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Lag0020806 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGGAGAAGCAGAAGCTCCAAGGAGGGCTTATGGCGCTCCTCCAAGAGTCCCTCATGCTCCTCCTCGTCCTCGCATGGAGCCCGTCGATCGCGAAAAGGTTTTCTCTCTCTTTCCATCTCATCTCTACTTCTAGGGTTTCTGTTCCATTTCCGGCGTTCTCTTATATTTTTAATTTTGGTGTTCGTTAGCTTGTTATTAAATCCATTTTCATCTTCAATCGTTTTCTTGTTTATTGCTCTAAAATATCATAGGAATTTCGTTGTTCTGATGTTAATTCTTTGAAACTTCGAGTGTTGCCTTCTTCTTGGAAAACGTTTCTGTTTGACCATGATTTCTGTTGAAATCCTGCTTGTTCGCTACCTCGTAGTGTATGGAGCTGGCTGTTTAAACATAGATGAAAACTTTCACTTTCTGTGCTGAGTAATTTTGCTTCTCTTCTTGCAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGGTACGTTGTATTTTGATGCTGGCTTCTTGTTTTTATGAATTTTGTTTCGTTTCTCTGCAAAGTTGGAAAGAGATAAAGTATCCGAAAACAAGTGTGTTTCATCGCTTTAGTCCAGCCGATATATCAATTGGGATGAAATGATGCGCGTTGATGTCGAGGTTGTTATTCTTTTGTTTATGTCATCGTGGTGACAGATAGGAATTAGGGATCGGATGAGAGGATAATTGAAGCAAATTTCCCTGGTGTTGCGTTTTACATTTTGGCTGTGAGGCTATAATTCTCATTTATGATCTAGGCTCCTGGTTCTAAGTATTGCCACTTATTTGGATTATGGAAGCATCATTATGAAATTGAAATTTTCTATTATTGCAAACTTTTTACAGATTGGGAGTCATCATTTCAATGAAGACTTTGCTGTGAGAGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAGCTAACTGATCTGGTTGTGTTTCAAATTCCTTTTCAACCTTTTCTTCCTGCACGCTCTGCATGACATAAATACCAATAATCTGTTCTTTCTGAGTTCATTTCCATGCTGCCCCTTCATAGAAACTATTTCCCTTCCATTGCCCCTTGAACTTATGTTGTGTGTGTCTGTGGTTTTTTTCCTTGGGTGGGGGAGTTTACAGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCTAAACTATCTTTCGCGTTGGTTTATCCTGATAGACATGGACGGTTTCTAGTGAGAGAGGTATCGCTCTCTATCTTTCTGCTCTCTTTCTCCCACTCTCACATGCATGCACACATTTATGTTTTTTAGGATAGAGTACATTGGAAAAGATTCATGTTTCTTGGCCTTTTTTACTTTGTTGAATGTGCCAATTTTAGTTTTAATTTTATGAAATTGAACACACAAGTCGAGTAAGTGGTAATATTAGTAGTTTTATTAAGACCAGGCTAGAAATTACCCCTCACCCAATAATTAATTGTCCAAAATCCAGCCTAGAAGATACTCAAAATCAAGTCGTAACAATACTCGAATTCAACCAGGAAAAAGGCAAACTCAACAGTGTTACAAATTAAGCAATAAAAGTATAGCAACAAAGCGCCCAACAAATGCTTATCACAGCCATTTAAATGAGTACTTATACAAATACTTGGTCTAACTACAAGAATGCTACAAATGTCAAAAAAAAAAAAAAAAAAGAGTTCCCTAAGATGTCCTGACTTGATTGATTGGTTCAATACTACTTCATAGTCTTGAGAAAGTTTGAAGCGCACAATTTGTTGAAAGATAGGTAGATCTGTTTCTAGGATGTATTGACATACTGAACTTGCTGAACTTGTGCTTAAGTTGAGGTTATTCTTCCATGACTTCGATAGGGAAGCTTGTATTAATTTGATGCAGTTGAATGAAATTAGTCTGACCCAAAATCTTCTGTACTAAACTGTACTTCCCCTGTTGGAGTTTGCAGTTTCTTTAATTGTTAAGAATCGTACTTTATTCAATGTGGCTGTCACATCTAAACATTTGGCTGTATACTTTAATTGTTAAGAATCGTCTTTATTCAATGGGGCTTAAGTTTGTGATATACTTCAATTTGTGATAAATTGCCCGCCCTTGTTGAGTTTGAATGACATATACAAAGGTGGTATGAAGAAAGCGAACTATTATATCAGCTTCTGAGTATTCCAGATTCTATTTCTTTATGTAAAGGTAGGGAAGACATTCTCATTTGGAACTGGACGATTAGACGACAACTTGGCTTTGGCCGGACTTGGCTTTCAGGTAAAACAAACACGGCATTAGTTTTCGCCATATCAGCCCTCTATTTCTTCTCATACTTGCTGCATTTTTTGTGCACAGATTGGAGACTACTTGGATGTGGCCATCATATAG ATGGCGGGAGAAGCAGAAGCTCCAAGGAGGGCTTATGGCGCTCCTCCAAGAGTCCCTCATGCTCCTCCTCGTCCTCGCATGGAGCCCGTCGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGATTGGGAGTCATCATTTCAATGAAGACTTTGCTGTGAGAGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCTAAACTATCTTTCGCGTTGGTTTATCCTGATAGACATGGACGGTTTCTAGTGAGAGAGGTAGGGAAGACATTCTCATTTGGAACTGGACGATTAGACGACAACTTGGCTTTGGCCGGACTTGGCTTTCAGATTGGAGACTACTTGGATGTGGCCATCATATAG ATGGCGGGAGAAGCAGAAGCTCCAAGGAGGGCTTATGGCGCTCCTCCAAGAGTCCCTCATGCTCCTCCTCGTCCTCGCATGGAGCCCGTCGATCGCGAAAAGACTTGTCCTTTGCTGCTTCGTGTTTTTACGAAGATTGGGAGTCATCATTTCAATGAAGACTTTGCTGTGAGAGGCAAGGAGCCGAGGGATGAGGTTCAAATTTATACCTGGAAAGATGCTACTCTTCGCGAGCTAACTGATCTGGTCAAAGAGGTAGCTCCGGAAGCCAGGAGGAGAAATGCTAAACTATCTTTCGCGTTGGTTTATCCTGATAGACATGGACGGTTTCTAGTGAGAGAGGTAGGGAAGACATTCTCATTTGGAACTGGACGATTAGACGACAACTTGGCTTTGGCCGGACTTGGCTTTCAGATTGGAGACTACTTGGATGTGGCCATCATATAG MAGEAEAPRRAYGAPPRVPHAPPRPRMEPVDREKTCPLLLRVFTKIGSHHFNEDFAVRGKEPRDEVQIYTWKDATLRELTDLVKEVAPEARRRNAKLSFALVYPDRHGRFLVREVGKTFSFGTGRLDDNLALAGLGFQIGDYLDVAII Homology
BLAST of Lag0020806 vs. NCBI nr
Match: XP_022943948.1 (histone deacetylase complex subunit SAP18-like [Cucurbita moschata] >KAG6597180.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028645.1 Histone deacetylase complex subunit SAP18, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 290.8 bits (743), Expect = 6.6e-75 Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Lag0020806 vs. NCBI nr
Match: XP_023538738.1 (histone deacetylase complex subunit SAP18 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 290.8 bits (743), Expect = 6.6e-75 Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Lag0020806 vs. NCBI nr
Match: XP_022974173.1 (histone deacetylase complex subunit SAP18-like [Cucurbita maxima]) HSP 1 Score: 290.8 bits (743), Expect = 6.6e-75 Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0
BLAST of Lag0020806 vs. NCBI nr
Match: XP_022147400.1 (histone deacetylase complex subunit SAP18 [Momordica charantia]) HSP 1 Score: 285.8 bits (730), Expect = 2.1e-73 Identity = 138/148 (93.24%), Postives = 143/148 (96.62%), Query Frame = 0
BLAST of Lag0020806 vs. NCBI nr
Match: XP_038879427.1 (histone deacetylase complex subunit SAP18 [Benincasa hispida]) HSP 1 Score: 282.7 bits (722), Expect = 1.8e-72 Identity = 139/148 (93.92%), Postives = 143/148 (96.62%), Query Frame = 0
BLAST of Lag0020806 vs. ExPASy Swiss-Prot
Match: O64644 (Histone deacetylase complex subunit SAP18 OS=Arabidopsis thaliana OX=3702 GN=At2g45640 PE=1 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.3e-46 Identity = 100/150 (66.67%), Postives = 116/150 (77.33%), Query Frame = 0
BLAST of Lag0020806 vs. ExPASy Swiss-Prot
Match: Q3T022 (Histone deacetylase complex subunit SAP18 OS=Bos taurus OX=9913 GN=SAP18 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 9.7e-29 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of Lag0020806 vs. ExPASy Swiss-Prot
Match: O00422 (Histone deacetylase complex subunit SAP18 OS=Homo sapiens OX=9606 GN=SAP18 PE=1 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 9.7e-29 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of Lag0020806 vs. ExPASy Swiss-Prot
Match: Q5RDT5 (Histone deacetylase complex subunit SAP18 OS=Pongo abelii OX=9601 GN=SAP18 PE=2 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 9.7e-29 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0
BLAST of Lag0020806 vs. ExPASy Swiss-Prot
Match: O55128 (Histone deacetylase complex subunit SAP18 OS=Mus musculus OX=10090 GN=Sap18 PE=1 SV=1) HSP 1 Score: 127.5 bits (319), Expect = 1.3e-28 Identity = 65/121 (53.72%), Postives = 81/121 (66.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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