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Lag0020656 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACTGGACAACTTCTTGTAAGTTCACCTTGGTTTTCTGAGGACAGGAGGCTGTACTATTTTTCCCTCTTTTCCCTTTATGGCCGATTATCTGTTTAAAAAATGTTTCTCAGTTAAACAAAAATAAATGTCAAATCCTTTTTTCGGTGGCTTCTATTAATTGTTCTATGATGCTATAGGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCAACACAGGAATTTTTGACTGCATTAAGTGAAGCTGGTGATAGATTAGTTATTGTAGAATTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGGTAACTTTCTTCATCCATGCTTTATATTTCTTCAGATCGTGAAGTTGGCCTGTTTAATTCCATCTTATTGGCGTTTGTTGTTAAATAGTCAGGACCTGCTTTCTTTTCTGAAACTCAATGTAGGACCAGCTTATTGAACAAGTGAGCATTAAATGAATTTGTGTCGTCAGAAACAATGATTGCTGCATTTGTTTAGCTATCAAGATGAAAAGCTTTAAAATACACTTTGCGGTACTTTCAGATGCCTTAAGGTTTTCTACCTATCTATATCAGGTTGTAACTGTAGTCTGTAGACAATTGCTCAATCCTTTAAAAATTTGGTTATAAAGAACTCTGCTGAATATTTTACATCCCAAGTAACTGGTCTCAAGATACTCTGAATATGATCCTGTGATCAGCTTGTTTGAACCTGAAGGGAAGGCTACTACGGCCAAGTTCACTTGTTTACATTACATGTTTGCCACATTGAGTTGAAGAATAACTGAATTTGTTGGGAAGAAAACTGCTCATATGAAGCAACTGGATTAAAGATTTGCGATATAGATTCTTGCATGCCAATTTGATTGGTCCTTTGATGTGGAAGAGAAAGATGTGAATGTCAAATATGTCCAAGATGAGGCATAGTCTTTTGGAAACTGGAGTACCTTGATTGAGGAAGCATGTTTTTTTATTCTTTCCATCATCTGTCGCTGAAGTTGTAATGAGAAAGCTCCTGAACACCTCTTACTTGCACGGTTGTTTCTTGGGAATGCTGCACACATCAAATGATTGATATTCATTGGGTTTGATTTTTGTTGTTTCTAAAAAAGAAAGTGCATCTCTTACCGCCCCCCCAAAAAGTGCATCTAACAGAAAAATCTGACCTTGCACCTTATCAGAATTTTTACTTGCCTATTTTTACGTTCTGATGTTTGATATGTTGAAATGGAACTGTCAGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAACTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGAGCTGACGGACAGTTGGAGTCCTTCTCATGCTCACTCGCAAAGGTTTGCATCCTCCTCCTCCTCCCCATCTCCAATGTAAAGAATTCATTCTGTTTTATGATTTTCGCTTATAATGAGCAGAAAGTATGTTAAATATAAATGACTTTTAGAGTTGTGGACGTGATGTGCTAGAAGGATTGATATGGATCTCAAAAATGGAGTAAAAACTTTCCTTATTCCCATATTTGAATATCTATATTAAGCTGTTGATCTTATGGCTTGCAGTGATATTTTTCTTAGTACTTTCATCAAATGATGATCAATGTAGGAAGGATATATTTTCTAAATTTTAACTCTTATGAAACCTTTCTCCTTCCTGCAGTTTCAGAAAATTAAAGATGCAATTGAATTGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAGGGGTGTAGGAGATCTTATACTGGAGCCTTCCTTGGCTCCTAAAGACAAACAATAA ATGTCAACTGGACAACTTCTTGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCAACACAGGAATTTTTGACTGCATTAAGTGAAGCTGGTGATAGATTAGTTATTGTAGAATTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAACTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGAGCTGACGGACAGTTGGAGTCCTTCTCATGCTCACTCGCAAAGTTTCAGAAAATTAAAGATGCAATTGAATTGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAGGGGTGTAGGAGATCTTATACTGGAGCCTTCCTTGGCTCCTAAAGACAAACAATAA ATGTCAACTGGACAACTTCTTGTACAGGCTGCTGTGGCTGAAAAAGACCAGCCAAAATGGTGGGAAAAGAATGCACCAAACATGATTGATATACATTCAACACAGGAATTTTTGACTGCATTAAGTGAAGCTGGTGATAGATTAGTTATTGTAGAATTTTACGGAACCTGGTGTGCTTCTTGCAGGGCATTATTTCCCCGGCTCTGCAGAACAGCTGATGAACACCCTGAGATTTTATTCCTAAAAGTCAACTTTGATGAAAACAAGCCAATGTGCAAAAGTTTGAATGTCAAGGTCCTTCCTTATTTCCACTTTTATCGTGGAGCTGACGGACAGTTGGAGTCCTTCTCATGCTCACTCGCAAAGTTTCAGAAAATTAAAGATGCAATTGAATTGCACAACACAGCTCGTTGCAGCATTGGGCCGCCAAGGGGTGTAGGAGATCTTATACTGGAGCCTTCCTTGGCTCCTAAAGACAAACAATAA MSTGQLLVQAAVAEKDQPKWWEKNAPNMIDIHSTQEFLTALSEAGDRLVIVEFYGTWCASCRALFPRLCRTADEHPEILFLKVNFDENKPMCKSLNVKVLPYFHFYRGADGQLESFSCSLAKFQKIKDAIELHNTARCSIGPPRGVGDLILEPSLAPKDKQ Homology
BLAST of Lag0020656 vs. NCBI nr
Match: KAA0048892.1 (thioredoxin-like 2 [Cucumis melo var. makuwa] >TYK20842.1 thioredoxin-like 2 [Cucumis melo var. makuwa]) HSP 1 Score: 327.4 bits (838), Expect = 6.9e-86 Identity = 153/157 (97.45%), Postives = 155/157 (98.73%), Query Frame = 0
BLAST of Lag0020656 vs. NCBI nr
Match: XP_008437900.1 (PREDICTED: thioredoxin-like 2, chloroplastic [Cucumis melo]) HSP 1 Score: 327.0 bits (837), Expect = 9.0e-86 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Lag0020656 vs. NCBI nr
Match: XP_004133814.1 (thioredoxin-like 2, chloroplastic [Cucumis sativus] >KGN56427.1 hypothetical protein Csa_010811 [Cucumis sativus]) HSP 1 Score: 327.0 bits (837), Expect = 9.0e-86 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Lag0020656 vs. NCBI nr
Match: XP_038877589.1 (thioredoxin-like 2, chloroplastic [Benincasa hispida]) HSP 1 Score: 327.0 bits (837), Expect = 9.0e-86 Identity = 152/154 (98.70%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Lag0020656 vs. NCBI nr
Match: XP_022147515.1 (thioredoxin-like 2, chloroplastic [Momordica charantia]) HSP 1 Score: 319.7 bits (818), Expect = 1.4e-83 Identity = 151/155 (97.42%), Postives = 153/155 (98.71%), Query Frame = 0
BLAST of Lag0020656 vs. ExPASy Swiss-Prot
Match: Q5TKD8 (Thioredoxin-like 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0200100 PE=2 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 6.5e-71 Identity = 126/157 (80.25%), Postives = 139/157 (88.54%), Query Frame = 0
BLAST of Lag0020656 vs. ExPASy Swiss-Prot
Match: Q8LEK4 (Thioredoxin-like 2-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g26160 PE=1 SV=2) HSP 1 Score: 224.6 bits (571), Expect = 8.3e-58 Identity = 101/133 (75.94%), Postives = 115/133 (86.47%), Query Frame = 0
BLAST of Lag0020656 vs. ExPASy Swiss-Prot
Match: Q8LCT3 (Thioredoxin-like 2-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g29670 PE=2 SV=2) HSP 1 Score: 219.2 bits (557), Expect = 3.5e-56 Identity = 97/118 (82.20%), Postives = 110/118 (93.22%), Query Frame = 0
BLAST of Lag0020656 vs. ExPASy Swiss-Prot
Match: Q10M18 (Thioredoxin-like 1-2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0326500 PE=2 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.3e-39 Identity = 75/155 (48.39%), Postives = 106/155 (68.39%), Query Frame = 0
BLAST of Lag0020656 vs. ExPASy Swiss-Prot
Match: O22779 (Thioredoxin-like 1-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g33270 PE=2 SV=1) HSP 1 Score: 151.4 bits (381), Expect = 8.9e-36 Identity = 64/142 (45.07%), Postives = 100/142 (70.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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