Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATTTGATCGACAAGGCGAAGAACTTCATCGCCGAGAAGGTGGCCGACATGCCCAAGCCCGAGGCCTCCGTCACCAACGTCGATTTCAAGAGCTTGAGCTGCGATTCCGCCGAGTATTTGGCCAATGTCACCGTCTCCAATCCTTACAGCCACTCCATTCCTATCTGCGAGATTTCTTACACTCTCAAAAGCGACGGCAGGTTCCTTTTCGATCTTCCTCTCTGTTTTTTATTTTATAAGTTAGGTCAGATTTTCGATCTATCGATTAGACGATCTCGATCTATTCGATAGGAGAGAAATCTCGTTGATGTTCGTCTTCTGGTGGAATGAAATGCTATTGTTGAGATCGAATGATTAATCGATTAATTTAATTGATGAATGTGCAGAGAGATCGTGACGGGGAAGGTTCCGGATCCAGGATCTCTGAAAGCGAGCGACACGACGATGCTGGAAGTCGGGGTGAAAGTGCCGCACAGCATACTGCTGAGCTTAGCGAGGGACATCGGCCGAGATTGGGACATTGATTACGAGTTGCTAATCGGACTCACCATTGACCTTCCGGTCATCGGAGACTTCACCATTCCTCTCTCCTCAAAAGGCGAGATCAAACTCCCTTCCATCTCTGACTTCTTCGCTTAG
mRNA sequence
ATGGCGGATTTGATCGACAAGGCGAAGAACTTCATCGCCGAGAAGGTGGCCGACATGCCCAAGCCCGAGGCCTCCGTCACCAACGTCGATTTCAAGAGCTTGAGCTGCGATTCCGCCGAGTATTTGGCCAATGTCACCGTCTCCAATCCTTACAGCCACTCCATTCCTATCTGCGAGATTTCTTACACTCTCAAAAGCGACGGCAGAGAGATCGTGACGGGGAAGGTTCCGGATCCAGGATCTCTGAAAGCGAGCGACACGACGATGCTGGAAGTCGGGGTGAAAGTGCCGCACAGCATACTGCTGAGCTTAGCGAGGGACATCGGCCGAGATTGGGACATTGATTACGAGTTGCTAATCGGACTCACCATTGACCTTCCGGTCATCGGAGACTTCACCATTCCTCTCTCCTCAAAAGGCGAGATCAAACTCCCTTCCATCTCTGACTTCTTCGCTTAG
Coding sequence (CDS)
ATGGCGGATTTGATCGACAAGGCGAAGAACTTCATCGCCGAGAAGGTGGCCGACATGCCCAAGCCCGAGGCCTCCGTCACCAACGTCGATTTCAAGAGCTTGAGCTGCGATTCCGCCGAGTATTTGGCCAATGTCACCGTCTCCAATCCTTACAGCCACTCCATTCCTATCTGCGAGATTTCTTACACTCTCAAAAGCGACGGCAGAGAGATCGTGACGGGGAAGGTTCCGGATCCAGGATCTCTGAAAGCGAGCGACACGACGATGCTGGAAGTCGGGGTGAAAGTGCCGCACAGCATACTGCTGAGCTTAGCGAGGGACATCGGCCGAGATTGGGACATTGATTACGAGTTGCTAATCGGACTCACCATTGACCTTCCGGTCATCGGAGACTTCACCATTCCTCTCTCCTCAAAAGGCGAGATCAAACTCCCTTCCATCTCTGACTTCTTCGCTTAG
Protein sequence
MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEISYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLIGLTIDLPVIGDFTIPLSSKGEIKLPSISDFFA
Homology
BLAST of Lag0020713 vs. NCBI nr
Match:
XP_022147435.1 (desiccation protectant protein Lea14 homolog [Momordica charantia])
HSP 1 Score: 264.2 bits (674), Expect = 6.8e-67
Identity = 132/152 (86.84%), Postives = 143/152 (94.08%), Query Frame = 0
Query: 1 MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEI 60
MA LIDKAK F+AEKVA+MPKPEASVT+VDFK LS DSAEYLA VTVSNPYSHSIPICEI
Sbjct: 1 MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60
Query: 61 SYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLI 120
SYTLKSDGR IV+G VPDPGSLKASD+T+LEVGVKVPHSILLSL +DIGRDWDIDYEL I
Sbjct: 61 SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELDI 120
Query: 121 GLTIDLPVIGDFTIPLSSKGEIKLPSISDFFA 153
GLTIDLPV+G+FTIPLS+KGEIKLP+ISDFFA
Sbjct: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFFA 152
BLAST of Lag0020713 vs. NCBI nr
Match:
XP_023526364.1 (desiccation protectant protein Lea14 homolog [Cucurbita pepo subsp. pepo])
HSP 1 Score: 261.5 bits (667), Expect = 4.4e-66
Identity = 129/152 (84.87%), Postives = 140/152 (92.11%), Query Frame = 0
Query: 1 MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEI 60
MADLIDKAKNFIA+KVAD+PKPEASVT+VDFK LSCDS EYLANV+VSNPYS +IPICEI
Sbjct: 1 MADLIDKAKNFIADKVADIPKPEASVTDVDFKRLSCDSVEYLANVSVSNPYSCAIPICEI 60
Query: 61 SYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLI 120
SYTLKSDGR I TG VPDPGSLKASD+TMLEV VKVPH++L+SL RDIGRDWDIDYEL I
Sbjct: 61 SYTLKSDGRVIATGTVPDPGSLKASDSTMLEVAVKVPHTVLISLVRDIGRDWDIDYELQI 120
Query: 121 GLTIDLPVIGDFTIPLSSKGEIKLPSISDFFA 153
GLTIDLPVIG FTIPLSSKGE+KLP+ SD FA
Sbjct: 121 GLTIDLPVIGSFTIPLSSKGEMKLPTFSDMFA 152
BLAST of Lag0020713 vs. NCBI nr
Match:
XP_022979582.1 (desiccation protectant protein Lea14 homolog [Cucurbita maxima])
HSP 1 Score: 261.2 bits (666), Expect = 5.7e-66
Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 0
Query: 1 MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEI 60
MADLIDKAKNF A+KVAD+PKPEASVT+VDFK LSCDS EYLANV+VSNPYS +IPICEI
Sbjct: 1 MADLIDKAKNFFADKVADIPKPEASVTDVDFKRLSCDSVEYLANVSVSNPYSSAIPICEI 60
Query: 61 SYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLI 120
SYTLKSDGR I TG VPDPGSLKASD+TMLEV VKVPH++L+SLARDIGRDWDIDYEL I
Sbjct: 61 SYTLKSDGRVIATGTVPDPGSLKASDSTMLEVAVKVPHTVLISLARDIGRDWDIDYELQI 120
Query: 121 GLTIDLPVIGDFTIPLSSKGEIKLPSISDFFA 153
GLTIDLPVIG FTIPLS+KGE+KLP+ SD FA
Sbjct: 121 GLTIDLPVIGSFTIPLSTKGEMKLPTFSDMFA 152
BLAST of Lag0020713 vs. NCBI nr
Match:
XP_022924605.1 (desiccation protectant protein Lea14 homolog [Cucurbita moschata] >XP_022924606.1 desiccation protectant protein Lea14 homolog [Cucurbita moschata] >KAG6582636.1 hypothetical protein SDJN03_22638, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019031.1 hypothetical protein SDJN02_20908 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 260.4 bits (664), Expect = 9.8e-66
Identity = 128/152 (84.21%), Postives = 140/152 (92.11%), Query Frame = 0
Query: 1 MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEI 60
MADLIDKAKNFIA+KVAD+PKPEASVT+VDFK LSCDS EYLANV+VSNPYS +IPICEI
Sbjct: 1 MADLIDKAKNFIADKVADIPKPEASVTDVDFKRLSCDSVEYLANVSVSNPYSCAIPICEI 60
Query: 61 SYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLI 120
SYTLKSDGR I TG VPDPGSLKASD+TMLEV VKVPH++L+SL RDIGRDWDIDYEL I
Sbjct: 61 SYTLKSDGRVIATGTVPDPGSLKASDSTMLEVAVKVPHTVLISLVRDIGRDWDIDYELQI 120
Query: 121 GLTIDLPVIGDFTIPLSSKGEIKLPSISDFFA 153
GLTIDLPVIG FTIPLS+KGE+KLP+ SD FA
Sbjct: 121 GLTIDLPVIGSFTIPLSTKGEMKLPTFSDMFA 152
BLAST of Lag0020713 vs. NCBI nr
Match:
XP_038876623.1 (LOW QUALITY PROTEIN: desiccation protectant protein Lea14 homolog [Benincasa hispida])
HSP 1 Score: 253.1 bits (645), Expect = 1.6e-63
Identity = 124/152 (81.58%), Postives = 138/152 (90.79%), Query Frame = 0
Query: 1 MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEI 60
MA LID+AKNF+ EKVA++PKPEASVTNVD K +S S EYLANV+VSNPY HSIPICEI
Sbjct: 1 MAGLIDQAKNFVTEKVANIPKPEASVTNVDLKGISFGSVEYLANVSVSNPYGHSIPICEI 60
Query: 61 SYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLI 120
SYTLKS+GR I +G VPDPGSLKASD+TML+VGVKVPHS+L+SLARDIGRDWDIDYEL I
Sbjct: 61 SYTLKSEGRVIASGTVPDPGSLKASDSTMLDVGVKVPHSVLVSLARDIGRDWDIDYELQI 120
Query: 121 GLTIDLPVIGDFTIPLSSKGEIKLPSISDFFA 153
GLTIDLPVIGDFTIPLS+KGEIKLP+ SD FA
Sbjct: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDVFA 152
BLAST of Lag0020713 vs. ExPASy Swiss-Prot
Match:
P46519 (Desiccation protectant protein Lea14 homolog OS=Glycine max OX=3847 PE=2 SV=1)
HSP 1 Score: 236.1 bits (601), Expect = 2.6e-61
Identity = 115/152 (75.66%), Postives = 134/152 (88.16%), Query Frame = 0
Query: 1 MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEI 60
M+ L+DKAKN++AEKV +MPKPEASVT+VDFK +S DS EYLA V+VSNPYS IPICEI
Sbjct: 1 MSQLLDKAKNYVAEKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEI 60
Query: 61 SYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLI 120
Y+LKS G+EI +G +PDPGSLKASDTTML+V VKVPHSILLSLA+DIG DWDIDY+L +
Sbjct: 61 KYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDL 120
Query: 121 GLTIDLPVIGDFTIPLSSKGEIKLPSISDFFA 153
GL IDLPVIG+FTIPLS KGEIKLP++SD FA
Sbjct: 121 GLVIDLPVIGNFTIPLSQKGEIKLPTLSDMFA 152
BLAST of Lag0020713 vs. ExPASy Swiss-Prot
Match:
O03983 (Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana OX=3702 GN=LEA14 PE=1 SV=1)
HSP 1 Score: 220.3 bits (560), Expect = 1.5e-56
Identity = 105/151 (69.54%), Postives = 127/151 (84.11%), Query Frame = 0
Query: 1 MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEI 60
MA L+DKAK+F+A+K+ +PKPE SVT+VD K ++ DS EYLA V+V+NPYSHSIPICEI
Sbjct: 1 MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEI 60
Query: 61 SYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLI 120
S+T S GREI GK+PDPGSLKA D T L++ V VP+SIL +LARD+G DWDIDYEL I
Sbjct: 61 SFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQI 120
Query: 121 GLTIDLPVIGDFTIPLSSKGEIKLPSISDFF 152
GLTIDLPV+G+FTIP+SSKGEIKLP+ DFF
Sbjct: 121 GLTIDLPVVGEFTIPISSKGEIKLPTFKDFF 151
BLAST of Lag0020713 vs. ExPASy Swiss-Prot
Match:
P46518 (Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum OX=3635 GN=LEA14-A PE=2 SV=1)
HSP 1 Score: 215.3 bits (547), Expect = 4.7e-55
Identity = 102/151 (67.55%), Postives = 129/151 (85.43%), Query Frame = 0
Query: 1 MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEI 60
M+ L++KAK+F+ +KVA++ KPEASV++VD K +S + EY A V+VSNPYSHSIPICEI
Sbjct: 1 MSQLLEKAKDFVVDKVANIKKPEASVSDVDLKHVSRECVEYGAKVSVSNPYSHSIPICEI 60
Query: 61 SYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLI 120
SY +S GR I +G +PDPGSLKASDTTML+V VKVP++IL+SL +DIG DWDIDYEL +
Sbjct: 61 SYNFRSAGRGIASGTIPDPGSLKASDTTMLDVPVKVPYNILVSLVKDIGADWDIDYELEL 120
Query: 121 GLTIDLPVIGDFTIPLSSKGEIKLPSISDFF 152
GLTIDLP++G+FTIPLS KGEIKLP++SD F
Sbjct: 121 GLTIDLPIVGNFTIPLSQKGEIKLPTLSDIF 151
BLAST of Lag0020713 vs. ExPASy Swiss-Prot
Match:
P22241 (Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1)
HSP 1 Score: 193.0 bits (489), Expect = 2.5e-48
Identity = 95/151 (62.91%), Postives = 116/151 (76.82%), Query Frame = 0
Query: 1 MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEI 60
MA L++KAKNF+AEKVA++ KP+ASV +VD K + YL + V NPYS SIP+ EI
Sbjct: 1 MAQLMNKAKNFVAEKVANVEKPKASVEDVDLKDVGRHGITYLTRICVENPYSASIPVGEI 60
Query: 61 SYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLI 120
YTLKS GR IV+G +PDPGSLK +D TMLE +KVPHS L+SL +DIG D DIDY L +
Sbjct: 61 KYTLKSAGRVIVSGNIPDPGSLKGNDKTMLEPAIKVPHSALVSLIKDIGADMDIDYVLEL 120
Query: 121 GLTIDLPVIGDFTIPLSSKGEIKLPSISDFF 152
GL +DLPVIG+FTIPLS KGE+KLP +SD F
Sbjct: 121 GLVVDLPVIGNFTIPLSHKGEMKLPGLSDIF 151
BLAST of Lag0020713 vs. ExPASy Swiss-Prot
Match:
O82355 (Desiccation-related protein At2g46140 OS=Arabidopsis thaliana OX=3702 GN=At2g46140 PE=1 SV=1)
HSP 1 Score: 189.5 bits (480), Expect = 2.8e-47
Identity = 91/151 (60.26%), Postives = 119/151 (78.81%), Query Frame = 0
Query: 1 MADLIDKAKNFIAEKVADMPKPEASVTNVDFKSLSCDSAEYLANVTVSNPYSHSIPICEI 60
++ L+DKAK F AEK+A++P PEA+V +VDFK ++ D +Y A V+V NPYS SIPIC+I
Sbjct: 16 ISSLLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQI 75
Query: 61 SYTLKSDGREIVTGKVPDPGSLKASDTTMLEVGVKVPHSILLSLARDIGRDWDIDYELLI 120
SY LKS R I +G +PDPGSL S TT+L+V VKV +SI +SL +D+ DWDIDY+L I
Sbjct: 76 SYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDI 135
Query: 121 GLTIDLPVIGDFTIPLSSKGEIKLPSISDFF 152
GLT D+PV+GD TIP+S++GEIKLPS+ DFF
Sbjct: 136 GLTFDIPVVGDITIPVSTQGEIKLPSLRDFF 166
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022147435.1 | 6.8e-67 | 86.84 | desiccation protectant protein Lea14 homolog [Momordica charantia] | [more] |
XP_023526364.1 | 4.4e-66 | 84.87 | desiccation protectant protein Lea14 homolog [Cucurbita pepo subsp. pepo] | [more] |
XP_022979582.1 | 5.7e-66 | 84.21 | desiccation protectant protein Lea14 homolog [Cucurbita maxima] | [more] |
XP_022924605.1 | 9.8e-66 | 84.21 | desiccation protectant protein Lea14 homolog [Cucurbita moschata] >XP_022924606.... | [more] |
XP_038876623.1 | 1.6e-63 | 81.58 | LOW QUALITY PROTEIN: desiccation protectant protein Lea14 homolog [Benincasa his... | [more] |
Match Name | E-value | Identity | Description | |
P46519 | 2.6e-61 | 75.66 | Desiccation protectant protein Lea14 homolog OS=Glycine max OX=3847 PE=2 SV=1 | [more] |
O03983 | 1.5e-56 | 69.54 | Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana OX=3702 GN=LE... | [more] |
P46518 | 4.7e-55 | 67.55 | Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum OX=3635 GN=LEA... | [more] |
P22241 | 2.5e-48 | 62.91 | Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum OX=4153 PE=2 ... | [more] |
O82355 | 2.8e-47 | 60.26 | Desiccation-related protein At2g46140 OS=Arabidopsis thaliana OX=3702 GN=At2g461... | [more] |