Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTACCCACCGGCACCGCCACAACTGTATGTCAATACACGTCACGTGAGAGAGAGCAAATAAAAGCTTCATCCATCAGGTTAGACAAATTGAAATGGGCCGTTAATTCGGCCCACAATGGCACAATCGGAATCACGTGCGGCGTTTCCCGCCATTGTTTATATTGTCATATTTGCCATTTGGAGCTCAATAACTTTCAAGCTTGGAAAGCCTTTCCATCTCTGTACTGCAAGCAAAACGATCGTTGGTTGCGATTCGCGATCGTTCTTTCAACTTCGCCTGCAGTTTTGATCGAACAGTTGAAGAGTTTTTGGCTTCTCAGTCTTTGCGCGGAAGGTGTTTCAATCAAATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCGATATCTGTTCTCCCTCCTCCATCCAGGTATGCATATTTTCTTATTTATTTTCAGCGTTCTATTTTGTTTGATTCGCGAGGATTCATCAAGCAATGCGCAAAGAAGTTTGGATTGCAATGTTGTTTATTATCACTAGCTTGACATTTTTTTTCCTTTATTTATCACGCTTCTGGCCGTTTATCGTGTTCCAAGTTCTGACGGATATGGATTTTTTTTAGCCTATCTACGTTCTTGATGTTTCAGAAGGAACTTATTGTCTCGGAGCTTTTAAGAGATTGACATTTTCAATACTTTTTACTACAGACTTCGAAATTTTACTTTCGCAGCTTAGTTCGATTCGTTCATTTTTATTGATGCAAGATTCAGTTACTTTAAGTTTGTGTTAAAGAAAAAAAAAAAAAAATTAGATAACTAAGACTTTGAAGTTTTCAGACTATAATCTTGTCATGACACTGCAAGTTGAGTTCGCTGCAAACGCGATCCAATGCCTTGAGTTTTACGTCACTGTTTTCGTCTGTTCCAGAGGAAACGCATATATTTTAAGGAAAATATGAAAATTCTCATGAGCGTATTCTAAAATGAAAATATGAATTTCCTTGCATGATCTGAAGGAGGTCAAATGCGTTAACTACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCGCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAGCTCTCTCAGAGCTCATTTGACGAAATCGTGACAAACGAACAGGTCAATCTCGGTTCTTCTCTGGATTTTCAGGTTGTAAAACTCTGTTTGTCTATAAAGAAATGGAGGAAAAGAAAGGAAATGACACTAAAGTTGCATGGCTCTCTGTCAGTCCGCTTCTACGTATTTCAGGCGTTAAATAGTGATCTAAATTATCGAGGAAGGAGAATTTTATATTTAAAAACTTTATTTTATGGTCATGCATTGGGTAACACAATAATCAATTTGATTATGCATATGATAAAATGATTAGCATCTTGGGATTCTTATCATGTTAATATTCTTGAGAACTGCTTAGAATTTATATGTTAACTCGTATATTTGTGATGATATTTGCTCGCATCTCTCCGCAAATAAAAGTCAGTCGAGTGTTTTTTTCATATGAAATAATTATCCTTTCTTTCATCTTTCTTCTTTTATCTGGATTGTAATTCCAACAAAAGAAAATTTCAAATCACAAACTGATCCTTTTGTTCAATTAGTGACATGACTTGACAAATTCTCACTCTCCGGGGTGAAAATCATTCAGTTGAAGTTCCAAATTTCTTATCCTAAAAAATGTTCTATTATCAGAAATTCTGAAAGTACTAGCATTGGAAACCAAACTAGGAAATGGCTGTTCTAATTATTTAGGAACTATTTACAATTTTATTTTATGTAGTTTATCTCTAATTTAAACTAATCAACAAGAAAATTGGAGATTATCTCTTGAATTTTAAGTTTAGTTTGAGCTTTTCATTTTTGTGTAATAAAATAGTTGTTGCTTCTGAGGAAAAATTAATGAGAAAGAGCGATCATCTTTCTTTTCCTTCTATTTAGTTGTCTGGAGAGAATACTTTACTAATTACTATTAAGCTTTCCTAACTTTTAGTTGAGTTACTGGTGTATGATCATCCATATATATACTGTATTGAATGAGGCTTTCTTGGATGTAACTGATACAACTTAAGAACATCTGGACATGCATCTTTCATGGTGATCATTATCTTTGAAAAAACATTTTTCTCCATAATAGATCATTCCTTCAATTCTTCATTTTGTAGAATACAATCATATGCATAAGGGTATTTATCCATTATCTCCGTTTACATTGCTTATTCTTGCTCCACTTATCGAACTTTGTACTCTTTAATACTAGTCTGCCCAATTATACATATTCCTGTCCCAATTGAGTTTATAAACTCGATCAGTTTGGAGTCTACATTTTCTTCCCACTCATCCGCAACAATTTTCTTCTCATCATGGTTTACATTGTTAGGACAAGAACCACATGATTCTATCGACTAAAAAACCAATTTATCGAACAGATTTTATACTACAGACAAACTGATTGCTAGTCAAGAGAAAGAGGACTTACGGAATACAAGGGACACAACTATGTATAATGGTTCGGCTTTAGAAAGCTTACAGTGAACACAGTAGCAATTCACTAAATATAGTTTGTGGTGATTTCAGAGGTAAGAGCAATTCTATAATGGAGGAAAATCATTCACATCTAGAAAGGAGCGCCAGGTTGCTACCTCGTTCATATCTGTCTTATCCCAGGTCTCAATATTATTTTCCCAATATTCTTCTAGCTAGTCACAACTCACAAATCCATCGTTTCAAGCATTGATTTTAGGATTTTCTTCACCTCGTTCGTATATGTCTTAGCCTAGCTTGCTACCAGCACCATTGTTCATCATATAGAAGGAGAAAGGTAACATTTGCTTTGCCTAGGGGTTAGAAGTAGACACAATTGTCACAATTGCTTCTGTTAAAGCCAATTTTTATAACAAATTCATCAGTTTTTTTAGACTAGTATCTAGGGTATAACTTCTCGTACCCTACTCATCTTACAAAATGATTGACCACATAACCACTCTACCTGATTTTTTTCCCAGCCATAACAAAAACAAAAAGTTGGCTGTCATGATGAACTCAGTGAGCTGGCAGGTTTTCAGCTACTCAGTGACACCTAAGCTTATGTTCATTTTGCAATGTCATACTAACTAGCTTCCTACAAACAGATACATGATAGGACTAATTTACAAAATGATTATATATATATTATTAAGAAAGCGCCATGATGAATGATTTTAGTTTCTCATGCAATAAGGATCTGACTATGCCGTCGTATTAACTTGAAATTAAGTTTTAGGATTCTAAGTGGTGTTCTTTCTGTGTTTGGAAGCTTATGACTCATTTTTTGATGTACCATTCTGTTTGGCAGAGATTTAGCTCTCAAGACCGAGAAAACTCGATTAAGAAGAATTCCTTTTTTCCTCCTCTAAGTTATTCCAGAGAAGATTGCCAATTGCCACTCTCTAAATCTTCGACCAGTCTAACACAAAAATGGAAATCAACTCCTCTTCCGGACTCCAAGTGTAAGTTCACTCTCTCGGACTCATATAATGGACACAAACTATTTCAATAAGTTTGTATGATTTCATTTAAGCGGGGTATAACTGTATGAGTAGGCAGGTTGGTCAGCGGTCATTGCTGACAACCTTTATATATTTACTGCGACTTGATTTCTGATAATTTTAGCTTTCCTTTTCAGGCCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAATTATAGAAAATTCATTAAGCAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGAATGAAGCAAATTTCTCTTGAAGGTGAGCGTTGTAATCCCTCAAGCTGAAAAGTAAAATATGAAGAGAAACTATGTATTAGTATTCTTGCTTGAAAAACACTTTCTGCATTGAAAGTTTGAAACCTGATGTGTCTGTTTCTCAACTAAGAATAAGGTGATGAATATGCTTTACTTGAAATTTTGATTCCTAGTAGGATTAAGATTGCTATATATGTTATAAGTAGGATTAATTCTGACCTCAAAGTTATTGCTTTAAGACCAAAAGTTTATTTAAATATATGATTATTTATTTTTCAAATTGCAGTGGAAGGCATATGGCAAAAGATGATCGTTAACAGTAGCTCGCTGCAATCCATGGTAAGAATTGTAGATCAATGCAATATTTTTTTGACCATTAAGTTCGTCTAATTTTAATCAGCATGTCTAAGTTGAATTCAACTAATAAGTGCAAAGTTTAATGTCAGAACAAAGAGCAAGATGACATCAAAGCTACCCTTGATGGAGGATTCAAATTGATATCCGATCAACTTAAGAAGGATGCACACCAAGAAAAGCTACATGAGATTTCCAATGTTCTTTCCGCATTGGAAAAGCAAGTACAAGCATCTCAACTGAAATTAAAAAACGACTTCATCAGCACATTCACACAAGAAATGAAGGTAAGTGCATGCTGTATCAAGTATTGCTACAAATGCACGATAAAAAGGATTTGCCTCCTAACTCCATTGCTATGAAATGGGGTGTTTATATATTATATATATATATTTGCAATAGTACCCTGCCCAAATTTTTGTTCTTTGATTGTTTTAATATCTCATGTAAATGCCACTTTGCAGTCTCGTAACTTACTGGTTATTCTTCAATTACTTGTAGGCAATGGCCTGTAACTTGAAGAAGCCATTTCAGAAATTTTCACCTCACTCTATTCAATCTCCTGAGGTTCGGTTTCTTACTAAATATTGGTCAAATATTTTAAGCATTTGTTTCATTCTGAACATTTCCTCATGGAAATCATTACTTGCAAATGTCAGAGTACTGGTTGTTTGGATGTTCCACAGCAAAAGCGACATCGATGTAAAATGTATGAATCTCAGTTTTCATAATAACTGGCTTAATACCTAGTATGTCATGCATTTCATGTTTGTAAAGTTACCGTTCTATATTAAATGATTGAATTACTGATTATAGTGAACGGGTTTAGATTGAATCGATGTATACCAATCTGGGAGTTAATCTTTTCCCTTCTAATGCACAAAATGTAGAATTTCATGCGGCCTATGACATATAATGATCGATACAAGCTCAAAAGTTTCTTTCACTTCCTGTATATTTTATGACTATGTTATACAGCAGTCTGGAAGTTCTCAAAGGAATTATTGTGTTATATTCTATTAAATTCTATCATTTGGCATTTGAAGCACATGCGAGGAGGAAAGAAAATCCCCATTTTTCAATAATATTATCTTAATATGACATGAAAAATCATACTTTTGGGCAGCTACAAGGCTCTGGTGATTGTTAATGAACTATGGAATTATATGCAGTGGTCTTCTGTTATTTAGCATCTTAAGAGAGCTTACCTTTTCCTCTTAATATCAGCCAATCTGCGTCTCCAAATGTTTGCATTCGATCAACTGCAGTACAGAACGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTGGGAAAGACTTTTTGCACTAGTAGTGTGGTGAAGAAGGAAGATGCAAAGAAATCAATTCCATTTTCTGAACAGGTAGTCATTCAAATTTCCTTATTTATTTATTTATTTATTTTGTTGTAAATTTTTTTTCCTGCCATCTCATTACTATTTATTGCGGAAATTGTGTAATTGTATTTTTGAAAGCCAATATTAAGCTATTCCCTGATTATTGAACCCGGAAGTTTATTATTCTATGAAGCGAGTAAAGATTTCACCTTGAATATTAGCAGTGCATGGTGCTGGAAAGAGAATATAGAGTTATTGTCGATTCCGATGAGGAGATCGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGGAAATAA
mRNA sequence
ATGTACCCACCGGCACCGCCACAACTCTTGGAAAGCCTTTCCATCTCTGTACTGCAAGCAAAACGATCGTTGGTTGCGATTCGCGATCGTTCTTTCAACTTCGCCTGCAGTTTTGATCGAACAGTTGAAGAGTTTTTGGCTTCTCAGTCTTTGCGCGGAAGGTGTTTCAATCAAATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCGATATCTGTTCTCCCTCCTCCATCCAGGAGGTCAAATGCGTTAACTACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCGCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAGCTCTCTCAGAGCTCATTTGACGAAATCGTGACAAACGAACAGGTCAATCTCGGTTCTTCTCTGGATTTTCAGAGATTTAGCTCTCAAGACCGAGAAAACTCGATTAAGAAGAATTCCTTTTTTCCTCCTCTAAGTTATTCCAGAGAAGATTGCCAATTGCCACTCTCTAAATCTTCGACCAGTCTAACACAAAAATGGAAATCAACTCCTCTTCCGGACTCCAAGTGCCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAATTATAGAAAATTCATTAAGCAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGAATGAAGCAAATTTCTCTTGAAGTGGAAGGCATATGGCAAAAGATGATCGTTAACAGTAGCTCGCTGCAATCCATGAACAAAGAGCAAGATGACATCAAAGCTACCCTTGATGGAGGATTCAAATTGATATCCGATCAACTTAAGAAGGATGCACACCAAGAAAAGCTACATGAGATTTCCAATGTTCTTTCCGCATTGGAAAAGCAAGTACAAGCATCTCAACTGAAATTAAAAAACGACTTCATCAGCACATTCACACAAGAAATGAAGGCAATGGCCTGTAACTTGAAGAAGCCATTTCAGAAATTTTCACCTCACTCTATTCAATCTCCTGAGAGTACTGGTTGTTTGGATGTTCCACAGCAAAAGCGACATCGATGTAAAATCCAATCTGCGTCTCCAAATGTTTGCATTCGATCAACTGCAGTACAGAACGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTGGGAAAGACTTTTTGCACTAGTAGTGTGGTGAAGAAGGAAGATGCAAAGAAATCAATTCCATTTTCTGAACAGTGCATGGTGCTGGAAAGAGAATATAGAGTTATTGTCGATTCCGATGAGGAGATCGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGGAAATAA
Coding sequence (CDS)
ATGTACCCACCGGCACCGCCACAACTCTTGGAAAGCCTTTCCATCTCTGTACTGCAAGCAAAACGATCGTTGGTTGCGATTCGCGATCGTTCTTTCAACTTCGCCTGCAGTTTTGATCGAACAGTTGAAGAGTTTTTGGCTTCTCAGTCTTTGCGCGGAAGGTGTTTCAATCAAATGCGGCTGAAGATAAACAAGGCCTGCGATCTCAGCTCGATATCTGTTCTCCCTCCTCCATCCAGGAGGTCAAATGCGTTAACTACTGGGCAGCAAGCACCACAGTTGCGATCACAACCTTCGCAACAATCCTTTTCGCAGGGACTGTCATCTCAGCACGGCATGTATTCTCAGCTCTCTCAGAGCTCATTTGACGAAATCGTGACAAACGAACAGGTCAATCTCGGTTCTTCTCTGGATTTTCAGAGATTTAGCTCTCAAGACCGAGAAAACTCGATTAAGAAGAATTCCTTTTTTCCTCCTCTAAGTTATTCCAGAGAAGATTGCCAATTGCCACTCTCTAAATCTTCGACCAGTCTAACACAAAAATGGAAATCAACTCCTCTTCCGGACTCCAAGTGCCAAGTTGGTGAAGAACTTGACCGCCGCCTTGGAATTATAGAAAATTCATTAAGCAAGTTTGGAAAGATCTTGGATTCTCTTCACAGTGATATCCTGCAACTAAACAAAGGAATGAAGCAAATTTCTCTTGAAGTGGAAGGCATATGGCAAAAGATGATCGTTAACAGTAGCTCGCTGCAATCCATGAACAAAGAGCAAGATGACATCAAAGCTACCCTTGATGGAGGATTCAAATTGATATCCGATCAACTTAAGAAGGATGCACACCAAGAAAAGCTACATGAGATTTCCAATGTTCTTTCCGCATTGGAAAAGCAAGTACAAGCATCTCAACTGAAATTAAAAAACGACTTCATCAGCACATTCACACAAGAAATGAAGGCAATGGCCTGTAACTTGAAGAAGCCATTTCAGAAATTTTCACCTCACTCTATTCAATCTCCTGAGAGTACTGGTTGTTTGGATGTTCCACAGCAAAAGCGACATCGATGTAAAATCCAATCTGCGTCTCCAAATGTTTGCATTCGATCAACTGCAGTACAGAACGAGGAAGTGGGAAGGTGGAAATCAGTAAAAGTGGGAAAGACTTTTTGCACTAGTAGTGTGGTGAAGAAGGAAGATGCAAAGAAATCAATTCCATTTTCTGAACAGTGCATGGTGCTGGAAAGAGAATATAGAGTTATTGTCGATTCCGATGAGGAGATCGAAAGAAGTTTCTCCTGCTTAATTGAAGAGAAGAAAACAGGTGATTCCTGGAAATAA
Protein sequence
MYPPAPPQLLESLSISVLQAKRSLVAIRDRSFNFACSFDRTVEEFLASQSLRGRCFNQMRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLSQSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSKSSTSLTQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQISLEVEGIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSALEKQVQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRHRCKIQSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYRVIVDSDEEIERSFSCLIEEKKTGDSWK
Homology
BLAST of Lag0020752 vs. NCBI nr
Match:
XP_038882642.1 (putative recombination initiation defects 3 isoform X2 [Benincasa hispida])
HSP 1 Score: 647.5 bits (1669), Expect = 8.3e-182
Identity = 338/384 (88.02%), Postives = 356/384 (92.71%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 118
MRLKINKACDLSSISVLPP SRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS
Sbjct: 1 MRLKINKACDLSSISVLPPHSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60
Query: 119 QSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSKSSTSL 178
Q+SFDE+VTNE QRFSSQDRENSIKKNSFFPPLSYSREDCQL LSKSSTSL
Sbjct: 61 QNSFDEVVTNE----------QRFSSQDRENSIKKNSFFPPLSYSREDCQLALSKSSTSL 120
Query: 179 TQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQISLEVE 238
TQ+WK TPLPDSKCQVGEELDRRLG IENSL+KFGKILDSLHSDILQLNKGMKQISL+VE
Sbjct: 121 TQRWKPTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVE 180
Query: 239 GIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSALEKQ 298
GIWQKM+VNSSSLQSMNK+ DD+KATLDGGFKLIS+QLKKDA+QE+L+EISNVLS+LEKQ
Sbjct: 181 GIWQKMLVNSSSLQSMNKDHDDMKATLDGGFKLISNQLKKDAYQERLNEISNVLSSLEKQ 240
Query: 299 VQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRHRCKI 358
VQASQLKLKNDFISTFTQE+KAM C LK P QKF PHSIQSPEST CLDVPQQKRHRCKI
Sbjct: 241 VQASQLKLKNDFISTFTQEIKAMVCTLKNPLQKFPPHSIQSPESTACLDVPQQKRHRCKI 300
Query: 359 QSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYR 418
QSASPNVCIR+T VQ EEVGRWKSVKVGKTFCT SV KK+D KK IPFSEQ +VLEREYR
Sbjct: 301 QSASPNVCIRATTVQKEEVGRWKSVKVGKTFCTGSVAKKDDPKKVIPFSEQRLVLEREYR 360
Query: 419 VIVDSDEEIERSFSCLIEEKKTGD 443
VIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 VIVDSDEEIERSFSCLIEEKKTGE 374
BLAST of Lag0020752 vs. NCBI nr
Match:
XP_038882627.1 (putative recombination initiation defects 3 isoform X1 [Benincasa hispida] >XP_038882635.1 putative recombination initiation defects 3 isoform X1 [Benincasa hispida])
HSP 1 Score: 642.9 bits (1657), Expect = 2.1e-180
Identity = 338/385 (87.79%), Postives = 356/385 (92.47%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 118
MRLKINKACDLSSISVLPP SRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS
Sbjct: 1 MRLKINKACDLSSISVLPPHSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60
Query: 119 QSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSKSSTSL 178
Q+SFDE+VTNE QRFSSQDRENSIKKNSFFPPLSYSREDCQL LSKSSTSL
Sbjct: 61 QNSFDEVVTNE----------QRFSSQDRENSIKKNSFFPPLSYSREDCQLALSKSSTSL 120
Query: 179 TQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQISLEVE 238
TQ+WK TPLPDSKCQVGEELDRRLG IENSL+KFGKILDSLHSDILQLNKGMKQISL+VE
Sbjct: 121 TQRWKPTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHSDILQLNKGMKQISLDVE 180
Query: 239 GIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSALEKQ 298
GIWQKM+VNSSSLQSMNK+ DD+KATLDGGFKLIS+QLKKDA+QE+L+EISNVLS+LEKQ
Sbjct: 181 GIWQKMLVNSSSLQSMNKDHDDMKATLDGGFKLISNQLKKDAYQERLNEISNVLSSLEKQ 240
Query: 299 VQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRHRCKI 358
VQASQLKLKNDFISTFTQE+KAM C LK P QKF PHSIQSPEST CLDVPQQKRHRCKI
Sbjct: 241 VQASQLKLKNDFISTFTQEIKAMVCTLKNPLQKFPPHSIQSPESTACLDVPQQKRHRCKI 300
Query: 359 QSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSE-QCMVLEREY 418
QSASPNVCIR+T VQ EEVGRWKSVKVGKTFCT SV KK+D KK IPFSE Q +VLEREY
Sbjct: 301 QSASPNVCIRATTVQKEEVGRWKSVKVGKTFCTGSVAKKDDPKKVIPFSEQQRLVLEREY 360
Query: 419 RVIVDSDEEIERSFSCLIEEKKTGD 443
RVIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 RVIVDSDEEIERSFSCLIEEKKTGE 375
BLAST of Lag0020752 vs. NCBI nr
Match:
KAG6597127.1 (putative recombination initiation defects 3, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 628.6 bits (1620), Expect = 4.0e-176
Identity = 332/387 (85.79%), Postives = 353/387 (91.21%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 118
MRLKINKACDLSSISVLPP S RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG SQ S
Sbjct: 1 MRLKINKACDLSSISVLPPQS-RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 119 QSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSKSSTSL 178
Q+SFDE+VTNE QRFSSQDRENSIKKNSFFPPLSYSRE+CQLPLSKSSTSL
Sbjct: 61 QNSFDEVVTNE----------QRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSL 120
Query: 179 TQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQISLEVE 238
TQ+WKSTPLPDSKCQVGEELDRRLG IENSL+KFGKILDSLH DIL LN+GMKQISL+VE
Sbjct: 121 TQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVE 180
Query: 239 GIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSALEKQ 298
GIWQK+IVNSS LQSMNKE DD+K+TLDGGFKLISDQLKKDA+QE+LHEIS+VLSALEKQ
Sbjct: 181 GIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQ 240
Query: 299 VQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRHRCKI 358
VQASQLKL+NDFISTFTQEMKAM C LKKP QKF I+SPEST LDVPQQKR RCKI
Sbjct: 241 VQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKI 300
Query: 359 QSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYR 418
QSASP+VCIR+TAVQ EEVGRWKSVKVGKTFCTS+V KKEDAKK+IPFSEQ +V+EREYR
Sbjct: 301 QSASPDVCIRATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYR 360
Query: 419 VIVDSDEEIERSFSCLIEEKKTGDSWK 446
VIVDSDEEIERSFSCLIEEKKTGDSWK
Sbjct: 361 VIVDSDEEIERSFSCLIEEKKTGDSWK 376
BLAST of Lag0020752 vs. NCBI nr
Match:
XP_022943725.1 (protein PAIR1 isoform X1 [Cucurbita moschata])
HSP 1 Score: 623.6 bits (1607), Expect = 1.3e-174
Identity = 328/384 (85.42%), Postives = 350/384 (91.15%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 118
MRLKINKACDLSSISVLPP S RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG SQ S
Sbjct: 1 MRLKINKACDLSSISVLPPQSSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 119 QSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSKSSTSL 178
Q+SFDE+VTNE QRFSSQDRENSIKKNSFFPPLSYSRE+CQLPLSKSSTSL
Sbjct: 61 QNSFDEVVTNE----------QRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSL 120
Query: 179 TQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQISLEVE 238
TQ+WKSTPLPDSKCQVGEELDRRLG IENSL+KFGKILDSLH DIL LN+GMKQISL+VE
Sbjct: 121 TQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVE 180
Query: 239 GIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSALEKQ 298
GIWQK+IVNSS LQSMNKE DD+K+TLDGGFKLISDQLKKDA+QE+LHEIS+VLSALEKQ
Sbjct: 181 GIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQ 240
Query: 299 VQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRHRCKI 358
VQASQLKL+NDFISTFTQEMKAM C LKKP QKF I+SPEST LDVPQQKR RCKI
Sbjct: 241 VQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKI 300
Query: 359 QSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYR 418
QSASP+VCIR+TAVQ EEVGRWKSVKVGKTFCTS+V KKEDAKK+IPFSEQ +V+EREYR
Sbjct: 301 QSASPDVCIRATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYR 360
Query: 419 VIVDSDEEIERSFSCLIEEKKTGD 443
VIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 VIVDSDEEIERSFSCLIEEKKTGE 374
BLAST of Lag0020752 vs. NCBI nr
Match:
KAG7028594.1 (Protein PAIR1, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 621.3 bits (1601), Expect = 6.4e-174
Identity = 331/398 (83.17%), Postives = 355/398 (89.20%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 118
MRLKINKACDLSSISVLPP S RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG SQ S
Sbjct: 1 MRLKINKACDLSSISVLPPQS-RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 119 QSSFDEIVTNEQVNLGSSLDF---------------QRFSSQDRENSIKKNSFFPPLSYS 178
Q+SFDE+VTNEQ+ + S + F QRFSSQDRENSIKKNSFFPPLSYS
Sbjct: 61 QNSFDEVVTNEQLQVTSGVLFVFISYDLTLTYHSVWQRFSSQDRENSIKKNSFFPPLSYS 120
Query: 179 REDCQLPLSKSSTSLTQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDI 238
RE+CQLPLSKSSTSLTQ+WKSTPLPDSKCQVGEELDRRLG IENSL+KFGKILDSLH DI
Sbjct: 121 REECQLPLSKSSTSLTQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDI 180
Query: 239 LQLNKGMKQISLEVEGIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQE 298
L LN+GMKQISL+VEGIWQK+IVNSS LQSMNKE DD+K+TLDGGFKLISDQLKKDA+QE
Sbjct: 181 LHLNQGMKQISLDVEGIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQE 240
Query: 299 KLHEISNVLSALEKQVQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPEST 358
+LHEIS+VLSALEKQVQASQLKL+NDFISTFTQEMKAM C LKKP QKF I+SPEST
Sbjct: 241 RLHEISDVLSALEKQVQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPEST 300
Query: 359 GCLDVPQQKRHRCKIQSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKS 418
LDVPQQKR RCKIQSASP+VCIR+TAVQ EEVGRWKSVKVGKTFCTS+V KKEDAKK+
Sbjct: 301 ASLDVPQQKRRRCKIQSASPDVCIRATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKA 360
Query: 419 IPFSEQCMVLEREYRVIVDSDEEIERSFSCLIEEKKTG 442
IPFSEQ +V+EREYRVIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 IPFSEQRLVVEREYRVIVDSDEEIERSFSCLIEEKKTG 397
BLAST of Lag0020752 vs. ExPASy Swiss-Prot
Match:
Q0WWX5 (Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=PRD3 PE=1 SV=2)
HSP 1 Score: 230.3 bits (586), Expect = 4.2e-59
Identity = 163/443 (36.79%), Postives = 246/443 (55.53%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GMYS 118
M++ INKACDL SISV PP RRS Q + QLRSQ SQQSFSQG SS G +S
Sbjct: 1 MKMNINKACDLKSISVFPPNLRRS---AEPQASQQLRSQQSQQSFSQGPSSSQRGCGGFS 60
Query: 119 QLSQSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKK-NSFFPPLSYSREDCQLPLSKS 178
Q++QSS DE++ N+ QRFSSQ+R+ S+KK +S PP+++ RED QL S+S
Sbjct: 61 QMTQSSIDELLIND----------QRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRS 120
Query: 179 STSLTQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQIS 238
S+ L+++W S + +SK Q+ EEL++R G++E SLS+FG +LDS+ SDI+Q N+G K++
Sbjct: 121 SSGLSRRWSSASIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVF 180
Query: 239 LEVEGIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSA 298
LE E I QK+ + +SLQ + KEQ D KA+LDGG K I ++ KD +QEKL +I +L+
Sbjct: 181 LETERIQQKLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTT 240
Query: 299 LEKQVQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRH 358
+ +QV+ + K++ + TFT+E++ +A +L+ P + + +P+ ++P+Q+
Sbjct: 241 IPEQVETALQKIQREICHTFTREIQVLA-SLRTPEPRVRVPT--APQVKAKENLPEQRGQ 300
Query: 359 RCKIQSA----SPNVCIRSTAVQNE----------------------------------- 418
K+ ++ P V + + E
Sbjct: 301 AAKVLTSLKMPEPRVQVPAAPQAKENFPEQRGPVAKSNSFCNTTLKTKQPQFPRNPNDAS 360
Query: 419 ------------EVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYRVIVDS 446
+VG WK+VK K S KK +K + SE + V++DS
Sbjct: 361 ARAVKPYLSPKIQVGCWKTVKPEK-----SNFKKRATRKPVK-SESTRTQFEQCSVVIDS 420
BLAST of Lag0020752 vs. ExPASy Swiss-Prot
Match:
Q75RY2 (Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1)
HSP 1 Score: 122.5 bits (306), Expect = 1.2e-26
Identity = 105/262 (40.08%), Postives = 147/262 (56.11%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPP--PSRRSNALTTGQQAPQLRSQP-------SQQSFSQGLSS 118
M+LK+NKACD++SISVLPP S A +G A + SQP SQQSFSQG S+
Sbjct: 1 MKLKMNKACDIASISVLPPRRTGGSSGASASGSVAVAVASQPRSQPLSQSQQSFSQGASA 60
Query: 119 Q--HGMYSQLSQSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYS--RE 178
H SQ SQ S D+ N L S QRF D +S K+ S P S S RE
Sbjct: 61 SLLHSQ-SQFSQVSLDD---NLLTLLPSPTRDQRFGLHD--DSSKRMSSLPASSASCARE 120
Query: 179 DCQLPLSKSSTSLTQKWKSTPLPDSKCQV-GEELDRRLGIIENSLSKFGKILDSLHSDIL 238
+ QL L+K ++ +W + QV E+++R+ + +S+ K G ++DS+ SD++
Sbjct: 121 ESQLQLAKLPSNPVHRWNPSIADTRSGQVTNEDVERKFQHLASSVHKMGMVVDSVQSDVM 180
Query: 239 QLNKGMKQISLEVEGIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLK-KDAHQE 298
QLN+ MK+ SL+ I QK+ V SSLQ + K QDD+KA K DQ ++
Sbjct: 181 QLNRAMKEASLDSGSIRQKIAVLESSLQQILKGQDDLKALFGSSTKHNPDQTSVLNSLGS 240
Query: 299 KLHEISNVLSALEKQVQASQLK 306
KL+EIS+ L+ L+ Q+QA QL+
Sbjct: 241 KLNEISSTLATLQTQMQARQLQ 256
BLAST of Lag0020752 vs. ExPASy TrEMBL
Match:
A0A6J1FY69 (protein PAIR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1)
HSP 1 Score: 623.6 bits (1607), Expect = 6.2e-175
Identity = 328/384 (85.42%), Postives = 350/384 (91.15%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 118
MRLKINKACDLSSISVLPP S RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG SQ S
Sbjct: 1 MRLKINKACDLSSISVLPPQSSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 119 QSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSKSSTSL 178
Q+SFDE+VTNE QRFSSQDRENSIKKNSFFPPLSYSRE+CQLPLSKSSTSL
Sbjct: 61 QNSFDEVVTNE----------QRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSL 120
Query: 179 TQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQISLEVE 238
TQ+WKSTPLPDSKCQVGEELDRRLG IENSL+KFGKILDSLH DIL LN+GMKQISL+VE
Sbjct: 121 TQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVE 180
Query: 239 GIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSALEKQ 298
GIWQK+IVNSS LQSMNKE DD+K+TLDGGFKLISDQLKKDA+QE+LHEIS+VLSALEKQ
Sbjct: 181 GIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQ 240
Query: 299 VQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRHRCKI 358
VQASQLKL+NDFISTFTQEMKAM C LKKP QKF I+SPEST LDVPQQKR RCKI
Sbjct: 241 VQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKI 300
Query: 359 QSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYR 418
QSASP+VCIR+TAVQ EEVGRWKSVKVGKTFCTS+V KKEDAKK+IPFSEQ +V+EREYR
Sbjct: 301 QSASPDVCIRATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYR 360
Query: 419 VIVDSDEEIERSFSCLIEEKKTGD 443
VIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 VIVDSDEEIERSFSCLIEEKKTGE 374
BLAST of Lag0020752 vs. ExPASy TrEMBL
Match:
A0A6J1FTV4 (protein PAIR1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1)
HSP 1 Score: 619.8 bits (1597), Expect = 9.0e-174
Identity = 328/384 (85.42%), Postives = 350/384 (91.15%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 118
MRLKINKACDLSSISVLPP S RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG SQ S
Sbjct: 1 MRLKINKACDLSSISVLPPQS-RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 119 QSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSKSSTSL 178
Q+SFDE+VTNE QRFSSQDRENSIKKNSFFPPLSYSRE+CQLPLSKSSTSL
Sbjct: 61 QNSFDEVVTNE----------QRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSL 120
Query: 179 TQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQISLEVE 238
TQ+WKSTPLPDSKCQVGEELDRRLG IENSL+KFGKILDSLH DIL LN+GMKQISL+VE
Sbjct: 121 TQRWKSTPLPDSKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVE 180
Query: 239 GIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSALEKQ 298
GIWQK+IVNSS LQSMNKE DD+K+TLDGGFKLISDQLKKDA+QE+LHEIS+VLSALEKQ
Sbjct: 181 GIWQKVIVNSSLLQSMNKEHDDMKSTLDGGFKLISDQLKKDAYQERLHEISDVLSALEKQ 240
Query: 299 VQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRHRCKI 358
VQASQLKL+NDFISTFTQEMKAM C LKKP QKF I+SPEST LDVPQQKR RCKI
Sbjct: 241 VQASQLKLRNDFISTFTQEMKAMVCTLKKPLQKFPHRPIESPESTASLDVPQQKRRRCKI 300
Query: 359 QSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYR 418
QSASP+VCIR+TAVQ EEVGRWKSVKVGKTFCTS+V KKEDAKK+IPFSEQ +V+EREYR
Sbjct: 301 QSASPDVCIRATAVQTEEVGRWKSVKVGKTFCTSTVAKKEDAKKAIPFSEQRLVVEREYR 360
Query: 419 VIVDSDEEIERSFSCLIEEKKTGD 443
VIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 VIVDSDEEIERSFSCLIEEKKTGE 373
BLAST of Lag0020752 vs. ExPASy TrEMBL
Match:
A0A6J1IBT5 (protein PAIR1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473283 PE=4 SV=1)
HSP 1 Score: 617.8 bits (1592), Expect = 3.4e-173
Identity = 327/384 (85.16%), Postives = 348/384 (90.62%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 118
MRLKINKACDLSSISVLPP S RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG SQ S
Sbjct: 1 MRLKINKACDLSSISVLPPQSSRSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 119 QSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSKSSTSL 178
Q+SFDE+VTNE QRFSSQDRENSIKKNSFFPPLSYSRE+CQLPLSKSSTSL
Sbjct: 61 QNSFDEVVTNE----------QRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSL 120
Query: 179 TQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQISLEVE 238
TQ+WKSTPLPD KCQVGEELDRRLG IENSL+KFGKILDSLH DIL LN+GMKQISL+VE
Sbjct: 121 TQRWKSTPLPDYKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVE 180
Query: 239 GIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSALEKQ 298
GIWQK+IVNSS LQSMNKE DD+KATLDGGFKLISDQLKKDA+Q++LHEIS+VLSALEKQ
Sbjct: 181 GIWQKVIVNSSLLQSMNKEHDDMKATLDGGFKLISDQLKKDAYQDRLHEISDVLSALEKQ 240
Query: 299 VQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRHRCKI 358
VQASQLKLKNDFIS FTQEMKAM C LKK QKF I+SPEST LDVPQQKR RCKI
Sbjct: 241 VQASQLKLKNDFISIFTQEMKAMVCTLKKLLQKFPHRPIESPESTASLDVPQQKRRRCKI 300
Query: 359 QSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYR 418
QSASP+VCIR+TAVQ EE+GRWKSVKVGKTFCTS+VVKKEDAKK+IPFSEQ +VLEREYR
Sbjct: 301 QSASPDVCIRATAVQTEELGRWKSVKVGKTFCTSTVVKKEDAKKAIPFSEQRLVLEREYR 360
Query: 419 VIVDSDEEIERSFSCLIEEKKTGD 443
VIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 VIVDSDEEIERSFSCLIEEKKTGE 374
BLAST of Lag0020752 vs. ExPASy TrEMBL
Match:
A0A1S3AVJ5 (protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1)
HSP 1 Score: 617.8 bits (1592), Expect = 3.4e-173
Identity = 323/383 (84.33%), Postives = 346/383 (90.34%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 118
MRLKINKACDLSSISVLPP SRR NALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS
Sbjct: 1 MRLKINKACDLSSISVLPPQSRRLNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 60
Query: 119 QSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSKSSTSL 178
Q+SFDE+VTNE QRFSSQDRENSIKKNSFFPPLSYS+EDCQL LSKSSTSL
Sbjct: 61 QNSFDEVVTNE----------QRFSSQDRENSIKKNSFFPPLSYSKEDCQLGLSKSSTSL 120
Query: 179 TQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQISLEVE 238
TQKW+ +PL DSKCQVGEELDRRLG IENSL+KFGKILDSL SDILQLNKGMKQ+SL+VE
Sbjct: 121 TQKWRPSPLTDSKCQVGEELDRRLGTIENSLNKFGKILDSLLSDILQLNKGMKQVSLDVE 180
Query: 239 GIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSALEKQ 298
IWQKM+VNSS LQSMNK+ DD+KA +DGGFKLISDQLKKDA+QE+LHEIS+ LS+LEKQ
Sbjct: 181 SIWQKMLVNSSLLQSMNKDHDDMKAIIDGGFKLISDQLKKDAYQERLHEISDFLSSLEKQ 240
Query: 299 VQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRHRCKI 358
VQASQLKLKNDFISTFT+EMKAM LKKP QKF PHSIQSPE T CLDVP+QKRHRCKI
Sbjct: 241 VQASQLKLKNDFISTFTKEMKAMISTLKKPLQKFPPHSIQSPERTACLDVPKQKRHRCKI 300
Query: 359 QSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYR 418
QSASPNVC ++TAVQ EEVG WKSVKVGK FCTSSVV ++D K IPFSEQC+VLEREYR
Sbjct: 301 QSASPNVCTQATAVQKEEVGMWKSVKVGKAFCTSSVVTRDDPNKVIPFSEQCLVLEREYR 360
Query: 419 VIVDSDEEIERSFSCLIEEKKTG 442
VIVDSDEEIERSFSCLIEEKKTG
Sbjct: 361 VIVDSDEEIERSFSCLIEEKKTG 373
BLAST of Lag0020752 vs. ExPASy TrEMBL
Match:
A0A6J1IAP9 (protein PAIR1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473283 PE=4 SV=1)
HSP 1 Score: 614.0 bits (1582), Expect = 4.9e-172
Identity = 327/384 (85.16%), Postives = 348/384 (90.62%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQHGMYSQLS 118
MRLKINKACDLSSISVLPP S RSNALTTGQQAPQLRSQPSQQSFSQGLSS HG SQ S
Sbjct: 1 MRLKINKACDLSSISVLPPQS-RSNALTTGQQAPQLRSQPSQQSFSQGLSSLHGTNSQFS 60
Query: 119 QSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKKNSFFPPLSYSREDCQLPLSKSSTSL 178
Q+SFDE+VTNE QRFSSQDRENSIKKNSFFPPLSYSRE+CQLPLSKSSTSL
Sbjct: 61 QNSFDEVVTNE----------QRFSSQDRENSIKKNSFFPPLSYSREECQLPLSKSSTSL 120
Query: 179 TQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQISLEVE 238
TQ+WKSTPLPD KCQVGEELDRRLG IENSL+KFGKILDSLH DIL LN+GMKQISL+VE
Sbjct: 121 TQRWKSTPLPDYKCQVGEELDRRLGTIENSLNKFGKILDSLHGDILHLNQGMKQISLDVE 180
Query: 239 GIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSALEKQ 298
GIWQK+IVNSS LQSMNKE DD+KATLDGGFKLISDQLKKDA+Q++LHEIS+VLSALEKQ
Sbjct: 181 GIWQKVIVNSSLLQSMNKEHDDMKATLDGGFKLISDQLKKDAYQDRLHEISDVLSALEKQ 240
Query: 299 VQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRHRCKI 358
VQASQLKLKNDFIS FTQEMKAM C LKK QKF I+SPEST LDVPQQKR RCKI
Sbjct: 241 VQASQLKLKNDFISIFTQEMKAMVCTLKKLLQKFPHRPIESPESTASLDVPQQKRRRCKI 300
Query: 359 QSASPNVCIRSTAVQNEEVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYR 418
QSASP+VCIR+TAVQ EE+GRWKSVKVGKTFCTS+VVKKEDAKK+IPFSEQ +VLEREYR
Sbjct: 301 QSASPDVCIRATAVQTEELGRWKSVKVGKTFCTSTVVKKEDAKKAIPFSEQRLVLEREYR 360
Query: 419 VIVDSDEEIERSFSCLIEEKKTGD 443
VIVDSDEEIERSFSCLIEEKKTG+
Sbjct: 361 VIVDSDEEIERSFSCLIEEKKTGE 373
BLAST of Lag0020752 vs. TAIR 10
Match:
AT1G01690.1 (putative recombination initiation defects 3 )
HSP 1 Score: 230.3 bits (586), Expect = 3.0e-60
Identity = 163/443 (36.79%), Postives = 246/443 (55.53%), Query Frame = 0
Query: 59 MRLKINKACDLSSISVLPPPSRRSNALTTGQQAPQLRSQPSQQSFSQGLSSQH---GMYS 118
M++ INKACDL SISV PP RRS Q + QLRSQ SQQSFSQG SS G +S
Sbjct: 1 MKMNINKACDLKSISVFPPNLRRS---AEPQASQQLRSQQSQQSFSQGPSSSQRGCGGFS 60
Query: 119 QLSQSSFDEIVTNEQVNLGSSLDFQRFSSQDRENSIKK-NSFFPPLSYSREDCQLPLSKS 178
Q++QSS DE++ N+ QRFSSQ+R+ S+KK +S PP+++ RED QL S+S
Sbjct: 61 QMTQSSIDELLIND----------QRFSSQERDLSLKKVSSCLPPINHKREDSQLVASRS 120
Query: 179 STSLTQKWKSTPLPDSKCQVGEELDRRLGIIENSLSKFGKILDSLHSDILQLNKGMKQIS 238
S+ L+++W S + +SK Q+ EEL++R G++E SLS+FG +LDS+ SDI+Q N+G K++
Sbjct: 121 SSGLSRRWSSASIGESKSQISEELEQRFGMMETSLSRFGMMLDSIQSDIMQANRGTKEVF 180
Query: 239 LEVEGIWQKMIVNSSSLQSMNKEQDDIKATLDGGFKLISDQLKKDAHQEKLHEISNVLSA 298
LE E I QK+ + +SLQ + KEQ D KA+LDGG K I ++ KD +QEKL +I +L+
Sbjct: 181 LETERIQQKLTLQDTSLQQLRKEQADSKASLDGGVKFILEEFSKDPNQEKLQKILQMLTT 240
Query: 299 LEKQVQASQLKLKNDFISTFTQEMKAMACNLKKPFQKFSPHSIQSPESTGCLDVPQQKRH 358
+ +QV+ + K++ + TFT+E++ +A +L+ P + + +P+ ++P+Q+
Sbjct: 241 IPEQVETALQKIQREICHTFTREIQVLA-SLRTPEPRVRVPT--APQVKAKENLPEQRGQ 300
Query: 359 RCKIQSA----SPNVCIRSTAVQNE----------------------------------- 418
K+ ++ P V + + E
Sbjct: 301 AAKVLTSLKMPEPRVQVPAAPQAKENFPEQRGPVAKSNSFCNTTLKTKQPQFPRNPNDAS 360
Query: 419 ------------EVGRWKSVKVGKTFCTSSVVKKEDAKKSIPFSEQCMVLEREYRVIVDS 446
+VG WK+VK K S KK +K + SE + V++DS
Sbjct: 361 ARAVKPYLSPKIQVGCWKTVKPEK-----SNFKKRATRKPVK-SESTRTQFEQCSVVIDS 420
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038882642.1 | 8.3e-182 | 88.02 | putative recombination initiation defects 3 isoform X2 [Benincasa hispida] | [more] |
XP_038882627.1 | 2.1e-180 | 87.79 | putative recombination initiation defects 3 isoform X1 [Benincasa hispida] >XP_0... | [more] |
KAG6597127.1 | 4.0e-176 | 85.79 | putative recombination initiation defects 3, partial [Cucurbita argyrosperma sub... | [more] |
XP_022943725.1 | 1.3e-174 | 85.42 | protein PAIR1 isoform X1 [Cucurbita moschata] | [more] |
KAG7028594.1 | 6.4e-174 | 83.17 | Protein PAIR1, partial [Cucurbita argyrosperma subsp. argyrosperma] | [more] |
Match Name | E-value | Identity | Description | |
Q0WWX5 | 4.2e-59 | 36.79 | Putative recombination initiation defects 3 OS=Arabidopsis thaliana OX=3702 GN=P... | [more] |
Q75RY2 | 1.2e-26 | 40.08 | Protein PAIR1 OS=Oryza sativa subsp. japonica OX=39947 GN=PAIR1 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1FY69 | 6.2e-175 | 85.42 | protein PAIR1 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1 | [more] |
A0A6J1FTV4 | 9.0e-174 | 85.42 | protein PAIR1 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111448385 PE=4 SV=1 | [more] |
A0A6J1IBT5 | 3.4e-173 | 85.16 | protein PAIR1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111473283 PE=4 S... | [more] |
A0A1S3AVJ5 | 3.4e-173 | 84.33 | protein PAIR1 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103483272 PE=4 SV=1 | [more] |
A0A6J1IAP9 | 4.9e-172 | 85.16 | protein PAIR1-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111473283 PE=4 S... | [more] |
Match Name | E-value | Identity | Description | |
AT1G01690.1 | 3.0e-60 | 36.79 | putative recombination initiation defects 3 | [more] |