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Lag0020655 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGAATCTAAATCAGACGGATCGCTTCTCCCTCTTTCTCCCGGTACTCTCCTCTCATCTTAATTTCGTTGTTTCATCTTCTTCCTCGCTTGTTTCCATTCCATCTCCTGTTTGTTCTTTAAATTTTGTTGTAATATTGTGTTTCCGTATTTCTGTGTTTGATATCTTCATTCCCATGATGATTTTGCTTCGAGTTTACATTTCCTCGGGATTCTCGTTCATTCTGTTTTACGCGATCGATTTCCATCTGCTTTTTCTATACGAGTTTCTTCGAATCGATAGGCTTGTTGCTAGTGGATTGAGAATTAAAATCACCCAATTCCATTTTTACAGAAAATGTGCAGATGATTGATAGATCGCCTCCCCATCACCATGAGACTCATGGAAGGCGTAATGACATTGACGAGAACACCTCTTTGGATGAAGTCAGAGCGCCAAACGTTTTTGAGAGAGTAAAAGAGGAGATTGAGGCGCTTGTTGAAACGATTCTCCCAAAGAAAGAGCCAGAAATGTATGAAAGAAATTTTTTTTTTTTTTTTTTTTTTTTAATGCAGTTATTATGCAACTACAAACATGTAGTTGGTATATATATTGATATATATTGATATCTGATTCATATTTTACCCAAAATGCAATTAGTCAGTTTTGTGGTTGTATTGTGCGTTTGTTTGAACTAGATTTCAATGTTTAGTGCTACGTTTCGGCTTTCTTTTGTTACTTGATTTAACGCTTGGATTTAGGAGTTTAAGTGGCTGAGTTTGTGTGTTTGTGTCTTCTTTCGGGATTTTAGGTGTTTTGGCGTTGAATTTTAAACGATTCATTGATTGGTTTTGGGGCCAACTTTTTGTTTGGTTTTGAAGATAGTATACTTATTCAAGTTCAGATTTCAATTCAATGAAATTAAAATGACCTTTCGCTATATACATATATAAAAGCCCTGTGTTGTTTTCTGATCGCAGGGATGAAACTGTAGCAACAGAGTCCAAAGAAGAGAAAACAGAGTCTCAATCAGGTGGTTCCCTTGTCTTTTCATATTAGAATTTGCAAATTCTCTCTCCCCTCTTTGTAAATTAGCCTATCTTGTTCAACTTTTCTCAAGTGGTAAAAGATGTGGACAATATGGTAGATTGATGTGTAAAGCTGGCCTCTAGGACAGAAGTAAAACTTGTTATGTCGAAATAATTATGGAGTTTATTTTCTTCTTGTTTGTATGGATCAGATAGTACATTGAAAGCAGCGAAAGTGTTTGAAAAAGCGAAGGATGAGATCGAGAAGATGTTGCACATCAATCAATCGAAAGAAACCCATGGCCAGCATGATGATATAGGAGAGGATACCCAATTAAATGAAGTCAAAGCTCCAAATTTATTCGAGCGGGCAGCAGAAGAATACGAGGCTTTTATGCAAACTGTTCATTCCAAGAAAGAATCTGAAACATGGGATAAGAGGTCTCGATTTACTTGTTTTTAAGTAGTTTAGGTTGAGCAGTAATGAGACAAATTTATTTCTATTTCTAACTTGTTTAATTTCCTGCAATTCTTTTGAAGGGATGAAACAGCCAATGCTGCATCAATGCAGAAGGAAGCGATGACTCTCTCAGGTAACACAGCTCTCAAATTTGCATTCACATCACAGAGTTCTCCACACACGCTCTACTATAACTTTTGACCTTAGTACTCTGGTTTACATTTCAACCTCCTGAAGTTTGCTTTTGATTGGCTTCTTATTAAATGGCCACTGACACACATGTATGAAAGCTCATTCGACAAGAAAAACTAAGTTGCAGCTATTTTGCTTCTAACGAGTTTTTTTTTTTTTTTTTTTTTTTGGTGGAAAATGATGCAGAAATTATTTCGAACGAGAAAATGCCAAACAATGAAGTGAAAGGGCCAAATGTTTTTGGGAGAGCAAAAGATGAAATGGAAGCACTTGTTCATACCATCCATCAGAAGAAGGAAACTGATTCACCAGCGAAAGAAGGATTTCTTTCAAAACTTGGAAAATGTTTGGAAATAATATGCTCTCCATCAAAAGAGAAGGATGATTGA ATGGCCGAATCTAAATCAGACGGATCGCTTCTCCCTCTTTCTCCCGAAAATGTGCAGATGATTGATAGATCGCCTCCCCATCACCATGAGACTCATGGAAGGCGTAATGACATTGACGAGAACACCTCTTTGGATGAAGTCAGAGCGCCAAACGTTTTTGAGAGAGTAAAAGAGGAGATTGAGGCGCTTGTTGAAACGATTCTCCCAAAGAAAGAGCCAGAAATGGATGAAACTGTAGCAACAGAGTCCAAAGAAGAGAAAACAGAGTCTCAATCAGATAGTACATTGAAAGCAGCGAAAGTGTTTGAAAAAGCGAAGGATGAGATCGAGAAGATGTTGCACATCAATCAATCGAAAGAAACCCATGGCCAGCATGATGATATAGGAGAGGATACCCAATTAAATGAAGTCAAAGCTCCAAATTTATTCGAGCGGGCAGCAGAAGAATACGAGGCTTTTATGCAAACTGTTCATTCCAAGAAAGAATCTGAAACATGGGATAAGAGGGATGAAACAGCCAATGCTGCATCAATGCAGAAGGAAGCGATGACTCTCTCAGAAATTATTTCGAACGAGAAAATGCCAAACAATGAAGTGAAAGGGCCAAATGTTTTTGGGAGAGCAAAAGATGAAATGGAAGCACTTGTTCATACCATCCATCAGAAGAAGGAAACTGATTCACCAGCGAAAGAAGGATTTCTTTCAAAACTTGGAAAATGTTTGGAAATAATATGCTCTCCATCAAAAGAGAAGGATGATTGA ATGGCCGAATCTAAATCAGACGGATCGCTTCTCCCTCTTTCTCCCGAAAATGTGCAGATGATTGATAGATCGCCTCCCCATCACCATGAGACTCATGGAAGGCGTAATGACATTGACGAGAACACCTCTTTGGATGAAGTCAGAGCGCCAAACGTTTTTGAGAGAGTAAAAGAGGAGATTGAGGCGCTTGTTGAAACGATTCTCCCAAAGAAAGAGCCAGAAATGGATGAAACTGTAGCAACAGAGTCCAAAGAAGAGAAAACAGAGTCTCAATCAGATAGTACATTGAAAGCAGCGAAAGTGTTTGAAAAAGCGAAGGATGAGATCGAGAAGATGTTGCACATCAATCAATCGAAAGAAACCCATGGCCAGCATGATGATATAGGAGAGGATACCCAATTAAATGAAGTCAAAGCTCCAAATTTATTCGAGCGGGCAGCAGAAGAATACGAGGCTTTTATGCAAACTGTTCATTCCAAGAAAGAATCTGAAACATGGGATAAGAGGGATGAAACAGCCAATGCTGCATCAATGCAGAAGGAAGCGATGACTCTCTCAGAAATTATTTCGAACGAGAAAATGCCAAACAATGAAGTGAAAGGGCCAAATGTTTTTGGGAGAGCAAAAGATGAAATGGAAGCACTTGTTCATACCATCCATCAGAAGAAGGAAACTGATTCACCAGCGAAAGAAGGATTTCTTTCAAAACTTGGAAAATGTTTGGAAATAATATGCTCTCCATCAAAAGAGAAGGATGATTGA MAESKSDGSLLPLSPENVQMIDRSPPHHHETHGRRNDIDENTSLDEVRAPNVFERVKEEIEALVETILPKKEPEMDETVATESKEEKTESQSDSTLKAAKVFEKAKDEIEKMLHINQSKETHGQHDDIGEDTQLNEVKAPNLFERAAEEYEAFMQTVHSKKESETWDKRDETANAASMQKEAMTLSEIISNEKMPNNEVKGPNVFGRAKDEMEALVHTIHQKKETDSPAKEGFLSKLGKCLEIICSPSKEKDD Homology
BLAST of Lag0020655 vs. NCBI nr
Match: XP_022147451.1 (uncharacterized protein LOC111016373 isoform X2 [Momordica charantia]) HSP 1 Score: 352.1 bits (902), Expect = 4.1e-93 Identity = 200/271 (73.80%), Postives = 218/271 (80.44%), Query Frame = 0
BLAST of Lag0020655 vs. NCBI nr
Match: XP_038878081.1 (uncharacterized protein LOC120070259 [Benincasa hispida]) HSP 1 Score: 351.7 bits (901), Expect = 5.4e-93 Identity = 199/253 (78.66%), Postives = 217/253 (85.77%), Query Frame = 0
BLAST of Lag0020655 vs. NCBI nr
Match: XP_022147450.1 (uncharacterized protein LOC111016373 isoform X1 [Momordica charantia]) HSP 1 Score: 340.1 bits (871), Expect = 1.6e-89 Identity = 200/291 (68.73%), Postives = 218/291 (74.91%), Query Frame = 0
BLAST of Lag0020655 vs. NCBI nr
Match: XP_022974949.1 (uncharacterized protein LOC111473773 [Cucurbita maxima] >XP_022975453.1 uncharacterized protein LOC111474799 [Cucurbita maxima]) HSP 1 Score: 337.0 bits (863), Expect = 1.4e-88 Identity = 188/253 (74.31%), Postives = 206/253 (81.42%), Query Frame = 0
BLAST of Lag0020655 vs. NCBI nr
Match: KAG7028547.1 (hypothetical protein SDJN02_09728, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 336.7 bits (862), Expect = 1.8e-88 Identity = 187/253 (73.91%), Postives = 205/253 (81.03%), Query Frame = 0
BLAST of Lag0020655 vs. ExPASy TrEMBL
Match: A0A6J1D2E5 (uncharacterized protein LOC111016373 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111016373 PE=4 SV=1) HSP 1 Score: 352.1 bits (902), Expect = 2.0e-93 Identity = 200/271 (73.80%), Postives = 218/271 (80.44%), Query Frame = 0
BLAST of Lag0020655 vs. ExPASy TrEMBL
Match: A0A6J1D074 (uncharacterized protein LOC111016373 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111016373 PE=4 SV=1) HSP 1 Score: 340.1 bits (871), Expect = 7.8e-90 Identity = 200/291 (68.73%), Postives = 218/291 (74.91%), Query Frame = 0
BLAST of Lag0020655 vs. ExPASy TrEMBL
Match: A0A6J1IJ85 (uncharacterized protein LOC111473773 OS=Cucurbita maxima OX=3661 GN=LOC111474799 PE=4 SV=1) HSP 1 Score: 337.0 bits (863), Expect = 6.6e-89 Identity = 188/253 (74.31%), Postives = 206/253 (81.42%), Query Frame = 0
BLAST of Lag0020655 vs. ExPASy TrEMBL
Match: A0A1S3AVP2 (uncharacterized protein LOC103483189 OS=Cucumis melo OX=3656 GN=LOC103483189 PE=4 SV=1) HSP 1 Score: 335.1 bits (858), Expect = 2.5e-88 Identity = 191/253 (75.49%), Postives = 212/253 (83.79%), Query Frame = 0
BLAST of Lag0020655 vs. ExPASy TrEMBL
Match: A0A0A0L8K5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119590 PE=4 SV=1) HSP 1 Score: 330.9 bits (847), Expect = 4.8e-87 Identity = 192/253 (75.89%), Postives = 208/253 (82.21%), Query Frame = 0
BLAST of Lag0020655 vs. TAIR 10
Match: AT5G57000.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 141 Blast hits to 104 proteins in 24 species: Archae - 0; Bacteria - 6; Metazoa - 27; Fungi - 8; Plants - 82; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink). ) HSP 1 Score: 77.4 bits (189), Expect = 1.8e-14 Identity = 58/158 (36.71%), Postives = 92/158 (58.23%), Query Frame = 0
BLAST of Lag0020655 vs. TAIR 10
Match: AT5G57000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 153 Blast hits to 116 proteins in 29 species: Archae - 0; Bacteria - 6; Metazoa - 33; Fungi - 7; Plants - 82; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). ) HSP 1 Score: 76.6 bits (187), Expect = 3.1e-14 Identity = 55/156 (35.26%), Postives = 91/156 (58.33%), Query Frame = 0
BLAST of Lag0020655 vs. TAIR 10
Match: AT1G72690.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17490.1); Has 59 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.0 bits (136), Expect = 2.6e-08 Identity = 34/78 (43.59%), Postives = 45/78 (57.69%), Query Frame = 0
BLAST of Lag0020655 vs. TAIR 10
Match: AT1G17490.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G72690.1); Has 57 Blast hits to 45 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.9 bits (115), Expect = 6.9e-06 Identity = 23/48 (47.92%), Postives = 32/48 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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