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Lag0020605 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCATTACTTGCTCAACGCCCTCTCTTACGTCCGGTCGATCTCTTCCTTGTAAGACTCCTTCATCTCCCCTTCCCATTCACTCATATCTTCAATTTCGCCTGTAATTTTGAACTTTCCGATGAGATGTACACAGATTTCTACTTGCATTTTATGGGTTTAAAACCTTCTATCCCTACATATTCACATTGAAGCTCGGATGATTCGGCTTTTACTTTGTTTTGTTTCGTTTGCTCTTAATTGGGTTATTTGATAGAGCTCTTAATTGAACTGGGCGACACGATATGGATTAAGATTAACAATGTTCATTTGGGAATTCGCCTCGTATCATCCTGTTTGATTTGCTCGTGCAATTCATCGCCTATTTCTTTATCAGCAATGAGTTAATTTTTCGTAGTTGAGCTGCTCTGCGTTATATATATTTTTCGTTATACGATAAAAGGGAAATTTGACTGTTCTTCAACTCATGCTTCACTGGCCAACAAGAGCATAGCTGAACTGACATAAAGATGTATTGATAACCACGAGCTCTGTGGTTCGAATACCCACCCCATACTGTCAAAAGAAAAAGAAAAAAAAAGCTCATGCTTCACTGAATTGGGGTGAATGTTGTATTGGTTCATCTCAATCAGTTCCTTTAGTTTTACAAGTCTATTGAAGCTATCTGGCAGACAGGGCTTTTTCAGCATGTGCAACATCAAGAGCTTTTATTACTCAAAATAAGCAACTACAGCGCTACTGCTCCTGCCATAGTTTCAATCATAGCAGGTTAGATTTTGAGGATTGGTCAATGATTGTGATTTGTATTTCTCAGTGAAGGTAACTTATGATTAGATAATTTCTGACCAGAAAATTTTCCGTGCATGCTCAGGCGAGAGAATTCTTATATATCATTATCTGATGAGAATTCCAGGCGAAAGATTCTCCTATTTTTCTTATCAACTACGGTTTTACTTCCAACTTGGCATGCTTCTGCCAAAACAAAGAGTAAGAATCCATACGATGAGAGGCGCTTATTAGAGCAAAACAAGCGGAGGCAAAGAGAAAACAATGCACCCGATGACTTTCCAAGTTTTGTCAGAGAAGGTATGTATCCTCCATGGCTCTATCAGGGTATAGTTATGGCATTGCCTTTCTAAATGTAACTGTGATGTCTTCCCTGAAAAGAAAAGAGAGAATAAAATAAAGTCAATGTATATAAAAGATTACAAATTTTCTAATCTGTGGCTCAGGTTTTGAGGTTAAGGTTATAGCACCAGAAACCTATGTAAAACGTGACTCTGGGCTCATATACTGGGATATTGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTTTGATTTTCTTCTTCAAAGCTAAAATATCTTTTCTTCAGTTTTCTCACAGAAACAATTTTTATCTGTTAGTGGTTGAATATTCAAGACCAGCAAACCAATGCGGTGCAGTTAAAAGGGTCCTTTATATTGTGAAATAAAGTATTGGATTCTACTCTCGTTAAGTCTTAACGTTGGCATTTGTCACAGATTTCTATCATTAGATGATATCCTGGGCTAGAAGAGAATTTAGCATTTCTTCAGATGAATATTGTTTGGCTTGCTAATTTGTCTGTCCCATTTTTATGATGTCAGTATGAATTGAGAGTTTTTTTTTTTTTTTTTGAGAGAGAGAGAGAGAGAGGAGATGAGTAAGATATTTTAGATTTCCAGGAAATGAGTTCCAATCTCTGATGTCAGCCAACAAGATTGATGCCTTCAAGATCATCCATGTAAGAACTCTTTGAAGGCAAAATAATGTTTAGTGAACATTCACTTACAATTCTTCAAAGATTGTCGATCCATTGATGACTATTGTGTACAAGGATGTCAGAAGTTTTATAAAGATGCTATATGCACGTGCACCTTTTACAGTAATTGCGTGGCTTAGAATTGATTATCATAGACATAGTTTAGTGATTAGGTCCCTTGAAAGACAAAGCTGAGTTTGAGGGGTGTAATTTCTAGGAATTTCAGAATGATCGTTTGATCTCTGGAATTGTACGAAAAATATCTCCTGTTTTGCCTGTATAATTGTATGTAGAATAATTCAGATGTTGATGGTAAAAATAATTCACCGACCTATATATAAACAACTTTGTAATAATTAACTAGTATCTAGTTTTATATTGCACGGTTTTGACATTAGTGGAATTTCATGGTGTACATTGTGACTCTGAAGGTCTTTTCAGGTGACTTTTCACTATGTTGGCTACAATGAGTCTGGTCGTCGTATTGACAGCACATACATACAGGGTTCTCCTGCCAAAATCCGTGTGGGAACTAAGGCATTGGTCCCAGGTAGTTAAATTCCCCCCACCATCACCACACACACACAAAAGAGGGAAAAAACACTCACCAATATTGTAAGAGGAAGAAGAGATGGACTTGCGGTTGAAAATAACGAGATAGCATCTGAAAGAGAAATATTGCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGAGTTCTCAAGCATATGATTATTGTGTCAGTTTTGTGTAAAAAATCTTAAATTTCTTGTGACTGATTGTTATATATGCAGCAATTTTTAGTCATGCAAGGAAAGACCACCCACAATTAGACCTCCATTCCTACAGTTGTTTTTTCACTTCATAGAATTTGTTTCCAGCTAGTCAAATCTCTATCTTTTACCTGAGATTGTTTATATTAGCATATCAAGTTAAACTAGGTTTGCTTGCTTAGCGGAACAAGAACTTTGATCTTAGTAGGTGAGCGCATCTGATGTTGGAGAATAATATATTCTAGGTTGGGGCAAGTTAGGTAGTCGCCCGATCAAGATAAGAGAGTAATATTAAGGAACTCTAGCACAGACATTAGTGAAACGGAGCATAGTTCAACTGATTGAGCCACATACCTTCAACCAATAGATTAAAGGTTCGAATCCCTTCACCTTATATGTGGTTGAACTCAAAAAGTTTCTCAAACCAGCTTTAATAATAATAAAAAAAGTTGAAAAAAAAAACTTAAAAAATTGGAGTTATTATGAAACATTTTTTAAATGCACCTAGAAAAACGTCCAAACTTGACACGCTCTAAATTTTTTACCCATTCTTTACAATATAAGGGTCTGTGTTTCTTGCAAAACAAACTTCCCGGGAATGGACCTTACTAATTCAGAAAACTCTGGTTCTATACTTAAACTAGTGAACAAAAATTAGATGTTCTTAATAATCTTGAGGCTTGTTGGAAAAGCACTACAATAAGCCAAATTCCTTTCCGAGTTTATTTTAAGATCTCTGAGGGACATTGGGAAAACAGCCCCTTTATATCTTTATTCTCGCTATTGCAAAGGACACGCGTTAATAAGGAGTAAGGCAAAAGAAAGAAATGACTTTTTGCACCCAATCAGCCCTGTTGATTTCTCCCAATTCTGAGGACCAACTAAAGAATTCAATATCGTTAGGATTTCTTTCTAAACAGCTTTGGGACTGCCTTGGGTCAGAACTCTCTGGTCGCTAGTTAGACGGCAGAGAGTGGGTTGCATCATGCAAACCCTTACATCAAAGAACCTTTAACTGTTGCTTGGCTAGGAGTCCCCAGCACATTTTTAAGAAATTGGCTCACTCCATTGTCTCTCTATCTAACGAGCAATTTTCTATACCGAAGATCTGAACCACCTTTATTCGCATTCCACCATTTCTTGATTGAAAAATCATGTGAGTGGGCAATTGATGGAATCTAGAAAAGAAACGTCACTTTATTCAGAGATCCACACATCCTCCCAAGATCAAGAAGAAACATTATCACCCTTTCCTGCCTTAAGAGAAGAGGAAGGTTTCGCAAAGATGTTATATTCAGTGACGAATCTCCTAGGCTTGTTTTCCTAAGATCTATTCTATTGGCAGTAAGCCAACCGCCATTAAGAACCTCATATTTGCAACAGTAGAGTTCTGTAATGCACTCACTTATGAACATTTTTCTACCCACTTAGATGCAATGGCCACGTTTTTCTGCATAAATTTTTTCAAAACCTAAGCCTCCAGCAATCAGGTGAAGAGCTATTGGACTGCATTTAATAAAGTGAATTCCTCCTCCAGTCCACATCCTTGGCATTGTCATTTATACTTCTCATCCTCCTTCCCCCTGGCCATCCTTTTTGGAAAGAGAGTGATTTCTTCTGTATATAAATTGACGTTCATATTTCTCGCGAGTAATATCCATGGGAGGCTTGTGATTAAATTTCAAAGAGAACTGCGGAATGGGCATGATAGAATAGCATATTGCCTTGTTGTCACAGAGCCACAAACTTAACTTTTGTCCTTTCTATCTGCCAGCCTCTGAAACTGGAATCTGGTAGTTTTCTGCTCCACTTATTTTGTACATTTCTTCCATGCATGTAAGACACAAGGAATTCTGGATCTCAGTTATCTAATCAGATATGCAGATAAAACTTCATTGTTTTGTCTTGGAGTAAAATTGTCTTCATTGTTTCCATATCTTGAAAAACTTATGGATACCCATGACTTACTGCTTTAAGTTGAAAAGGTAGAATGCTCGCATTAATGTTCACTTGTCTGCTTACCTTGGTGGTCACCACTTTTTATGTTTCTGTAACTAATGTAACGTTTGATGATTTATCTCAATTGATTACACTTTCGATTATTTCCAGGTGGGGCCTTCCACATTTTTCAGCTCAAAGCAGTTTGAAGTTTTTGATGTGGAACTGTTAAACGTCCAGGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGATATTGTTTGCAACTAG ATGCTCATTACTTGCTCAACGCCCTCTCTTACGTCCGGTCGATCTCTTCCTTGTAAGACTCCTTCATCTCCCCTTCCCATTCACTCATATCTTCAATTTCGCCTGGCTTTTTCAGCATGTGCAACATCAAGAGCTTTTATTACTCAAAATAAGCAACTACAGCGCTACTGCTCCTGCCATAGTTTCAATCATAGCAGGCGAGAGAATTCTTATATATCATTATCTGATGAGAATTCCAGGCGAAAGATTCTCCTATTTTTCTTATCAACTACGGTTTTACTTCCAACTTGGCATGCTTCTGCCAAAACAAAGAGTAAGAATCCATACGATGAGAGGCGCTTATTAGAGCAAAACAAGCGGAGGCAAAGAGAAAACAATGCACCCGATGACTTTCCAAGTTTTGTCAGAGAAGGTTTTGAGGTTAAGGTTATAGCACCAGAAACCTATGTAAAACGTGACTCTGGGCTCATATACTGGGATATTGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGACTTTTCACTATGTTGGCTACAATGAGTCTGGTCGTCGTATTGACAGCACATACATACAGGGTTCTCCTGCCAAAATCCGTGTGGGAACTAAGGCATTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCAAAGCAGTTTGAAGTTTTTGATGTGGAACTGTTAAACGTCCAGGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGATATTGTTTGCAACTAG ATGCTCATTACTTGCTCAACGCCCTCTCTTACGTCCGGTCGATCTCTTCCTTGTAAGACTCCTTCATCTCCCCTTCCCATTCACTCATATCTTCAATTTCGCCTGGCTTTTTCAGCATGTGCAACATCAAGAGCTTTTATTACTCAAAATAAGCAACTACAGCGCTACTGCTCCTGCCATAGTTTCAATCATAGCAGGCGAGAGAATTCTTATATATCATTATCTGATGAGAATTCCAGGCGAAAGATTCTCCTATTTTTCTTATCAACTACGGTTTTACTTCCAACTTGGCATGCTTCTGCCAAAACAAAGAGTAAGAATCCATACGATGAGAGGCGCTTATTAGAGCAAAACAAGCGGAGGCAAAGAGAAAACAATGCACCCGATGACTTTCCAAGTTTTGTCAGAGAAGGTTTTGAGGTTAAGGTTATAGCACCAGAAACCTATGTAAAACGTGACTCTGGGCTCATATACTGGGATATTGAAGTTGGTAATGGTGATTGCCCCAAGGATGGTCAGCAGGTGACTTTTCACTATGTTGGCTACAATGAGTCTGGTCGTCGTATTGACAGCACATACATACAGGGTTCTCCTGCCAAAATCCGTGTGGGAACTAAGGCATTGGTCCCAGGATTTGAGGAAGGAATTCGAGGCATGAGACCAGGGGGAAAGAGGAGAATAATAATTCCACCAGAACTTGGACCACCTGTGGGGCCTTCCACATTTTTCAGCTCAAAGCAGTTTGAAGTTTTTGATGTGGAACTGTTAAACGTCCAGGATTGTCAGAGGAGGACAATAGGCTTTTACTCTGATATTGTTTGCAACTAG MLITCSTPSLTSGRSLPCKTPSSPLPIHSYLQFRLAFSACATSRAFITQNKQLQRYCSCHSFNHSRRENSYISLSDENSRRKILLFFLSTTVLLPTWHASAKTKSKNPYDERRLLEQNKRRQRENNAPDDFPSFVREGFEVKVIAPETYVKRDSGLIYWDIEVGNGDCPKDGQQVTFHYVGYNESGRRIDSTYIQGSPAKIRVGTKALVPGFEEGIRGMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLNVQDCQRRTIGFYSDIVCN Homology
BLAST of Lag0020605 vs. NCBI nr
Match: XP_038891578.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X3 [Benincasa hispida]) HSP 1 Score: 478.4 bits (1230), Expect = 4.1e-131 Identity = 238/275 (86.55%), Postives = 249/275 (90.55%), Query Frame = 0
BLAST of Lag0020605 vs. NCBI nr
Match: XP_038891581.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X4 [Benincasa hispida]) HSP 1 Score: 472.2 bits (1214), Expect = 3.0e-129 Identity = 237/275 (86.18%), Postives = 248/275 (90.18%), Query Frame = 0
BLAST of Lag0020605 vs. NCBI nr
Match: XP_004133781.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucumis sativus] >KGN56374.1 hypothetical protein Csa_010638 [Cucumis sativus]) HSP 1 Score: 465.7 bits (1197), Expect = 2.8e-127 Identity = 235/275 (85.45%), Postives = 246/275 (89.45%), Query Frame = 0
BLAST of Lag0020605 vs. NCBI nr
Match: XP_038891572.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 463.4 bits (1191), Expect = 1.4e-126 Identity = 224/240 (93.33%), Postives = 233/240 (97.08%), Query Frame = 0
BLAST of Lag0020605 vs. NCBI nr
Match: XP_023529045.1 (peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 462.2 bits (1188), Expect = 3.1e-126 Identity = 233/275 (84.73%), Postives = 242/275 (88.00%), Query Frame = 0
BLAST of Lag0020605 vs. ExPASy Swiss-Prot
Match: Q0WRJ7 (Peptidyl-prolyl cis-trans isomerase FKBP20-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP20-2 PE=1 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 3.6e-85 Identity = 155/210 (73.81%), Postives = 178/210 (84.76%), Query Frame = 0
BLAST of Lag0020605 vs. ExPASy Swiss-Prot
Match: P65765 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O157:H7 OX=83334 GN=fkpA PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14 Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 0
BLAST of Lag0020605 vs. ExPASy Swiss-Prot
Match: P65764 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=fkpA PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14 Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 0
BLAST of Lag0020605 vs. ExPASy Swiss-Prot
Match: P45523 (FKBP-type peptidyl-prolyl cis-trans isomerase FkpA OS=Escherichia coli (strain K12) OX=83333 GN=fkpA PE=1 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 1.5e-14 Identity = 45/122 (36.89%), Postives = 69/122 (56.56%), Query Frame = 0
BLAST of Lag0020605 vs. ExPASy Swiss-Prot
Match: O22870 (Peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FKBP16-3 PE=1 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 3.3e-14 Identity = 68/223 (30.49%), Postives = 96/223 (43.05%), Query Frame = 0
BLAST of Lag0020605 vs. ExPASy TrEMBL
Match: A0A0A0L5Q7 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_3G118090 PE=4 SV=1) HSP 1 Score: 465.7 bits (1197), Expect = 1.3e-127 Identity = 235/275 (85.45%), Postives = 246/275 (89.45%), Query Frame = 0
BLAST of Lag0020605 vs. ExPASy TrEMBL
Match: A0A6J1IWW5 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111479210 PE=4 SV=1) HSP 1 Score: 461.1 bits (1185), Expect = 3.3e-126 Identity = 232/275 (84.36%), Postives = 242/275 (88.00%), Query Frame = 0
BLAST of Lag0020605 vs. ExPASy TrEMBL
Match: A0A6J1DHQ6 (Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111021016 PE=4 SV=1) HSP 1 Score: 457.2 bits (1175), Expect = 4.8e-125 Identity = 226/275 (82.18%), Postives = 241/275 (87.64%), Query Frame = 0
BLAST of Lag0020605 vs. ExPASy TrEMBL
Match: A0A6J1E9D1 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111431911 PE=4 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 6.2e-125 Identity = 232/275 (84.36%), Postives = 240/275 (87.27%), Query Frame = 0
BLAST of Lag0020605 vs. ExPASy TrEMBL
Match: A0A1S3AVI8 (Peptidylprolyl isomerase OS=Cucumis melo OX=3656 GN=LOC103483136 PE=4 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 6.2e-125 Identity = 231/276 (83.70%), Postives = 243/276 (88.04%), Query Frame = 0
BLAST of Lag0020605 vs. TAIR 10
Match: AT3G60370.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 316.2 bits (809), Expect = 2.5e-86 Identity = 155/210 (73.81%), Postives = 178/210 (84.76%), Query Frame = 0
BLAST of Lag0020605 vs. TAIR 10
Match: AT2G43560.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 80.5 bits (197), Expect = 2.3e-15 Identity = 68/223 (30.49%), Postives = 96/223 (43.05%), Query Frame = 0
BLAST of Lag0020605 vs. TAIR 10
Match: AT4G19830.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 70.5 bits (171), Expect = 2.4e-12 Identity = 44/158 (27.85%), Postives = 70/158 (44.30%), Query Frame = 0
BLAST of Lag0020605 vs. TAIR 10
Match: AT4G25340.1 (FK506 BINDING PROTEIN 53 ) HSP 1 Score: 69.3 bits (168), Expect = 5.4e-12 Identity = 48/160 (30.00%), Postives = 80/160 (50.00%), Query Frame = 0
BLAST of Lag0020605 vs. TAIR 10
Match: AT5G45680.1 (FK506-binding protein 13 ) HSP 1 Score: 67.4 bits (163), Expect = 2.1e-11 Identity = 36/86 (41.86%), Postives = 49/86 (56.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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