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Lag0020583 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAATGTGTGCGCTACATTTCAAACCATTTCCGCTGCAAAGCCACATCCTCAGCAACCACAATCTTCGCTCTCCGACGATACTCTGGTTTCCAAACCTAATCTGCAAATGCGTTCCCGAAACAAGGGCGATTTCCGCCGTTGAACTTCCTCCCAATGCCCTTCGCCGCAAGCTCGACCCTCACTGGAGAGGAGGTTTCAGTCTAGGCGTCGACCTCGGAGCGTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCTACTCGTCCTCTCACCGTAATTTATCTGTCAATTAAACTTTATTTCATTTCATTTTTCCGTCTGTGCGCTTTCTTGTACCTTCTAATTTCAGGACATTGAACGTCTCGAATGTTTGCCTTGTTGCTTGCTTTAGATTTTTCGGTATTCAGGAGGAAATTCTTTCTGGCTATTTTTCTCCTAAATTTAGTGTTAAATGCGTTATTAACGCAATGGTGATCAATTGAATTCCGCTTCTTCTGGGCATACGCGTTTGTAATCTGGCGAACTGCAGACTGCTATTGTTCATTTACGTTTTGTACAATCCACTAACGCTCTTTTTCCCTGACGTTGTTTTATGTTATACCTAAATATTGAAATTATAAACGGTGTCCAGTATTTAACTCAGTGTTGTGAGTTATCAAATGTTTCGCCCTCATGATTTCTTTAGCTGGCTTAGGTTTTGGAGTTGCGAGGACAAAAGCTTGAAGTTAAGCTTATTGAGATTGCTGAACAGGAGGTACATTTCTCTCCCTCTCTGAAATGCTTTCAACGTATTGGAACTTTATTTCTTCTCTTTACTAGAGATTAATTGATGAAAAAACTGTAGGAAGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGACGGAAAAGAGACACCTCAATCGAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCTCGAGCAGCTGAAAGGTGAAATACACTGAATTATTGTACTTTGTTCTCCTATATTTTCTTTTCTGTTCTGATACAGCTTTTAGTTTAGGGGTTGGAGGGTTTACTTGCATGATGAACATGGGACAACTGAAGATGCGGAAAGCCATATGATTTCCAGGTATTGTTGTCCTCAGAACTTATGTTGTCTTTTGCTTAATATTGTTACCGTGGATTCTATCCTATAAAATTTTGATGCATCTCTTTTATTAGTATTGTTAGTGTGGATTCTGTATCCTGTAAAATACATTGCACTTAATGGATTGTCATTGAACAGAATGCCATATTGATTTATTCATTACCTTTGAGGATTTTGATGACATAGATTTGAGGGGTTTGTAGAAATGATAGAATACCACGTGAAGATTCTTAGGCTAATGAGGAACTAAAACTGATGTTAATCTCTACCGTATCCTGACATTAACCTCATGAATTTATCAAAGGCGATGCAGGCAATTGGTTGCTAATTGCTATTGTATTATTGGGATAGGTAGGAATTGAGGAGATGTGTACATTGAGATAAGAAGATAGGAAAAGCTCACCCCAAAATCAAAAAAGAAACATCCAAGAAGTATAATTATCACCATCAACTAGGAAATGAGTATATGGCTTGAGGACTCAATAGTCAATGTGGTGAACCAATTCCTACTCAAAATATGCAGACAAGTTCTGGAACCAATTCCTAAGGATTTATGGGGCCTGGACTTTTCCAAGAGCATTGGGATGCTATCATCCATTTTTTGTGTTATAAACTTGTTGACCGAAGCTCTTACTTTGTAGGTTGATGCTTGCTAAGCACACATTTGATATTTGTGGCTGGAAAAGAACAACAGAAGTTTTGAAGAGATAAAAGGAGTGAATAGATTTCTTGAATTTAGTGCATCCTCTTAGACCTCCTTACACAAAAAAAAAAAAAAAATCGTTTTTAATTACTCTGATTTTCTTTTTAAAGCTGGTTGGGAACCCTTCTTGAAACTCCTTGGGTTGGGCGGGGGGAATTCTTTGCTCTCTTCTGTGTACTCTTCTCATCAATTGGAGTTTTCTGCTTCCTATTTAAACAACAAGGAGAATTTAACAAAGACATAGAAAATCGATATGAGAAAAAGAATACCTCTAATGGGAACCTGGATTTGAGATTGCAATCGAGAAAATAGGGACTGAAACATATTACAGTGTTAGAGGAAAATACAAGTTTTACTAGCATTTGAGAGGTTTAGTTCTCATCCAACACTAATCCCAGAATATGCCAAATTCTCAAACCACCCTATAATGAGAATTCCCAGATCTGCAACTTCCTACAGGAAGCCCCCCATTATCTTCTCCACCTTTGTTACTTTACTGACGGAGGAAGGGATCTTAAATAAAGAAAGGAAGTAAGTTGGAATGTCACCCAACACAAGATTTGAACTTTTTCTACAACAGGGTTCCAATAGGATAGGACGAATGGTTTGAGGTTGTGGCCAAGGAGAAGACCTAAATAAGGAGTAGCGGGCCACCAACTTCACACTCTGCTGTGGCCTTCCCTCTTGCAATTTTGGAGGGATCACAATAATACAAATAAGAGAGTTCTTATTTCTATTGGTCTTAAGACCAGAAATAATCTCAAGTGCTTTCAAGATTTTGTTAAGATTAGCGAAGTAATTTTCCCCACCGAAATAAAAAGAAAATGTGTCATAAGTGAGCTACAGATGAGAGAGTCCCTCAACCACTTTTATTTCACCAAAAGCTACTTCACTTCAGTTGCAATCCGTACTTCCAGCCTCCTTTGATTAAAAATTAATTCTAATTGCAATTCAAGAAGGTGGTATCATTCCAACCTGCATCACTCTATTTTAGACTAAGTTGATATCCAAGTCTAATAGATCTAGTAACTTCTCTCTCCTTAATGAATTAGATACATTGCCTGGGAAATGAATTATTGAGGAGTGTATAAGAAAAATCTGCTTCACTAGGTTAATTTGATCCCCTTTGTAAATTAATGGGTCAAAGGAAATTGCAAGGCTTACTCAGCATCGAGATGCTTAGCTCTTTCTCAAGACTAATCCCAAAATATGCCCATTTCCCATTTTCCCCCCAAAGTTCACTATAAATAAGCCTATTGAAATCATTTCAACCTTAAACCTATAAGCAAATTACATTTTTTTTAAACAAAAAAAAAAAAGAAACAATTTCATCGATGTATGAAATTTACGTCCTATTAGCAAATCACTTGATCAATGAATTAGACATAAAAGTAAATGAAGTTATATCTAGTTGTGAGGACACCTTTTTGGGTTAGTCTCTTAATACAATCTGTCTTTTATTGAACTCCTTGTCAGTGTCCTGAATATAGTGCCTTGAAAAGATTCAGAGAGTTAGGAATCATGAACAGGATCAACATGGAGGAAAACACAGAATATGACTGCATTACAGAGACATGTAAGGAAACAAGGAGGTTGAACTAGATTAGTAAGTGAAATAATTGAAACTGACTATTCTTGGAGGATGTTTGGGATAGTGACATGACATTGTCTGCTAGGATTTTATGTTTAAAAAGCATATGTTGGATTAGAGGAATGATCTAACCTCTGCCTCTATTCTAGTTTCTAGATGATTTTCAACCCTCTTCCATCTGAGACTGCAGAATGTAGGTCCTTGATACTTCTGGAATTTGTACATGTCAATTCCTTTATAATAGGGGGACCTGATGAAGATCTCTATGGCAAAATTTGGGTGATAAAACTTCCTTCGGTTGGTCTGTCCAGGAGGTATAAATACTAACGATATTGTTCAAGGAAGGAAAGAAGAGCCAGAACCTTCCTGGATCCCATTTTGGGGTGGGGGTCACGCGACCCCCCCCCCCCCCCCCCAAGAAAAAAAGGAAAAAATAATATTTGGAATTTACTTTATCCCTTTATAGCCTTCATCTTTCAGCTATTGGGAAGTCATTTTTTCCAAAGGGAAGAAAAAGGCTTCTCTGGTGTTGTGGATTAAAAGCAAATAAGAGATTTTCAAGATGTTTAATGCTTTCTCTCTCTCTTTGTAGTCTCATATTGTACTTCCTTTCCATTGCCTTTTTCACTTTTTCTAACGACCCTACTATGATTTTAGCCCCTTAAGGAGGCATTTTGTTACCTACCACTTTGCTTTGTTGGGGCGTTGCTTTCTATATATATTTCATTAATCAATGAAATTTGTTTTTGTCTTTAATTTTTTAAAACCTGACTACTTTTGGAGGAGATTGGGAATGTGGGCCTCACTGGAAGAGTGATCTATAATACTAGCACAAGAGGCAAGTGGTGGACCAGTGGCTTGAATACAGGGGGATGAAGATAAATCTCTGAATTATTAAGATTTCAACTTATTAGAGTGAGTGGTCCACTTGAGACTAGTTCCAAAAAAGAAATCCATTTACTCAAGGAAAGAAGATTTCATATGGATGATTGGAAGACAATAAGGATCCGTGTATAAAGTTGTACCAGCAAACTCTGGCACCAAGTTTTGAGGTTACCATCTCTGTTAACAAGATTTAACGAACTTTGAAAGAAACGATAAGCTTGTAGACATTTGTTTTACTCTAATATTTTCGTCTAACAATTGTCTCCACTGAATGCTACTAAGAACATCTATTGATCTATGCATGCAAAAGGTAAGCAGAAACCCAACACTGGAACAATATAAAAGAGACCACATTGTGATGAGGGAGCAAAGCAAGAGTGAATGATGAGAATGGTGGAGAACCTAGTCAATTACTTGGAATTTTGATTCTCATGCAAACTTTTATATGAAACTGATGGAGAATTTTGACTTTTTTCTTGTGAGGGTTGTTGCATGGATAGTGACACATTTTTGTCGCCTATATTCATTGATGCTTTCAGTGTCCCTTTTGCTTTCTTGTATTTAATGGAAGAGTAGAATGATGTGGTTTATATTTGAAATGGGCCTGCAGGATTGCAGCTGTTTTTAGATTTTTCATTATGCAAATTAGATGCATTGTTCCCATCAAAACATAAATAAAAATTTGATCATCCCACAAGTTTAGAAAAGACTTATTCTTTTAGATATTTCTATTACGGTTCTCTCTCGTTGTAAATTGTATGGCTCAGTCCCTGCCCCTTCAACAGCTATAGTTGGAATTGGAATGTTTGTTGTACCGACTGGAAGAACTCTATGTAATCCTTTTTGGCTTGGGGTTGGCTTTCTTCTCCCTCTTTTATTTCCTCCTCCTGTAATTTCAGGTTATCTATGAAATTTGTTGATTTCTAAAATAATGATTGCCCCTTTGTATCAGTATAGATTTATACTTCTCTATTTGGGTTGGTTACATATATTATATATAATGATGAACAAGATATGAATCTGGAAAATTGACCATTCCATGTTTTCTCCAGGGGGCTCAATAAATCTACTCGGCAGAAGAAAATCGATGCCTATGCTGCCATGGTAAAGTGGTGAAAGTTCTCATATTTATGAGCATTGGATGATAAATGCAGCAATGCATATCAGGTGCATATCTTTTTACCCATAATTTTCTCAAATTTTACTTTCTTTATTTTGATGCAGATGGTACTCGAGAGATACTTTTCCATGTCAGGCCAGGGAACTGAACTTGTAGTGCCTAAGAGTCTAGTCTTACAAGAAAAACTTATTGAGGGACCACCAACAGATCCGGACTTTAAGGATTGA ATGTCAATGTGTGCGCTACATTTCAAACCATTTCCGCTGCAAAGCCACATCCTCAGCAACCACAATCTTCGCTCTCCGACGATACTCTGGTTTCCAAACCTAATCTGCAAATGCGTTCCCGAAACAAGGGCGATTTCCGCCGTTGAACTTCCTCCCAATGCCCTTCGCCGCAAGCTCGACCCTCACTGGAGAGGAGGTTTCAGTCTAGGCGTCGACCTCGGAGCGTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCTACTCGTCCTCTCACCGTTTTGGAGTTGCGAGGACAAAAGCTTGAAGTTAAGCTTATTGAGATTGCTGAACAGGAGGAAGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGACGGAAAAGAGACACCTCAATCGAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCTCGAGCAGCTGAAAGGGGTTGGAGGGTTTACTTGCATGATGAACATGGGACAACTGAAGATGCGGAAAGCCATATGATTTCCAGACAAGTTCTGGAACCAATTCCTAAGGATTTATGGGGCCTGGACTTTTCCAAGAGCATTGGGATGCTATCATCCATTTTTTGTGTTATAAACTTGTTGACCGAAGCTCTTACTTTATCTGCAACTTCCTACAGGAAGCCCCCCATTATCTTCTCCACCTTTGTTACTTTACTGACGGAGGAAGGGATCTTAAATAAAGAAAGGAATGCCTTGAAAAGATTCAGAGAGTTAGGAATCATGAACAGGATCAACATGGAGGAAAACACAGAATATGACTGCATTACAGAGACATGGGGACCTGATGAAGATCTCTATGGCAAAATTTGGGTGATAAAACTTCCTTCGGTTGGTCTGTCCAGGAGGGGGCTCAATAAATCTACTCGGCAGAAGAAAATCGATGCCTATGCTGCCATGATGGTACTCGAGAGATACTTTTCCATGTCAGGCCAGGGAACTGAACTTGTAGTGCCTAAGAGTCTAGTCTTACAAGAAAAACTTATTGAGGGACCACCAACAGATCCGGACTTTAAGGATTGA ATGTCAATGTGTGCGCTACATTTCAAACCATTTCCGCTGCAAAGCCACATCCTCAGCAACCACAATCTTCGCTCTCCGACGATACTCTGGTTTCCAAACCTAATCTGCAAATGCGTTCCCGAAACAAGGGCGATTTCCGCCGTTGAACTTCCTCCCAATGCCCTTCGCCGCAAGCTCGACCCTCACTGGAGAGGAGGTTTCAGTCTAGGCGTCGACCTCGGAGCGTCTCGCACTGGACTTGCTCTTAGTAAAGGCTTCTCTACTCGTCCTCTCACCGTTTTGGAGTTGCGAGGACAAAAGCTTGAAGTTAAGCTTATTGAGATTGCTGAACAGGAGGAAGCTGATGAATTTATTATTGGACTTCCTAAATCATGCGACGGAAAAGAGACACCTCAATCGAACAAAATTCGTAGTATTGCCGGAAGGGTGGCAGCTCGAGCAGCTGAAAGGGGTTGGAGGGTTTACTTGCATGATGAACATGGGACAACTGAAGATGCGGAAAGCCATATGATTTCCAGACAAGTTCTGGAACCAATTCCTAAGGATTTATGGGGCCTGGACTTTTCCAAGAGCATTGGGATGCTATCATCCATTTTTTGTGTTATAAACTTGTTGACCGAAGCTCTTACTTTATCTGCAACTTCCTACAGGAAGCCCCCCATTATCTTCTCCACCTTTGTTACTTTACTGACGGAGGAAGGGATCTTAAATAAAGAAAGGAATGCCTTGAAAAGATTCAGAGAGTTAGGAATCATGAACAGGATCAACATGGAGGAAAACACAGAATATGACTGCATTACAGAGACATGGGGACCTGATGAAGATCTCTATGGCAAAATTTGGGTGATAAAACTTCCTTCGGTTGGTCTGTCCAGGAGGGGGCTCAATAAATCTACTCGGCAGAAGAAAATCGATGCCTATGCTGCCATGATGGTACTCGAGAGATACTTTTCCATGTCAGGCCAGGGAACTGAACTTGTAGTGCCTAAGAGTCTAGTCTTACAAGAAAAACTTATTGAGGGACCACCAACAGATCCGGACTTTAAGGATTGA MSMCALHFKPFPLQSHILSNHNLRSPTILWFPNLICKCVPETRAISAVELPPNALRRKLDPHWRGGFSLGVDLGASRTGLALSKGFSTRPLTVLELRGQKLEVKLIEIAEQEEADEFIIGLPKSCDGKETPQSNKIRSIAGRVAARAAERGWRVYLHDEHGTTEDAESHMISRQVLEPIPKDLWGLDFSKSIGMLSSIFCVINLLTEALTLSATSYRKPPIIFSTFVTLLTEEGILNKERNALKRFRELGIMNRINMEENTEYDCITETWGPDEDLYGKIWVIKLPSVGLSRRGLNKSTRQKKIDAYAAMMVLERYFSMSGQGTELVVPKSLVLQEKLIEGPPTDPDFKD Homology
BLAST of Lag0020583 vs. NCBI nr
Match: XP_022144406.1 (uncharacterized protein LOC111014097 isoform X1 [Momordica charantia]) HSP 1 Score: 343.6 bits (880), Expect = 2.0e-90 Identity = 200/356 (56.18%), Postives = 209/356 (58.71%), Query Frame = 0
BLAST of Lag0020583 vs. NCBI nr
Match: XP_022979278.1 (uncharacterized protein LOC111479048 [Cucurbita maxima]) HSP 1 Score: 327.0 bits (837), Expect = 2.0e-85 Identity = 195/355 (54.93%), Postives = 204/355 (57.46%), Query Frame = 0
BLAST of Lag0020583 vs. NCBI nr
Match: XP_023528266.1 (uncharacterized protein LOC111791236 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 324.3 bits (830), Expect = 1.3e-84 Identity = 194/355 (54.65%), Postives = 203/355 (57.18%), Query Frame = 0
BLAST of Lag0020583 vs. NCBI nr
Match: KAG6582728.1 (hypothetical protein SDJN03_22730, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020681.1 yqgF [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 323.2 bits (827), Expect = 2.8e-84 Identity = 193/355 (54.37%), Postives = 202/355 (56.90%), Query Frame = 0
BLAST of Lag0020583 vs. NCBI nr
Match: XP_022924794.1 (uncharacterized protein LOC111432185 [Cucurbita moschata]) HSP 1 Score: 321.6 bits (823), Expect = 8.2e-84 Identity = 193/355 (54.37%), Postives = 202/355 (56.90%), Query Frame = 0
BLAST of Lag0020583 vs. ExPASy Swiss-Prot
Match: A1SJC8 (Putative pre-16S rRNA nuclease OS=Nocardioides sp. (strain ATCC BAA-499 / JS614) OX=196162 GN=Noca_2408 PE=3 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 2.6e-08 Identity = 44/111 (39.64%), Postives = 61/111 (54.95%), Query Frame = 0
BLAST of Lag0020583 vs. ExPASy Swiss-Prot
Match: B8DIJ5 (Putative pre-16S rRNA nuclease OS=Desulfovibrio vulgaris (strain DSM 19637 / Miyazaki F) OX=883 GN=DvMF_2352 PE=3 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 3.6e-05 Identity = 35/118 (29.66%), Postives = 62/118 (52.54%), Query Frame = 0
BLAST of Lag0020583 vs. ExPASy Swiss-Prot
Match: B8EPC5 (Putative pre-16S rRNA nuclease OS=Methylocella silvestris (strain DSM 15510 / CIP 108128 / LMG 27833 / NCIMB 13906 / BL2) OX=395965 GN=Msil_0742 PE=3 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 7.9e-05 Identity = 29/80 (36.25%), Postives = 46/80 (57.50%), Query Frame = 0
BLAST of Lag0020583 vs. ExPASy Swiss-Prot
Match: Q2G9X2 (Putative pre-16S rRNA nuclease OS=Novosphingobium aromaticivorans (strain ATCC 700278 / DSM 12444 / CCUG 56034 / CIP 105152 / NBRC 16084 / F199) OX=279238 GN=Saro_0906 PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04 Identity = 33/112 (29.46%), Postives = 54/112 (48.21%), Query Frame = 0
BLAST of Lag0020583 vs. ExPASy Swiss-Prot
Match: A5D3C3 (Putative pre-16S rRNA nuclease OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) OX=370438 GN=PTH_1065 PE=3 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 3.0e-04 Identity = 32/107 (29.91%), Postives = 59/107 (55.14%), Query Frame = 0
BLAST of Lag0020583 vs. ExPASy TrEMBL
Match: A0A6J1CTB8 (uncharacterized protein LOC111014097 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014097 PE=3 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 9.8e-91 Identity = 200/356 (56.18%), Postives = 209/356 (58.71%), Query Frame = 0
BLAST of Lag0020583 vs. ExPASy TrEMBL
Match: A0A6J1IVR0 (uncharacterized protein LOC111479048 OS=Cucurbita maxima OX=3661 GN=LOC111479048 PE=3 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 9.5e-86 Identity = 195/355 (54.93%), Postives = 204/355 (57.46%), Query Frame = 0
BLAST of Lag0020583 vs. ExPASy TrEMBL
Match: A0A6J1EA74 (uncharacterized protein LOC111432185 OS=Cucurbita moschata OX=3662 GN=LOC111432185 PE=3 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 4.0e-84 Identity = 193/355 (54.37%), Postives = 202/355 (56.90%), Query Frame = 0
BLAST of Lag0020583 vs. ExPASy TrEMBL
Match: A0A0A0L3L5 (YqgFc domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G116900 PE=3 SV=1) HSP 1 Score: 308.1 bits (788), Expect = 4.6e-80 Identity = 189/343 (55.10%), Postives = 199/343 (58.02%), Query Frame = 0
BLAST of Lag0020583 vs. ExPASy TrEMBL
Match: A0A1S3AUT7 (uncharacterized protein LOC103483114 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103483114 PE=3 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 6.6e-79 Identity = 182/340 (53.53%), Postives = 192/340 (56.47%), Query Frame = 0
BLAST of Lag0020583 vs. TAIR 10
Match: AT1G12244.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein ) HSP 1 Score: 209.9 bits (533), Expect = 3.3e-54 Identity = 124/300 (41.33%), Postives = 152/300 (50.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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