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Lag0020598 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACACAGTTGAGGGCTTCAATGGTGCTGATTTGAACCCTGATGCTAAAGAGTGGAACCCCGTTTACGATTGCGCTCCCGAGGAAGATCGATGCCTCTTTCTCACTTTCTCGAACGGGTATCCGCTCTCCGAGCACCAAATCGTCAATTTCTTCACTCGGTATGCTCTTTGTAAGAACGACTCTTTTCGTCTTCTTTCTGTTAAGAAGGGGCAAAATTTTACATTCTAATTTCTTAAACATTTAGAAGCTATTCTAAATTAGGGGGAAAATTTAAAATCTTCAACATTGAAGTTCTCAATTGCTTCCTACTTTCTTCTTTTATGCAAATTTTTGTACAAAGAGGTTAGAACTCGAAGTTTTTATAGAGAGGGGCAAAATTCTACATTCTAATTTTATGTATAAATAAAATTTCAATTTGAAAAAAAAAAAAATAGAGCTGGTAAATTAGAGAGATTTTAAAAATTTATCAACTTTTTAGCAGATCTAAAATTAATAGGGCAATTGCCCTACTCTTCTAATTCCCCTATTTTTATGCATCAATTTCTATCATTGATAGGGTTAGGACAAGGAAACTCTCCTTATTTCGACTTTACTTTTAGATCTCCTTCACTTTTAATTGATGTACTCCGACAGAAAATATGGGCCGTGTATCGAAAGGGTGTATGTGCATTATCCGGAGGGAGGGAATCAACCGCCATTGTTCGGAAAGGTTGTGTTTGTTGCATCTTCGATACCAGCAATCGTTCTAGGAGGAAAAGACGAAGCGAAGTTTTCTATTGAGAGCAAGACGCTGTGGTGTAAGAGATACGAAGCTCGAAAAGCTCGGTCTAGGGTTTCGGCTTCGGCTTCTCGACGGTAATCAAGAAACTGAGATGTAAATGAAGAAGGGCTAGTTTGATTTTGTTTCAAGTGTGAATTGCTGCCTTTGAATGTGTTTGGATCAGCCTTTCTGTCAGAAGTTGAAAGTTTATTCATTGAAATGAAAGGGAAGATGAGACATGTCAGTTTCTTTTGCTGAAATAAATAGCAATTAATGAGGGTTTTGTGCTGTGAAATTCTCTGATTTATGCTTTTCTTTTTGTTTTCTTTTAGGGACTTTGAGATGAATCAGATCATATCAATTGAACATTGCATTTAGAGAAACATCCAACCCAGAATGAATGAGGTTTTCCTTAAAAAACAAGGAAAAATTAAGGGTACTATTTTGTATGATAAATCTCAATCGTTATTTTTTTTATAGAAAGAAACTATAAATGTATGGAGATTTCTTTTTTTTTTTTTTTAAATTCAACAATATGTATAGGTGGAGATTTAAATTTTTGATCTCTTAATTAATTAAGAATATCATGTCAGATGGTCAAGCATGATAAGTTTTCCTTTACTAATTGGACCTAGATGTAAAACTGGTCAAACTAGATATGCAAAACTTTGATATGATTCTAGTCATAGATTGATTGGTTGTTGCTAACCCAAGCCACTATCGATTGCTATAAGGAAGGAGGTTGAACTATTTGAACTATGTTTAGTTTGATATATATAAACATAAGAAGATAATGTGTCATATAAATTGTTGTGGGTGATTCTGGACCACTCCAGAATCCAAGGACTAAGCAGGATAACGCAGCACCAACACGAAAGCTTGATCGGGAAGCGGACCCCGGAAGAGAGCGAGTCGAAGGGATTGGGCGTTCGCCCAATCCCATGCTCGGCCCACTCGTGTGGCCCAAGTTCCTTTCGCCTCCGTTTGGTCCCTACTGTCCCGGTTCGTCCCAGTTCCACTCGGTTCAGTCCAGGATCGCCTCCGAGCGTCTAG ATGGACACAGTTGAGGGCTTCAATGGTGCTGATTTGAACCCTGATGCTAAAGAGTGGAACCCCGTTTACGATTGCGCTCCCGAGGAAGATCGATGCCTCTTTCTCACTTTCTCGAACGGGTATCCGCTCTCCGAGCACCAAATCGTCAATTTCTTCACTCGAAAATATGGGCCGTGTATCGAAAGGGTGTATGTGCATTATCCGGAGGGAGGGAATCAACCGCCATTGTTCGGAAAGGTTGTGTTTGTTGCATCTTCGATACCAGCAATCGTTCTAGGAGGAAAAGACGAAGCGAAGTTTTCTATTGAGAGCAAGACGCTGTGGTGTAAGAGATACGAAGCTCGAAAAGCTCGGTCTAGGGTTTCGGCTTCGGCTTCTCGACGAATCCAAGGACTAAGCAGGATAACGCAGCACCAACACGAAAGCTTGATCGGGAAGCGGACCCCGGAAGAGAGCGAGTCGAAGGGATTGGGCGTTCGCCCAATCCCATGCTCGGCCCACTCGTGTGGCCCAAGTTCCTTTCGCCTCCGTTTGGTCCCTACTGTCCCGGTTCGTCCCAGTTCCACTCGGTTCAGTCCAGGATCGCCTCCGAGCGTCTAG ATGGACACAGTTGAGGGCTTCAATGGTGCTGATTTGAACCCTGATGCTAAAGAGTGGAACCCCGTTTACGATTGCGCTCCCGAGGAAGATCGATGCCTCTTTCTCACTTTCTCGAACGGGTATCCGCTCTCCGAGCACCAAATCGTCAATTTCTTCACTCGAAAATATGGGCCGTGTATCGAAAGGGTGTATGTGCATTATCCGGAGGGAGGGAATCAACCGCCATTGTTCGGAAAGGTTGTGTTTGTTGCATCTTCGATACCAGCAATCGTTCTAGGAGGAAAAGACGAAGCGAAGTTTTCTATTGAGAGCAAGACGCTGTGGTGTAAGAGATACGAAGCTCGAAAAGCTCGGTCTAGGGTTTCGGCTTCGGCTTCTCGACGAATCCAAGGACTAAGCAGGATAACGCAGCACCAACACGAAAGCTTGATCGGGAAGCGGACCCCGGAAGAGAGCGAGTCGAAGGGATTGGGCGTTCGCCCAATCCCATGCTCGGCCCACTCGTGTGGCCCAAGTTCCTTTCGCCTCCGTTTGGTCCCTACTGTCCCGGTTCGTCCCAGTTCCACTCGGTTCAGTCCAGGATCGCCTCCGAGCGTCTAG MDTVEGFNGADLNPDAKEWNPVYDCAPEEDRCLFLTFSNGYPLSEHQIVNFFTRKYGPCIERVYVHYPEGGNQPPLFGKVVFVASSIPAIVLGGKDEAKFSIESKTLWCKRYEARKARSRVSASASRRIQGLSRITQHQHESLIGKRTPEESESKGLGVRPIPCSAHSCGPSSFRLRLVPTVPVRPSSTRFSPGSPPSV Homology
BLAST of Lag0020598 vs. NCBI nr
Match: KAA0048838.1 (hypothetical protein E6C27_scaffold171G00510 [Cucumis melo var. makuwa] >TYK20790.1 hypothetical protein E5676_scaffold291G00510 [Cucumis melo var. makuwa]) HSP 1 Score: 238.0 bits (606), Expect = 6.8e-59 Identity = 110/128 (85.94%), Postives = 120/128 (93.75%), Query Frame = 0
BLAST of Lag0020598 vs. NCBI nr
Match: KAE8650218.1 (hypothetical protein Csa_011746 [Cucumis sativus]) HSP 1 Score: 233.0 bits (593), Expect = 2.2e-57 Identity = 107/128 (83.59%), Postives = 120/128 (93.75%), Query Frame = 0
BLAST of Lag0020598 vs. NCBI nr
Match: XP_023540960.1 (uncharacterized protein LOC111801189 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 229.9 bits (585), Expect = 1.9e-56 Identity = 107/122 (87.70%), Postives = 114/122 (93.44%), Query Frame = 0
BLAST of Lag0020598 vs. NCBI nr
Match: XP_022944781.1 (uncharacterized protein LOC111449194 [Cucurbita moschata] >KAG6597035.1 hypothetical protein SDJN03_10215, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 228.0 bits (580), Expect = 7.1e-56 Identity = 106/122 (86.89%), Postives = 113/122 (92.62%), Query Frame = 0
BLAST of Lag0020598 vs. NCBI nr
Match: KAG7028512.1 (hypothetical protein SDJN02_09693, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 218.8 bits (556), Expect = 4.3e-53 Identity = 105/129 (81.40%), Postives = 112/129 (86.82%), Query Frame = 0
BLAST of Lag0020598 vs. ExPASy TrEMBL
Match: A0A5A7U0U8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold291G00510 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 3.3e-59 Identity = 110/128 (85.94%), Postives = 120/128 (93.75%), Query Frame = 0
BLAST of Lag0020598 vs. ExPASy TrEMBL
Match: A0A6J1FZ16 (uncharacterized protein LOC111449194 OS=Cucurbita moschata OX=3662 GN=LOC111449194 PE=4 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 3.4e-56 Identity = 106/122 (86.89%), Postives = 113/122 (92.62%), Query Frame = 0
BLAST of Lag0020598 vs. ExPASy TrEMBL
Match: A0A0A0L3N4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118030 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 4.3e-51 Identity = 101/128 (78.91%), Postives = 113/128 (88.28%), Query Frame = 0
BLAST of Lag0020598 vs. ExPASy TrEMBL
Match: A0A6J1E9T6 (uncharacterized protein LOC111432088 OS=Cucurbita moschata OX=3662 GN=LOC111432088 PE=4 SV=1) HSP 1 Score: 209.1 bits (531), Expect = 1.6e-50 Identity = 94/113 (83.19%), Postives = 106/113 (93.81%), Query Frame = 0
BLAST of Lag0020598 vs. ExPASy TrEMBL
Match: A0A6J1IWW8 (uncharacterized protein LOC111479214 OS=Cucurbita maxima OX=3661 GN=LOC111479214 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.8e-49 Identity = 92/113 (81.42%), Postives = 105/113 (92.92%), Query Frame = 0
BLAST of Lag0020598 vs. TAIR 10
Match: AT5G13620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 75.1 bits (183), Expect = 7.1e-14 Identity = 37/92 (40.22%), Postives = 55/92 (59.78%), Query Frame = 0
BLAST of Lag0020598 vs. TAIR 10
Match: AT1G64870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G45200.1); Has 99 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.8 bits (164), Expect = 1.1e-11 Identity = 36/111 (32.43%), Postives = 62/111 (55.86%), Query Frame = 0
BLAST of Lag0020598 vs. TAIR 10
Match: AT1G49290.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits to 93 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 67.4 bits (163), Expect = 1.5e-11 Identity = 33/86 (38.37%), Postives = 54/86 (62.79%), Query Frame = 0
BLAST of Lag0020598 vs. TAIR 10
Match: AT3G45200.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 95 Blast hits to 91 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 63.9 bits (154), Expect = 1.6e-10 Identity = 36/110 (32.73%), Postives = 58/110 (52.73%), Query Frame = 0
BLAST of Lag0020598 vs. TAIR 10
Match: AT5G11220.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G64870.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 61.6 bits (148), Expect = 8.1e-10 Identity = 30/98 (30.61%), Postives = 53/98 (54.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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