![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lag0020613 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAACTAAGGTATTCTTAGGAACTAAAAAAAAAAAAAACAAAAAAAAGGTATTCTTAGGTTATTTGATCAATTTATTGAGATATTACTTGTGGTGTGTACATATATAATAAAAAATTTTAAAAAATTAAATGGATTCAACTCTATATTCGAAGTCATGCCATCCATCCAAAATTATCATTATTTTAAAAGTTATGAGACAAAAATAAATTTATGGACTCAAATGGTATTTAAACCATATAATAGTAGTTTTATTTTGTTTTGTATTCAATAAATCTTAAACTAAATTTACTAAACATACATACTCTAACATCAATTAAGAGAGAGAATAATATTTTTTTAACATAGAAGTAGGAATCGAGCTTCCAACCTTGAGAAAATAGACATCTTAACCACATAATTATGCTAATAAAAATCTTTAATAAAATATATTTCCTTTGATATAAAATCTTTTTGATAAACTTGAAAAGGTAAAACTAAGTGCTGATATATATATATATACAACTACAAGAGTGAAATGGATATTGCCATGGAGATTCAAACAAACAGGTTGCGCTCATAGAAAGATTTTAAGAATCTAAAGTTTGTTTCAAAGAGAAAAGAAAAAAGGAAGCTGACTTTTTTGTTTCTTTATGATATTCAGGAAGAAATGTTGAGTGGAGTGGCTATTCAGTTGGGTTCTTTCTATAGTTTGGAGCCAAGAGGTTTATTCCATTAAATACTAGTTGAACCACACATCACATTTTCAATTGGACTTGCATCTCAAACTAGAAAAAGTGGTTCCAAATTCCAATGCTCCAAATGGAAAGTGGTTATAATTATCAACTTCATATCCCTTTTATTTTAGTCATCCAAGTTTTACAAGTATCTAATAGGTTTATGAACCTTTAATTTTGTATCTAATAGGTCTCGAAAGTTTAAAAGTATTCAATAGGTTCTTAAACTTTCAGTTTTGTGTCCAAAAAGTCCATTGGCCAATTGACATAAAACTCAATTTTGTCTTCAATAGAACATTGACTTATCAATTTCGTGTTTCTTACATTTGTACATTAAAAAAAAAAAAAAAAAAAAAAAAAAAGTCTAAGAGGGTAAGAAGATGCAAAAATGAAAGTTCATACACATTTTTTAAGTCTAGGGTCCTACCAAAGACTAAACATGTAATTCAACTTATATTTAAAAAAAAAAAATTAGTAAACCACATTAGAAGTTAGGAAAATTTAAAGAGAAACAATAATAAAACAACTAATACATAAAGTTTCTTTGATGAGTTTATGGATAACCATCAGATCTCAACTTTATAATATAGATCCTAATATTCTATAATTTCAGTCCAAGATGATCTCAAATCCAAGGCGAGAGATATTTGTAAGAAACAAATAGAAGGGCTTAGCCTATTGGTGCTTGTGACATATTATATCATAAATGGCAATGAAAATCTTACCGCAGATAGCTACGTCAATCGCTGATGCTAATTTCAAACTTTGATAAAATCCCACGCTTTGTATCCTGTCAAAAATCACTTGCCAAATCCTTTAACCCTCAACAGTTATATTCTCTCTCAATCTCTCTGTTTGTTCTTCCTTTTTGCTTCAGCCATTTCCAGTTCTTCTGAAGAGCTTAGCTCTGTGATGGATCAAACATGGAGATTTGCAGGGAGTGGAGAAGAAGCTGGAACTGCAATGGAGTCAGCAATGAAGGAAGAAAGAGAAGGGAAGAGGAAGGAGAATCTGAAGAGTTCAATGATGAAAACTTGGGTTTCAATGGCAGTGACAAGCATGATGGGAGGGCTTGTGTTTGGTTGGTGGGAGTTTCAGTTTCATTCAACAAACAGACAACTGTGGATGGTACCTTTTGGTCTTGTTTTCATGATTGCACCCATTTTTGTTATGATGTCTGTTCTTATCTCTAGTTTCTGCACTTCCATGGATCATAAAGCTACTTGGGCAGTTCCATCATCAGACCATGTGATCCAACAATCTGATGAAATTAGATGA ATGTCAACTAAGGAAGAAATGTTGAGTGGAGTGGCTATTCAGTTGGGTTCTTTCTATAGTTTGGAGCCAAGAGCCATTTCCAGTTCTTCTGAAGAGCTTAGCTCTGTGATGGATCAAACATGGAGATTTGCAGGGAGTGGAGAAGAAGCTGGAACTGCAATGGAGTCAGCAATGAAGGAAGAAAGAGAAGGGAAGAGGAAGGAGAATCTGAAGAGTTCAATGATGAAAACTTGGGTTTCAATGGCAGTGACAAGCATGATGGGAGGGCTTGTGTTTGGTTGGTGGGAGTTTCAGTTTCATTCAACAAACAGACAACTGTGGATGGTACCTTTTGGTCTTGTTTTCATGATTGCACCCATTTTTGTTATGATGTCTGTTCTTATCTCTAGTTTCTGCACTTCCATGGATCATAAAGCTACTTGGGCAGTTCCATCATCAGACCATGTGATCCAACAATCTGATGAAATTAGATGA ATGTCAACTAAGGAAGAAATGTTGAGTGGAGTGGCTATTCAGTTGGGTTCTTTCTATAGTTTGGAGCCAAGAGCCATTTCCAGTTCTTCTGAAGAGCTTAGCTCTGTGATGGATCAAACATGGAGATTTGCAGGGAGTGGAGAAGAAGCTGGAACTGCAATGGAGTCAGCAATGAAGGAAGAAAGAGAAGGGAAGAGGAAGGAGAATCTGAAGAGTTCAATGATGAAAACTTGGGTTTCAATGGCAGTGACAAGCATGATGGGAGGGCTTGTGTTTGGTTGGTGGGAGTTTCAGTTTCATTCAACAAACAGACAACTGTGGATGGTACCTTTTGGTCTTGTTTTCATGATTGCACCCATTTTTGTTATGATGTCTGTTCTTATCTCTAGTTTCTGCACTTCCATGGATCATAAAGCTACTTGGGCAGTTCCATCATCAGACCATGTGATCCAACAATCTGATGAAATTAGATGA MSTKEEMLSGVAIQLGSFYSLEPRAISSSSEELSSVMDQTWRFAGSGEEAGTAMESAMKEEREGKRKENLKSSMMKTWVSMAVTSMMGGLVFGWWEFQFHSTNRQLWMVPFGLVFMIAPIFVMMSVLISSFCTSMDHKATWAVPSSDHVIQQSDEIR Homology
BLAST of Lag0020613 vs. NCBI nr
Match: KGN56384.1 (hypothetical protein Csa_011278 [Cucumis sativus]) HSP 1 Score: 159.1 bits (401), Expect = 3.2e-35 Identity = 88/124 (70.97%), Postives = 95/124 (76.61%), Query Frame = 0
BLAST of Lag0020613 vs. NCBI nr
Match: KAG6582696.1 (hypothetical protein SDJN03_22698, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 124.0 bits (310), Expect = 1.1e-24 Identity = 71/116 (61.21%), Postives = 84/116 (72.41%), Query Frame = 0
BLAST of Lag0020613 vs. NCBI nr
Match: KAF3973370.1 (hypothetical protein CMV_003195 [Castanea mollissima]) HSP 1 Score: 91.3 bits (225), Expect = 8.1e-15 Identity = 45/91 (49.45%), Postives = 61/91 (67.03%), Query Frame = 0
BLAST of Lag0020613 vs. NCBI nr
Match: KAA0048855.1 (putative permease/transmembrane protein [Cucumis melo var. makuwa] >TYK20807.1 putative permease/transmembrane protein [Cucumis melo var. makuwa]) HSP 1 Score: 86.3 bits (212), Expect = 2.6e-13 Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 0
BLAST of Lag0020613 vs. NCBI nr
Match: KGN56386.1 (hypothetical protein Csa_010779 [Cucumis sativus]) HSP 1 Score: 84.0 bits (206), Expect = 1.3e-12 Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|