGTATGACGATGTACAGACTTCAATCGACGTCAATTTTTGGGAGAGGAGACTTCGTGGAGGAGTGAAGTTCATTTTAATGGCAGGGTCGAAGGTGGAGAGAGTGAAGAGGAGAAGAGAAACAAACATGGGAATGAGTTTCTTCAGAGGTGTAGTTGAATATATTGGGTCGATCTTCTCAGAAACGAGCTCAATTCACGATTCGCCGCAGAATCGTAGCCGCGAGGGTGCTTCAACCATGGATGACGTCAATGGATTTCCTGTTTCGAACGAGCGCTATGCTTCCAAGCTCAAAGGGTACTTCGATTTGTCAAAGGAGGAGATCGCCAAGGCCGTCAGAGCGGAGGAGTGGGGCTTGATCGAGGATGCGATCCTGCACTACCAGAATGCGCAACGCATTCTGGCTGAGGCCAGTTCAACTGCTGTGCCTTCGTTTATCAGTTCCAGCGAACAAGAGAAGGTGAAATCTCATAGACAAAAGATATCAAAGTGGCAAAGTCAAGTTTCGGAGAGATTACAAGCTCTAAATATGCGAGCAGGTGTTACATCCCTAAACAAGAGCTCCTCGAATCACGTGCAAAGAGCTGGAATTGCTTCAACAATGCCAAATATTAAAAAGCCAGTGTTGAAGAGCTCTTCTCATAGTGGTGCAAGTAATCCAATAACGAGAAGTCAACCAGCTAATGTTGGAACTTCAAAATCTATGCAAGAAGTTCCTGATGGATATGATCCAAAATTGGTTGAAATGATAAATACAGCTATAGTGGATCGAAGTCCTTCTGTAAAATGGGACGATATTGCTGGACTTCAGAAGGCAAAGCAAGCTTTATTGGAGATGGTTATTTTGCCCACAAAGAGAAGAGACTTATTCACTGGTCTCCGAAAGCCAGCCAGAGGTCTTCTTCTCTTTGGTCCACCTGGTAATGGGAAGACTATGCTTGCTAAAGCTGTAGCTTCAGAATCAGAAGCCACCTTTTTTAACATGTCAGCCTCATCCTTAACATCAAAATGGTTAGGAGAAAGTGAAAAGCTTGTAAGGACTCTCTTCATGGTTGCTAAGTCCAGGCAGCCCTCCGTAATTTTCATGGATGAAAAGAGAAACAAAATTTCCTACCCACCTAAAGGTGCATTACAAGAAAGCTTCTCAAGTAGAAATGAAGGAAGAAGACTATAA ATGAGTGCGAGCTTCAACGAATCATGGCCGTTGAGTCTGTATGACGATGTACAGACTTCAATCGACGTCAATTTTTGGGAGAGGAGACTTCGTGGAGGAGTGAAGTTCATTTTAATGGCAGGGTCGAAGGTGGAGAGAGTGAAGAGGAGAAGAGAAACAAACATGGGAATGAGTTTCTTCAGAGGTGTAGTTGAATATATTGGGTCGATCTTCTCAGAAACGAGCTCAATTCACGATTCGCCGCAGAATCGTAGCCGCGAGGGTGCTTCAACCATGGATGACGTCAATGGATTTCCTGTTTCGAACGAGCGCTATGCTTCCAAGCTCAAAGGGTACTTCGATTTGTCAAAGGAGGAGATCGCCAAGGCCGTCAGAGCGGAGGAGTGGGGCTTGATCGAGGATGCGATCCTGCACTACCAGAATGCGCAACGCATTCTGGCTGAGGCCAGTTCAACTGCTGTGCCTTCGTTTATCAGTTCCAGCGAACAAGAGAAGGTGAAATCTCATAGACAAAAGATATCAAAGTGGCAAAGTCAAGTTTCGGAGAGATTACAAGCTCTAAATATGCGAGCAGGTGTTACATCCCTAAACAAGAGCTCCTCGAATCACGTGCAAAGAGCTGGAATTGCTTCAACAATGCCAAATATTAAAAAGCCAGTGTTGAAGAGCTCTTCTCATAGTGGTGCAAGTAATCCAATAACGAGAAGTCAACCAGCTAATGTTGGAACTTCAAAATCTATGCAAGAAGTTCCTGATGGATATGATCCAAAATTGGTTGAAATGATAAATACAGCTATAGTGGATCGAAGTCCTTCTGTAAAATGGGACGATATTGCTGGACTTCAGAAGGCAAAGCAAGCTTTATTGGAGATGGTTATTTTGCCCACAAAGAGAAGAGACTTATTCACTGGTCTCCGAAAGCCAGCCAGAGGTCTTCTTCTCTTTGGTCCACCTGGTAATGGGAAGACTATGCTTGCTAAAGCTGTAGCTTCAGAATCAGAAGCCACCTTTTTTAACATGTCAGCCTCATCCTTAACATCAAAATGGTTAGGAGAAAGTGAAAAGCTTGTAAGGACTCTCTTCATGGTTGCTAAGTCCAGGCAGCCCTCCGTAATTTTCATGGATGAAAAGAGAAACAAAATTTCCTACCCACCTAAAGGTGCATTACAAGAAAGCTTCTCAAGTAGAAATGAAGGAAGAAGACTATAA MSASFNESWPLSLYDDVQTSIDVNFWERRLRGGVKFILMAGSKVERVKRRRETNMGMSFFRGVVEYIGSIFSETSSIHDSPQNRSREGASTMDDVNGFPVSNERYASKLKGYFDLSKEEIAKAVRAEEWGLIEDAILHYQNAQRILAEASSTAVPSFISSSEQEKVKSHRQKISKWQSQVSERLQALNMRAGVTSLNKSSSNHVQRAGIASTMPNIKKPVLKSSSHSGASNPITRSQPANVGTSKSMQEVPDGYDPKLVEMINTAIVDRSPSVKWDDIAGLQKAKQALLEMVILPTKRRDLFTGLRKPARGLLLFGPPGNGKTMLAKAVASESEATFFNMSASSLTSKWLGESEKLVRTLFMVAKSRQPSVIFMDEKRNKISYPPKGALQESFSSRNEGRRL Homology
BLAST of Lag0020818 vs. NCBI nr
Match: XP_023540720.1 (spastin isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 564.7 bits (1454), Expect = 6.4e-157 Identity = 297/320 (92.81%), Postives = 306/320 (95.62%), Query Frame = 0
BLAST of Lag0020818 vs. NCBI nr
Match: KAG7028649.1 (Spastin, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 562.8 bits (1449), Expect = 2.4e-156 Identity = 297/320 (92.81%), Postives = 305/320 (95.31%), Query Frame = 0
BLAST of Lag0020818 vs. NCBI nr
Match: XP_022146967.1 (spastin [Momordica charantia] >XP_022146968.1 spastin [Momordica charantia]) HSP 1 Score: 560.5 bits (1443), Expect = 1.2e-155 Identity = 293/320 (91.56%), Postives = 306/320 (95.62%), Query Frame = 0
BLAST of Lag0020818 vs. NCBI nr
Match: XP_022938685.1 (spastin [Cucurbita moschata]) HSP 1 Score: 559.3 bits (1440), Expect = 2.7e-155 Identity = 294/320 (91.88%), Postives = 304/320 (95.00%), Query Frame = 0
BLAST of Lag0020818 vs. NCBI nr
Match: XP_038877994.1 (spastin isoform X3 [Benincasa hispida]) HSP 1 Score: 552.7 bits (1423), Expect = 2.5e-153 Identity = 295/342 (86.26%), Postives = 316/342 (92.40%), Query Frame = 0
BLAST of Lag0020818 vs. ExPASy Swiss-Prot
Match: B2RYN7 (Spastin OS=Rattus norvegicus OX=10116 GN=Spast PE=1 SV=1) HSP 1 Score: 169.1 bits (427), Expect = 1.0e-40 Identity = 91/157 (57.96%), Postives = 116/157 (73.89%), Query Frame = 0
BLAST of Lag0020818 vs. ExPASy Swiss-Prot
Match: Q5ZK92 (Spastin OS=Gallus gallus OX=9031 GN=SPAST PE=2 SV=2) HSP 1 Score: 168.3 bits (425), Expect = 1.8e-40 Identity = 94/157 (59.87%), Postives = 112/157 (71.34%), Query Frame = 0
BLAST of Lag0020818 vs. ExPASy Swiss-Prot
Match: Q9QYY8 (Spastin OS=Mus musculus OX=10090 GN=Spast PE=1 SV=3) HSP 1 Score: 167.2 bits (422), Expect = 3.9e-40 Identity = 90/157 (57.32%), Postives = 115/157 (73.25%), Query Frame = 0
BLAST of Lag0020818 vs. ExPASy Swiss-Prot
Match: A2VDN5 (Spastin OS=Bos taurus OX=9913 GN=SPAST PE=2 SV=1) HSP 1 Score: 166.0 bits (419), Expect = 8.7e-40 Identity = 85/122 (69.67%), Postives = 100/122 (81.97%), Query Frame = 0
BLAST of Lag0020818 vs. ExPASy Swiss-Prot
Match: B3M301 (Spastin OS=Drosophila ananassae OX=7217 GN=spas PE=3 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 1.5e-39 Identity = 101/208 (48.56%), Postives = 138/208 (66.35%), Query Frame = 0
BLAST of Lag0020818 vs. ExPASy TrEMBL
Match: A0A6J1D123 (spastin OS=Momordica charantia OX=3673 GN=LOC111016034 PE=3 SV=1) HSP 1 Score: 560.5 bits (1443), Expect = 5.9e-156 Identity = 293/320 (91.56%), Postives = 306/320 (95.62%), Query Frame = 0
BLAST of Lag0020818 vs. ExPASy TrEMBL
Match: A0A6J1FKG3 (spastin OS=Cucurbita moschata OX=3662 GN=LOC111444835 PE=3 SV=1) HSP 1 Score: 559.3 bits (1440), Expect = 1.3e-155 Identity = 294/320 (91.88%), Postives = 304/320 (95.00%), Query Frame = 0
BLAST of Lag0020818 vs. ExPASy TrEMBL
Match: A0A5D3D3D3 (Spastin isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G004150 PE=3 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 3.3e-151 Identity = 291/342 (85.09%), Postives = 312/342 (91.23%), Query Frame = 0
BLAST of Lag0020818 vs. ExPASy TrEMBL
Match: A0A1S3AVR3 (spastin isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483336 PE=3 SV=1) HSP 1 Score: 544.7 bits (1402), Expect = 3.3e-151 Identity = 291/342 (85.09%), Postives = 312/342 (91.23%), Query Frame = 0
BLAST of Lag0020818 vs. ExPASy TrEMBL
Match: A0A0A0L4C5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G124960 PE=3 SV=1) HSP 1 Score: 543.9 bits (1400), Expect = 5.7e-151 Identity = 292/343 (85.13%), Postives = 314/343 (91.55%), Query Frame = 0
BLAST of Lag0020818 vs. TAIR 10
Match: AT2G45500.1 (AAA-type ATPase family protein ) HSP 1 Score: 370.9 bits (951), Expect = 1.3e-102 Identity = 203/321 (63.24%), Postives = 247/321 (76.95%), Query Frame = 0
BLAST of Lag0020818 vs. TAIR 10
Match: AT2G45500.2 (AAA-type ATPase family protein ) HSP 1 Score: 364.4 bits (934), Expect = 1.2e-100 Identity = 200/320 (62.50%), Postives = 245/320 (76.56%), Query Frame = 0
BLAST of Lag0020818 vs. TAIR 10
Match: AT3G27120.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 164.5 bits (415), Expect = 1.8e-40 Identity = 82/151 (54.30%), Postives = 106/151 (70.20%), Query Frame = 0
BLAST of Lag0020818 vs. TAIR 10
Match: AT2G27600.1 (AAA-type ATPase family protein ) HSP 1 Score: 148.7 bits (374), Expect = 1.0e-35 Identity = 74/128 (57.81%), Postives = 95/128 (74.22%), Query Frame = 0
BLAST of Lag0020818 vs. TAIR 10
Match: AT1G80350.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein ) HSP 1 Score: 140.6 bits (353), Expect = 2.8e-33 Identity = 70/156 (44.87%), Postives = 107/156 (68.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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