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Lag0020626 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCTCTCTCTCTCTCTCAAGTCTCAAGCTTTCCCATTTCTCAGTTCTTGCCTCCTGCAAATCTTCCTCTCTTCAGGTATGACTTATTACTCGAGAACTTGAAGTCGATGAACAGTTACATTTCAATCTCTGTCATGAACAGATCAGTATGCTTTTGTCTATAGCTTCACGTTTCAACTTGTTTATTTTTAGAGATCTGCAGTCTCAACAGACTCCAGCACCTAGACTTTGAACCGACTATGTTTGCATCTTCAACATAACTCAAATCCACCAGCCCTCTGGACCGCTCGAATTAACAAACGACCGAGACATGATCCAGCCCCGACCCTAGTGAGCCAGAAGCATCTCCTTCTTCCCTCTCACTTTTTATCAACAAACAATGCTTATTCAGATTCAGAAAGAAGTCTGTCCAGTAGAATCTCTGTTATTTCTTCCTTGAAAGTTGTGATATAAGCAATGATAGTAAAATCCATAGAGGATGCTTTCCTTTAATTGTTCTTTAAATATGATTGCTTTCTTGTTACCATTCATTCAGAATCGCTTCATCTTCTCCTTGAATTCTTCATCATTTTCAGCCTTACGCCTTCTCTTACAGAGATCTTCACTGGTTCCAACTTCCAACTATAAATTGTTGCAGAGACAGAGCTTCCATTATCACTGTCTTCTCAATCTCAAACTTTCTATTTCTCTGTTCATAATGGCCAATCTTCCTCGCTTTGGTCGGGCATGGCAACGTATTTCCGCCCCCCGCCCTGCTCCGGCCGCCGCACAGCCTGCTTCAGAACCAGAGCCTGAGATTCTGCCCTTAGCTCCGACCACCCAATCTCTGCAACCTTTCGAACCCAACCCGCCGCCTGTGGCTGCTTGGATTTCCTCTCCGGCGAAGAAAGCGCTCTCACCCGCCGTATCGCCGAAATATAATGCTACCGTCACACGTGTGGCCAGCCCGCCGGTCTCCCCTTCACGAAAATCTCCCGATCGGAGACATTCAATTAGCCCTAATTCGTATCAGAAAACCGTCAAGCCAACTACTCCACCACTTTCCCCTCTGGCTCTGCCGAAATCTGCGAATGTGACGGCGATTCAATCCAAAATCCTGCCGGAGGTGGAGAAGAAAATCGGTCCGTACAAGAAGCCCGTCGAGAAGGTGGATCGGCAGACGGAGTACGGCTCCGGTAAGCCGCCGCAGAAGGCGGAGGCTATAAACCTCGCCGGACATAACGTCGGCGCGGTCATGGAAGTAAAACAATTCTCCGATAAACGAGGCGGAGAAGTCATCAGGAAGATCGAAACAGAAAGCGACGTAACGGCGGGGGCAAAGGAGAAAGGTGACAGAGCAACCGGATTTCCGATGACGCCATACATGAACAGCAATTTTCAAGAAGTGAACAATTCTGTAATGTATAATTCGTCGTGCAGTGGCCGTGATCCAGGGCTGCACCTTGATTTCTCCGGCGAGTCGAAGGATGATGGAGCCATTGTCGACGGCGGCGAGAAATCTAAGTATTAA ATGCTCTCTCTCTCTCTCTCAAGTCTCAAGCTTTCCCATTTCTCAGTTCTTGCCTCCTGCAAATCTTCCTCTCTTCAGAATCGCTTCATCTTCTCCTTGAATTCTTCATCATTTTCAGCCTTACGCCTTCTCTTACAGAGATCTTCACTGGTTCCAACTTCCAACTATAAATTGTTGCAGAGACAGAGCTTCCATTATCACTGTCTTCTCAATCTCAAACTTTCTATTTCTCTGTTCATAATGGCCAATCTTCCTCGCTTTGGTCGGGCATGGCAACGTATTTCCGCCCCCCGCCCTGCTCCGGCCGCCGCACAGCCTGCTTCAGAACCAGAGCCTGAGATTCTGCCCTTAGCTCCGACCACCCAATCTCTGCAACCTTTCGAACCCAACCCGCCGCCTGTGGCTGCTTGGATTTCCTCTCCGGCGAAGAAAGCGCTCTCACCCGCCGTATCGCCGAAATATAATGCTACCGTCACACGTGTGGCCAGCCCGCCGGTCTCCCCTTCACGAAAATCTCCCGATCGGAGACATTCAATTAGCCCTAATTCGTATCAGAAAACCGTCAAGCCAACTACTCCACCACTTTCCCCTCTGGCTCTGCCGAAATCTGCGAATGTGACGGCGATTCAATCCAAAATCCTGCCGGAGGTGGAGAAGAAAATCGGTCCGTACAAGAAGCCCGTCGAGAAGGTGGATCGGCAGACGGAGTACGGCTCCGGTAAGCCGCCGCAGAAGGCGGAGGCTATAAACCTCGCCGGACATAACGTCGGCGCGGTCATGGAAGTAAAACAATTCTCCGATAAACGAGGCGGAGAAGTCATCAGGAAGATCGAAACAGAAAGCGACGTAACGGCGGGGGCAAAGGAGAAAGGTGACAGAGCAACCGGATTTCCGATGACGCCATACATGAACAGCAATTTTCAAGAAGTGAACAATTCTGTAATGTATAATTCGTCGTGCAGTGGCCGTGATCCAGGGCTGCACCTTGATTTCTCCGGCGAGTCGAAGGATGATGGAGCCATTGTCGACGGCGGCGAGAAATCTAAGTATTAA ATGCTCTCTCTCTCTCTCTCAAGTCTCAAGCTTTCCCATTTCTCAGTTCTTGCCTCCTGCAAATCTTCCTCTCTTCAGAATCGCTTCATCTTCTCCTTGAATTCTTCATCATTTTCAGCCTTACGCCTTCTCTTACAGAGATCTTCACTGGTTCCAACTTCCAACTATAAATTGTTGCAGAGACAGAGCTTCCATTATCACTGTCTTCTCAATCTCAAACTTTCTATTTCTCTGTTCATAATGGCCAATCTTCCTCGCTTTGGTCGGGCATGGCAACGTATTTCCGCCCCCCGCCCTGCTCCGGCCGCCGCACAGCCTGCTTCAGAACCAGAGCCTGAGATTCTGCCCTTAGCTCCGACCACCCAATCTCTGCAACCTTTCGAACCCAACCCGCCGCCTGTGGCTGCTTGGATTTCCTCTCCGGCGAAGAAAGCGCTCTCACCCGCCGTATCGCCGAAATATAATGCTACCGTCACACGTGTGGCCAGCCCGCCGGTCTCCCCTTCACGAAAATCTCCCGATCGGAGACATTCAATTAGCCCTAATTCGTATCAGAAAACCGTCAAGCCAACTACTCCACCACTTTCCCCTCTGGCTCTGCCGAAATCTGCGAATGTGACGGCGATTCAATCCAAAATCCTGCCGGAGGTGGAGAAGAAAATCGGTCCGTACAAGAAGCCCGTCGAGAAGGTGGATCGGCAGACGGAGTACGGCTCCGGTAAGCCGCCGCAGAAGGCGGAGGCTATAAACCTCGCCGGACATAACGTCGGCGCGGTCATGGAAGTAAAACAATTCTCCGATAAACGAGGCGGAGAAGTCATCAGGAAGATCGAAACAGAAAGCGACGTAACGGCGGGGGCAAAGGAGAAAGGTGACAGAGCAACCGGATTTCCGATGACGCCATACATGAACAGCAATTTTCAAGAAGTGAACAATTCTGTAATGTATAATTCGTCGTGCAGTGGCCGTGATCCAGGGCTGCACCTTGATTTCTCCGGCGAGTCGAAGGATGATGGAGCCATTGTCGACGGCGGCGAGAAATCTAAGTATTAA MLSLSLSSLKLSHFSVLASCKSSSLQNRFIFSLNSSSFSALRLLLQRSSLVPTSNYKLLQRQSFHYHCLLNLKLSISLFIMANLPRFGRAWQRISAPRPAPAAAQPASEPEPEILPLAPTTQSLQPFEPNPPPVAAWISSPAKKALSPAVSPKYNATVTRVASPPVSPSRKSPDRRHSISPNSYQKTVKPTTPPLSPLALPKSANVTAIQSKILPEVEKKIGPYKKPVEKVDRQTEYGSGKPPQKAEAINLAGHNVGAVMEVKQFSDKRGGEVIRKIETESDVTAGAKEKGDRATGFPMTPYMNSNFQEVNNSVMYNSSCSGRDPGLHLDFSGESKDDGAIVDGGEKSKY Homology
BLAST of Lag0020626 vs. NCBI nr
Match: XP_011650663.1 (gibberellin-regulated protein 14 [Cucumis sativus] >KGN56396.1 hypothetical protein Csa_011358 [Cucumis sativus]) HSP 1 Score: 289.3 bits (739), Expect = 4.5e-74 Identity = 177/286 (61.89%), Postives = 199/286 (69.58%), Query Frame = 0
BLAST of Lag0020626 vs. NCBI nr
Match: KAA0048864.1 (WW domain-binding protein 11-like [Cucumis melo var. makuwa] >TYK20816.1 WW domain-binding protein 11-like [Cucumis melo var. makuwa]) HSP 1 Score: 280.4 bits (716), Expect = 2.1e-71 Identity = 175/283 (61.84%), Postives = 201/283 (71.02%), Query Frame = 0
BLAST of Lag0020626 vs. NCBI nr
Match: XP_022147458.1 (vegetative cell wall protein gp1-like [Momordica charantia]) HSP 1 Score: 218.8 bits (556), Expect = 7.5e-53 Identity = 153/292 (52.40%), Postives = 182/292 (62.33%), Query Frame = 0
BLAST of Lag0020626 vs. NCBI nr
Match: XP_008437853.1 (PREDICTED: WW domain-binding protein 11-like [Cucumis melo]) HSP 1 Score: 213.4 bits (542), Expect = 3.2e-51 Identity = 133/225 (59.11%), Postives = 155/225 (68.89%), Query Frame = 0
BLAST of Lag0020626 vs. NCBI nr
Match: KAG7028529.1 (hypothetical protein SDJN02_09710 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 188.0 bits (476), Expect = 1.4e-43 Identity = 141/304 (46.38%), Postives = 172/304 (56.58%), Query Frame = 0
BLAST of Lag0020626 vs. ExPASy TrEMBL
Match: A0A0A0L8G8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G119310 PE=4 SV=1) HSP 1 Score: 289.3 bits (739), Expect = 2.2e-74 Identity = 177/286 (61.89%), Postives = 199/286 (69.58%), Query Frame = 0
BLAST of Lag0020626 vs. ExPASy TrEMBL
Match: A0A5D3DB96 (WW domain-binding protein 11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00770 PE=4 SV=1) HSP 1 Score: 280.4 bits (716), Expect = 1.0e-71 Identity = 175/283 (61.84%), Postives = 201/283 (71.02%), Query Frame = 0
BLAST of Lag0020626 vs. ExPASy TrEMBL
Match: A0A6J1D1D2 (vegetative cell wall protein gp1-like OS=Momordica charantia OX=3673 GN=LOC111016378 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 3.6e-53 Identity = 153/292 (52.40%), Postives = 182/292 (62.33%), Query Frame = 0
BLAST of Lag0020626 vs. ExPASy TrEMBL
Match: A0A1S3AVL7 (WW domain-binding protein 11-like OS=Cucumis melo OX=3656 GN=LOC103483160 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 1.5e-51 Identity = 133/225 (59.11%), Postives = 155/225 (68.89%), Query Frame = 0
BLAST of Lag0020626 vs. ExPASy TrEMBL
Match: A0A6J1GHE5 (sulfated surface glycoprotein 185-like OS=Cucurbita moschata OX=3662 GN=LOC111454206 PE=4 SV=1) HSP 1 Score: 186.4 bits (472), Expect = 2.0e-43 Identity = 139/301 (46.18%), Postives = 171/301 (56.81%), Query Frame = 0
BLAST of Lag0020626 vs. TAIR 10
Match: AT1G63310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G20362.1); Has 78 Blast hits to 77 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 78; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 52.4 bits (124), Expect = 8.7e-07 Identity = 33/87 (37.93%), Postives = 46/87 (52.87%), Query Frame = 0
BLAST of Lag0020626 vs. TAIR 10
Match: AT2G46630.1 (unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 110095 Blast hits to 59224 proteins in 2216 species: Archae - 177; Bacteria - 15429; Metazoa - 38345; Fungi - 18843; Plants - 13341; Viruses - 3084; Other Eukaryotes - 20876 (source: NCBI BLink). ) HSP 1 Score: 51.6 bits (122), Expect = 1.5e-06 Identity = 83/350 (23.71%), Postives = 121/350 (34.57%), Query Frame = 0
BLAST of Lag0020626 vs. TAIR 10
Match: AT1G75260.1 (oxidoreductases, acting on NADH or NADPH ) HSP 1 Score: 45.1 bits (105), Expect = 1.4e-04 Identity = 49/178 (27.53%), Postives = 77/178 (43.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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