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Lag0020734 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTACTAAGAAGACTATTTGGCTCGCAATCAACCGAGCTTTCTTCTGGTATCTTTGGTGTGAACGAAATGGCAGAATTTTTCAGGGACGTTTCTTTACACTTTAAAGCTTTTATGGATCTAGTTTTATTTAATGCGTTGTATTGGTGTAAATTAAAGCACCCTTTTAGTGACTATAGTCTATCTTCTTTGATCTCAAACTGGATTTCTTTCATGTAATGATTCCTTATGGGAATTTTATTTCCCATTATTTCATTTATCAATGAAATGTCTGTTTCTCTTCCCAAAAAAAACCAACAGTGGTGGCATCAGAGTTTGTTACACAGGCGTGCAGAGGGGCAGTCATTCTTTCCCTTGTCTGGTTTATTTATCGCTGGAAAAGAAATGTGTTATCTCGAGCTTTAGCCTCCCAGACTTTTGCAGGGCTTGATCGGAAATGGTTACTTACACTAGACAAGGTTTCATCTGTTGGCCTTTTTGCAATTGGATTAATGGGTTTGGCCGAGGCATCTGGGGTGGCTGTTCAATCTATGTTAACTGTTGGTGGCATTGGAGGTGAGAGCTTGCTGCCAATTGTCTTTGCAGTTTTAATTATTGATTCCTAGTTTGTGGTCATGTGTGAACTTGGATTTGTTTGTTGGTAGGGTTGAAGATTTAGCATTATTCATTTGTTTCTGTTTTGGTTTTTTTCTTCTTCTTGAAAAAAGAGAACTCTCCTCTTGATAATTAAACATTATTCATGTAGCCACTTTTGTATTGTTGGTAAGTTGAGATATGCTTGAGATAACAATCATGTTCCTTCTTGGCAATGTTATGCTTGCTTGTTGTTAATAATGTGGAACATGTGTAGCATACTTTAAATATCTTTTCCTTTTAAGGAGTGACCATTGCTTTTGCTGCGAGGGATATACGTGGGAATATTTTAAGTGGCTTAAGAATGCGGTTTTCACAACACTTCTCACTTGGAGATACGATTAAGGTGTGTGTAAATCATCTTTTTCTTCTTTTAGTACAACATTCTTCAAATAAAAACATTACTGAAGTTGAGACCTCAATGGTGCTTAGACTTTGTATCTAGATGATCTTTAATTTTCATGCTACATTGTCATACTGTCATACATTATGGTGGAGTATTTTCTCTCTGCATCTTTTTCCCTAGTTGTCTGTTCTCGAACTTGTAATCAAATGAATTGAAATTTTCTATTTGTAGGCTGGTGCTATTGAAGGTAAAGTTGTGGAAATGGGACTCATGACAACATCATTATTAAGTGCTCAACAATTTTCAATCGTTGTTCCAAATTCTCTCCTTTATGGCCAGGTGGATTTTTTTTTTTTTTTTTTTTTTTTAAATCTGTCCTGAATATTTATTATTCTAGGCTTTTATTTTATTCCTATATTATCACTTTACCCTATTGGTCACTTGACATATTGAACTACATGCTTCCCTTGTTTTGATTTTTTAATAAAAGTCGAGCCATGTTTGATTAATGGTCTCCGTAGTTGAAGGATGCATTTGTAGGCAATAATTTGATTAAGTACATTTGTTATCCTGGGAGATTTGAAGGGTTATTGGATTTCTATTTTCAATTAGGGTACAAGTTTGGGTAAAATTGTGATCCTGTAGAAGAGCATGTATGTTATGTTCAAATTCGTTTTTCTGGAAGTCTATATCTGTGCATGTGTTGGCAATACTTTTCTTTTTTTTACTAATTTTGGAATTTTTCAACCAGACTTCTAAATTGAGTTAATTATTCATTTTAAATCTCTATAACTTTTTCTAAAAATATCGCATTTCTAACTCCCTTGAGGAGAAAATTCAAGCAATAATCATGACTCAAGTACTGGTGATTGTTCTTGTCTTTTAACTCTGAAAACTTTCTTGCAATGATATCTTCTATCTTCTATGTTTGAGTCTTGAATTTATGCGGAGATCCGCTTGCTATGCCATGTAGTAACTCAATACTTTCGCATGAATTTCTTAGCTTGATTATGCCCTCGTGGGATTTGCTCATTCAGTCTCATATGCTTCAACCCAATTTTCATGCAGTTATGTGTTGAGGATTGCGTTGAAGTTCTTGGATTAAGATAGTGGTTTAATCAATTTATTTACGGTGTAGTTACTCTAAAATGAGATGATTATATTTGCAGGAAATTATAAATGTGTCGCGGGCACAGTGTCATGCAATCACCAAGGAAATCCGTTTGCAAGTGGATGATCTTAGGATCATTTCTCAGATAACAGATAATATTAAGAGTATGCTAAGATCTCACCCTCAAGCCTTCTTAGGCAAGGAGGCTCCTTATTGCTTTCTCTCTCATGTTGAGAGTAGATATGCAAGGTTGACAATTGGTTGCAACCTTAGAAAGATGGTAAGTTTGACAGTTTTAGTTATCTGTTAATGGCTTATGGTCGTGTTGTAATTTCTCTACGTGTCGTCCTTTCAAACTCTACATTTACATTTCTTAAAATTGTATTTATTTAGGGTGAAGAAGAATTTTTCTCTACCCAGCAAGATATTCTTCTTCAGTCGATAAAGATCATCAAGGAAAATGGTCATGTCAGATTGGACGAACCAGTGATGATGAACAAGAGTGATTTATGCATGAAAGGGACTGAAGAGTAA ATGGTACTAAGAAGACTATTTGGCTCGCAATCAACCGAGCTTTCTTCTGTGGTGGCATCAGAGTTTGTTACACAGGCGTGCAGAGGGGCAGTCATTCTTTCCCTTGTCTGGTTTATTTATCGCTGGAAAAGAAATGTGTTATCTCGAGCTTTAGCCTCCCAGACTTTTGCAGGGCTTGATCGGAAATGGTTACTTACACTAGACAAGGTTTCATCTGTTGGCCTTTTTGCAATTGGATTAATGGGTTTGGCCGAGGCATCTGGGGTGGCTGTTCAATCTATGTTAACTGTTGGTGGCATTGGAGGAGTGACCATTGCTTTTGCTGCGAGGGATATACGTGGGAATATTTTAAGTGGCTTAAGAATGCGGTTTTCACAACACTTCTCACTTGGAGATACGATTAAGGCTGGTGCTATTGAAGGTAAAGTTGTGGAAATGGGACTCATGACAACATCATTATTAAGTGCTCAACAATTTTCAATCGTTGTTCCAAATTCTCTCCTTTATGGCCAGGAAATTATAAATGTGTCGCGGGCACAGTGTCATGCAATCACCAAGGAAATCCGTTTGCAAGTGGATGATCTTAGGATCATTTCTCAGATAACAGATAATATTAAGAGTATGCTAAGATCTCACCCTCAAGCCTTCTTAGGCAAGGAGGCTCCTTATTGCTTTCTCTCTCATGTTGAGAGTAGATATGCAAGGTTGACAATTGGTTGCAACCTTAGAAAGATGGGTGAAGAAGAATTTTTCTCTACCCAGCAAGATATTCTTCTTCAGTCGATAAAGATCATCAAGGAAAATGGTCATGTCAGATTGGACGAACCAGTGATGATGAACAAGAGTGATTTATGCATGAAAGGGACTGAAGAGTAA ATGGTACTAAGAAGACTATTTGGCTCGCAATCAACCGAGCTTTCTTCTGTGGTGGCATCAGAGTTTGTTACACAGGCGTGCAGAGGGGCAGTCATTCTTTCCCTTGTCTGGTTTATTTATCGCTGGAAAAGAAATGTGTTATCTCGAGCTTTAGCCTCCCAGACTTTTGCAGGGCTTGATCGGAAATGGTTACTTACACTAGACAAGGTTTCATCTGTTGGCCTTTTTGCAATTGGATTAATGGGTTTGGCCGAGGCATCTGGGGTGGCTGTTCAATCTATGTTAACTGTTGGTGGCATTGGAGGAGTGACCATTGCTTTTGCTGCGAGGGATATACGTGGGAATATTTTAAGTGGCTTAAGAATGCGGTTTTCACAACACTTCTCACTTGGAGATACGATTAAGGCTGGTGCTATTGAAGGTAAAGTTGTGGAAATGGGACTCATGACAACATCATTATTAAGTGCTCAACAATTTTCAATCGTTGTTCCAAATTCTCTCCTTTATGGCCAGGAAATTATAAATGTGTCGCGGGCACAGTGTCATGCAATCACCAAGGAAATCCGTTTGCAAGTGGATGATCTTAGGATCATTTCTCAGATAACAGATAATATTAAGAGTATGCTAAGATCTCACCCTCAAGCCTTCTTAGGCAAGGAGGCTCCTTATTGCTTTCTCTCTCATGTTGAGAGTAGATATGCAAGGTTGACAATTGGTTGCAACCTTAGAAAGATGGGTGAAGAAGAATTTTTCTCTACCCAGCAAGATATTCTTCTTCAGTCGATAAAGATCATCAAGGAAAATGGTCATGTCAGATTGGACGAACCAGTGATGATGAACAAGAGTGATTTATGCATGAAAGGGACTGAAGAGTAA MVLRRLFGSQSTELSSVVASEFVTQACRGAVILSLVWFIYRWKRNVLSRALASQTFAGLDRKWLLTLDKVSSVGLFAIGLMGLAEASGVAVQSMLTVGGIGGVTIAFAARDIRGNILSGLRMRFSQHFSLGDTIKAGAIEGKVVEMGLMTTSLLSAQQFSIVVPNSLLYGQEIINVSRAQCHAITKEIRLQVDDLRIISQITDNIKSMLRSHPQAFLGKEAPYCFLSHVESRYARLTIGCNLRKMGEEEFFSTQQDILLQSIKIIKENGHVRLDEPVMMNKSDLCMKGTEE Homology
BLAST of Lag0020734 vs. NCBI nr
Match: XP_022147379.1 (mechanosensitive ion channel protein 1, mitochondrial-like [Momordica charantia] >XP_022147381.1 mechanosensitive ion channel protein 1, mitochondrial-like [Momordica charantia] >XP_022147382.1 mechanosensitive ion channel protein 1, mitochondrial-like [Momordica charantia]) HSP 1 Score: 392.1 bits (1006), Expect = 4.1e-105 Identity = 205/254 (80.71%), Postives = 228/254 (89.76%), Query Frame = 0
BLAST of Lag0020734 vs. NCBI nr
Match: XP_022937845.1 (mechanosensitive ion channel protein 1, mitochondrial-like [Cucurbita moschata]) HSP 1 Score: 385.6 bits (989), Expect = 3.9e-103 Identity = 201/254 (79.13%), Postives = 225/254 (88.58%), Query Frame = 0
BLAST of Lag0020734 vs. NCBI nr
Match: KAG7020846.1 (Mechanosensitive ion channel protein 1, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 384.0 bits (985), Expect = 1.1e-102 Identity = 199/254 (78.35%), Postives = 225/254 (88.58%), Query Frame = 0
BLAST of Lag0020734 vs. NCBI nr
Match: KAG6586069.1 (Mechanosensitive ion channel protein 1, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 384.0 bits (985), Expect = 1.1e-102 Identity = 199/254 (78.35%), Postives = 225/254 (88.58%), Query Frame = 0
BLAST of Lag0020734 vs. NCBI nr
Match: XP_022969688.1 (mechanosensitive ion channel protein 1, mitochondrial-like [Cucurbita maxima]) HSP 1 Score: 383.6 bits (984), Expect = 1.5e-102 Identity = 199/254 (78.35%), Postives = 224/254 (88.19%), Query Frame = 0
BLAST of Lag0020734 vs. ExPASy Swiss-Prot
Match: Q8VZL4 (Mechanosensitive ion channel protein 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=MSL1 PE=1 SV=1) HSP 1 Score: 324.7 bits (831), Expect = 1.1e-87 Identity = 160/254 (62.99%), Postives = 213/254 (83.86%), Query Frame = 0
BLAST of Lag0020734 vs. ExPASy Swiss-Prot
Match: P0AEB6 (Low conductance mechanosensitive channel YnaI OS=Escherichia coli O157:H7 OX=83334 GN=ynaI PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.0e-18 Identity = 65/252 (25.79%), Postives = 118/252 (46.83%), Query Frame = 0
BLAST of Lag0020734 vs. ExPASy Swiss-Prot
Match: P0AEB5 (Low conductance mechanosensitive channel YnaI OS=Escherichia coli (strain K12) OX=83333 GN=ynaI PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 3.0e-18 Identity = 65/252 (25.79%), Postives = 118/252 (46.83%), Query Frame = 0
BLAST of Lag0020734 vs. ExPASy Swiss-Prot
Match: O25170 (Uncharacterized MscS family protein HP_0415 OS=Helicobacter pylori (strain ATCC 700392 / 26695) OX=85962 GN=HP_0415 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.2e-15 Identity = 71/274 (25.91%), Postives = 126/274 (45.99%), Query Frame = 0
BLAST of Lag0020734 vs. ExPASy Swiss-Prot
Match: Q9ZKG7 (Uncharacterized MscS family protein jhp_0969 OS=Helicobacter pylori (strain J99 / ATCC 700824) OX=85963 GN=jhp_0969 PE=3 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 1.2e-14 Identity = 71/274 (25.91%), Postives = 126/274 (45.99%), Query Frame = 0
BLAST of Lag0020734 vs. ExPASy TrEMBL
Match: A0A6J1D280 (mechanosensitive ion channel protein 1, mitochondrial-like OS=Momordica charantia OX=3673 GN=LOC111016329 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 2.0e-105 Identity = 205/254 (80.71%), Postives = 228/254 (89.76%), Query Frame = 0
BLAST of Lag0020734 vs. ExPASy TrEMBL
Match: A0A6J1FHY5 (mechanosensitive ion channel protein 1, mitochondrial-like OS=Cucurbita moschata OX=3662 GN=LOC111444110 PE=3 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.9e-103 Identity = 201/254 (79.13%), Postives = 225/254 (88.58%), Query Frame = 0
BLAST of Lag0020734 vs. ExPASy TrEMBL
Match: A0A6J1I1Q4 (mechanosensitive ion channel protein 1, mitochondrial-like OS=Cucurbita maxima OX=3661 GN=LOC111468640 PE=3 SV=1) HSP 1 Score: 383.6 bits (984), Expect = 7.1e-103 Identity = 199/254 (78.35%), Postives = 224/254 (88.19%), Query Frame = 0
BLAST of Lag0020734 vs. ExPASy TrEMBL
Match: A0A0A0L685 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G121740 PE=3 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 1.0e-101 Identity = 199/254 (78.35%), Postives = 221/254 (87.01%), Query Frame = 0
BLAST of Lag0020734 vs. ExPASy TrEMBL
Match: A0A1S3AVZ3 (mechanosensitive ion channel protein 1, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103483257 PE=3 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 7.4e-100 Identity = 195/254 (76.77%), Postives = 217/254 (85.43%), Query Frame = 0
BLAST of Lag0020734 vs. TAIR 10
Match: AT4G00290.1 (Mechanosensitive ion channel protein ) HSP 1 Score: 324.7 bits (831), Expect = 7.5e-89 Identity = 160/254 (62.99%), Postives = 213/254 (83.86%), Query Frame = 0
BLAST of Lag0020734 vs. TAIR 10
Match: AT4G00234.1 (BEST Arabidopsis thaliana protein match is: Mechanosensitive ion channel protein (TAIR:AT4G00290.1); Has 57 Blast hits to 57 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). ) HSP 1 Score: 107.1 bits (266), Expect = 2.5e-23 Identity = 53/83 (63.86%), Postives = 70/83 (84.34%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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