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Lag0020672 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATTTCAAGAAATAAACGGATTCGTTCTGTAGCAGATCTCTTACAAGATCAATTCGGATTGGCTCTAGTTCGTTTAGAAAATATGGTTAGAGGGACTATATGTGGAGCAATTAGACATAAATTGATACCGACTCCACAGAATTTGGTAACTTCAACTCCATTAACAACCACGTTTGAATCTTTTTTCGGATTACACCCATTATCTCAAGTTTTAGATCGAACTAATCCATTGACACAAATAGTTCATGGGAGAAAATTGAGTTATTTGGGCCCAGGAGGATTGACAGGGCGGACTGCTAGTTTTCGAATACGAGATATCCATCCTAGTCATTATGGATTTGATCCAGTTTACAAGATTAATTAATCAAAAGTGTTATATATGGTTTTGTTCTTATTAATATTTAAGAATTGTTAGAACTAGTATACAACAAATGGTTTCATTTATTTTTCATAAAATGAATATTGAGAAAGCTAATGGATAGTGGTTGTTGAAAAAAATAAAGGCTACCAACAAAATGAACAAAGTCAAGCACATGTAGAATTTAAAAAACAAAACAAAGTCATCTGGCAGTTTCAACACGTAAACCTAGTCAAGCTCTTAGGATGATGTGTTGAAAGAGAAGAAAAACTCCTAATCTATGAGTACATGACAAATAAGTAAAGTTTCTCATTAATTTTCATGGAGTAAATTTACTGTGAGAGAGGAAAAGAAAAAAAGAAGCATTTTCGGATAAAGGTATTTTTGAATTTTTTTTTTAAGTTTAAGGGTATTAATGAAACTGAAACTTTAATAGTTTCCATCCAAAAATTAACGACAAGTGTATTTTTTAAACATTTTTTAAAGTTCGGGAGTATTTTTTTAAACTTTTTAAAGTTCAGCTTTTTTAAAACAAATTCCATAGTTCATGGGTATTTTTATATATATATAATTTAGCCTAAAAATAATATATATATATATATATATATATATATATATATATATATATTATTTATTTTGAATATCAAACATCTTATTTGAAAGTCTACGTTCATCTAACTAATTAGAATAGATGGTAAATATTCATTAAAAACATGTGTTTTTTATTATTTACAAAATGAAATTGTGAATTAGTCGCCTATCTTATTCAATTCGTCAAAGATTGTAAATCGAGGATAAGAACAAAAATAATAATTTTCTAAACGAAATGTTCATACACTACAAGTGCAATAATAGGCATTAATAAAAGGTATTGAATATAATAAGAATTTAGGATTGAAAAATGTCGTATGACTTTTAACCAAACTCGACCAAATGAATTAATTTTATTATCATATCCCATAAAAAAAAAAAAAAAAAAAAAAAAAAAGACAACGAAAAAATCAATTTGGCATCGGTAATGGCTCACCTGGTTAACATCATTCTTGAAGTATTAAGATGGTCACAATTTGAAACTAAAAAAATGATGGTCGCCATTTAACATTAGAAATTTCTATTGCTATGATTTTTTTTTTTTTTTTTTTTGATATCCATGAGTGTCCGGACCAGCTTACGCGCACCTCGATTTTCATTGCTATTGTTATAGGTAATTTTGGACCACCATAGGGTACGAGGAGCTGACGAGGACAACCGAGTGGAGATGGGACCAGGAAACGACCTAGAGGAAGACCAAACCAACGATGTAACACCCCATGCCCAGGATTCGGAATTCGGATTTGGCACTAAGGCCCCGACATTCCCCTGCGACCCGGCCACGTTACCATACTTGTCTTAA ATGACCGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATTTCAAGAAATAAACGGATTCGTTCTGTAGCAGATCTCTTACAAGATCAATTCGGATTGGCTCTAGTTCGTTTAGAAAATATGGTTAGAGGGACTATATGTGGAGCAATTAGACATAAATTGATACCGACTCCACAGAATTTGGTAATTTTGGACCACCATAGGGTACGAGGAGCTGACGAGGACAACCGAGTGGAGATGGGACCAGGAAACGACCTAGAGGAAGACCAAACCAACGATGTAACACCCCATGCCCAGGATTCGGAATTCGGATTTGGCACTAAGGCCCCGACATTCCCCTGCGACCCGGCCACGTTACCATACTTGTCTTAA ATGACCGGAACAGGAGGGGATACACGTTACACCACGATTTTGAATCAGAAGAGAGATTTCAAGAAATGGCAGATTTCAAGAAATAAACGGATTCGTTCTGTAGCAGATCTCTTACAAGATCAATTCGGATTGGCTCTAGTTCGTTTAGAAAATATGGTTAGAGGGACTATATGTGGAGCAATTAGACATAAATTGATACCGACTCCACAGAATTTGGTAATTTTGGACCACCATAGGGTACGAGGAGCTGACGAGGACAACCGAGTGGAGATGGGACCAGGAAACGACCTAGAGGAAGACCAAACCAACGATGTAACACCCCATGCCCAGGATTCGGAATTCGGATTTGGCACTAAGGCCCCGACATTCCCCTGCGACCCGGCCACGTTACCATACTTGTCTTAA MTGTGGDTRYTTILNQKRDFKKWQISRNKRIRSVADLLQDQFGLALVRLENMVRGTICGAIRHKLIPTPQNLVILDHHRVRGADEDNRVEMGPGNDLEEDQTNDVTPHAQDSEFGFGTKAPTFPCDPATLPYLS Homology
BLAST of Lag0020672 vs. NCBI nr
Match: YP_010046467.1 (RNA polymerase beta subunit [Lablab purpureus] >QPJ78234.1 RNA polymerase beta subunit [Lablab purpureus] >QRI60673.1 RNA polymerase beta subunit [Lablab purpureus]) HSP 1 Score: 96.7 bits (239), Expect = 1.7e-16 Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of Lag0020672 vs. NCBI nr
Match: YP_009770419.1 (RNA polymerase beta subunit [Guilandina bonduc] >QIT01121.1 RNA polymerase beta subunit [Guilandina bonduc] >QXO89992.1 RNA polymerase beta subunit [Guilandina bonduc]) HSP 1 Score: 95.5 bits (236), Expect = 3.7e-16 Identity = 46/48 (95.83%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of Lag0020672 vs. NCBI nr
Match: QRM91182.1 (RNA polymerase beta subunit [Pueraria montana var. lobata] >QYB23429.1 RNA polymerase beta subunit [Pueraria montana var. lobata]) HSP 1 Score: 95.1 bits (235), Expect = 4.8e-16 Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Lag0020672 vs. NCBI nr
Match: YP_010033428.1 (RNA polymerase beta subunit [Ormosia formosana] >QJE37322.1 RNA polymerase beta subunit [Ormosia boluoensis] >QOW40356.1 RNA polymerase beta subunit [Ormosia formosana]) HSP 1 Score: 95.1 bits (235), Expect = 4.8e-16 Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Lag0020672 vs. NCBI nr
Match: AHM89856.1 (RNA polymerase beta subunit [Lagenaria siceraria]) HSP 1 Score: 95.1 bits (235), Expect = 4.8e-16 Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Lag0020672 vs. ExPASy Swiss-Prot
Match: Q4VZP1 (DNA-directed RNA polymerase subunit beta OS=Cucumis sativus OX=3659 GN=rpoB PE=3 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 6.3e-19 Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Lag0020672 vs. ExPASy Swiss-Prot
Match: A4GGA5 (DNA-directed RNA polymerase subunit beta OS=Phaseolus vulgaris OX=3885 GN=rpoB PE=3 SV=1) HSP 1 Score: 95.1 bits (235), Expect = 6.3e-19 Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Lag0020672 vs. ExPASy Swiss-Prot
Match: Q8HVY5 (DNA-directed RNA polymerase subunit beta OS=Glycine max OX=3847 GN=rpoB PE=3 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 6.3e-19 Identity = 46/47 (97.87%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Lag0020672 vs. ExPASy Swiss-Prot
Match: Q09X25 (DNA-directed RNA polymerase subunit beta OS=Morus indica OX=248361 GN=rpoB PE=3 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.4e-18 Identity = 45/47 (95.74%), Postives = 47/47 (100.00%), Query Frame = 0
BLAST of Lag0020672 vs. ExPASy Swiss-Prot
Match: Q8S8X9 (DNA-directed RNA polymerase subunit beta OS=Atropa belladonna OX=33113 GN=rpoB PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.8e-18 Identity = 45/47 (95.74%), Postives = 47/47 (100.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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