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Lag0020575 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCTCTGATCCTTTACGACGACAACATCCCTGTTACCGTATGCTTCTTCTCTTAAATCCTGTCATCCTTAATATTTAATTTCTTTCTTCGTAGTTGCTTTTGGGATCTCGTTTACCAATTTCAAAGTACTTAGTAGGGAGATTGACGTGTTTTATTCAAAGTGATTGGTGTAAGTATTAGTAATATCAACATTTCGCGTGATTCCCATTTTAAATAGTTCAAATACGAAACGTGGAGTATCAAACTCTTGTTCGGTCTTTGTCTTTTTTCTTCATATATATTTATTAAACAATGCCTAAAAGCTAGATCTTGTTCTTCTTTTATCACTACTTTTCCGGTATGTTTATGTAATTTATTCCAATTTGTGATTATTGTTTTTGCTTATGAACTTCTGTGATAACGTTTGCTATATGATTTGTATGGGAATAAGATTCGAAAATGTGTTTTCTTAAACAGTCAGAGAAGCTTGCCACGCTTGTTAACGCAGCTAAGGTGCCCAATGTGGAGTCCTACTGGTTCGGCCTTTTTGCTAAGCTGGCTGAGAAGCGTAACATTGGGGATTTGATCCTGAATGTTGGGGCTGGTGGAGGTGCCCCAGTCGCTGCTGCTGCCCCAGTTGGTGGAGCTGCGGGTGGGGCTGCTGCCGCAGCTGCTCCTCCGCCAGAAGAGAAAAAGGTAAGCAATGGCCATTTCATTTCTAAAAATGACATTGTTGTCTTTCTTTCTTATCATGAGAGCTTGGTTAGTAGGTAGTTAATGTTCATCATTGTTACATGTGTTTATTTTTGTCACTTGCAGGAAGAACCCAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAA ATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCTCTGATCCTTTACGACGACAACATCCCTGTTACCTCAGAGAAGCTTGCCACGCTTGTTAACGCAGCTAAGGTGCCCAATGTGGAGTCCTACTGGTTCGGCCTTTTTGCTAAGCTGGCTGAGAAGCGTAACATTGGGGATTTGATCCTGAATGTTGGGGCTGGTGGAGGTGCCCCAGTCGCTGCTGCTGCCCCAGTTGGTGGAGCTGCGGGTGGGGCTGCTGCCGCAGCTGCTCCTCCGCCAGAAGAGAAAAAGGAAGAACCCAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAA ATGTCGACCGGAGAAATTGCTTGCTCCTACGCTGCTCTGATCCTTTACGACGACAACATCCCTGTTACCTCAGAGAAGCTTGCCACGCTTGTTAACGCAGCTAAGGTGCCCAATGTGGAGTCCTACTGGTTCGGCCTTTTTGCTAAGCTGGCTGAGAAGCGTAACATTGGGGATTTGATCCTGAATGTTGGGGCTGGTGGAGGTGCCCCAGTCGCTGCTGCTGCCCCAGTTGGTGGAGCTGCGGGTGGGGCTGCTGCCGCAGCTGCTCCTCCGCCAGAAGAGAAAAAGGAAGAACCCAAGGAAGAGAGTGACGATGATATGGGATTCAGTTTGTTCGATTAA MSTGEIACSYAALILYDDNIPVTSEKLATLVNAAKVPNVESYWFGLFAKLAEKRNIGDLILNVGAGGGAPVAAAAPVGGAAGGAAAAAAPPPEEKKEEPKEESDDDMGFSLFD Homology
BLAST of Lag0020575 vs. NCBI nr
Match: XP_004133766.1 (60S acidic ribosomal protein P1 [Cucumis sativus] >KGN56349.1 hypothetical protein Csa_009966 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 6.4e-46 Identity = 102/113 (90.27%), Postives = 108/113 (95.58%), Query Frame = 0
BLAST of Lag0020575 vs. NCBI nr
Match: XP_038883955.1 (60S acidic ribosomal protein P1-like [Benincasa hispida]) HSP 1 Score: 193.7 bits (491), Expect = 8.4e-46 Identity = 101/113 (89.38%), Postives = 106/113 (93.81%), Query Frame = 0
BLAST of Lag0020575 vs. NCBI nr
Match: XP_008437779.1 (PREDICTED: 60S acidic ribosomal protein P1-like [Cucumis melo] >KAA0048820.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa] >TYK20773.1 60S acidic ribosomal protein P1-like [Cucumis melo var. makuwa]) HSP 1 Score: 188.0 bits (476), Expect = 4.6e-44 Identity = 99/113 (87.61%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of Lag0020575 vs. NCBI nr
Match: XP_022980127.1 (60S acidic ribosomal protein P1-like [Cucurbita maxima]) HSP 1 Score: 183.3 bits (464), Expect = 1.1e-42 Identity = 101/113 (89.38%), Postives = 104/113 (92.04%), Query Frame = 0
BLAST of Lag0020575 vs. NCBI nr
Match: XP_022974253.1 (60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_022975257.1 60S acidic ribosomal protein P1-like [Cucurbita maxima] >XP_023538866.1 60S acidic ribosomal protein P1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 179.1 bits (453), Expect = 2.1e-41 Identity = 100/113 (88.50%), Postives = 103/113 (91.15%), Query Frame = 0
BLAST of Lag0020575 vs. ExPASy Swiss-Prot
Match: P52855 (60S acidic ribosomal protein P1 OS=Zea mays OX=4577 GN=RPP1A PE=1 SV=1) HSP 1 Score: 140.6 bits (353), Expect = 1.1e-32 Identity = 83/114 (72.81%), Postives = 94/114 (82.46%), Query Frame = 0
BLAST of Lag0020575 vs. ExPASy Swiss-Prot
Match: O23095 (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana OX=3702 GN=RPP1B PE=1 SV=2) HSP 1 Score: 129.4 bits (324), Expect = 2.5e-29 Identity = 79/117 (67.52%), Postives = 92/117 (78.63%), Query Frame = 0
BLAST of Lag0020575 vs. ExPASy Swiss-Prot
Match: Q8LEQ0 (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana OX=3702 GN=RPP1C PE=1 SV=2) HSP 1 Score: 127.5 bits (319), Expect = 9.7e-29 Identity = 80/117 (68.38%), Postives = 93/117 (79.49%), Query Frame = 0
BLAST of Lag0020575 vs. ExPASy Swiss-Prot
Match: Q8LCW9 (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana OX=3702 GN=RPP1A PE=3 SV=2) HSP 1 Score: 125.9 bits (315), Expect = 2.8e-28 Identity = 77/116 (66.38%), Postives = 92/116 (79.31%), Query Frame = 0
BLAST of Lag0020575 vs. ExPASy Swiss-Prot
Match: Q9HGV0 (60S acidic ribosomal protein P1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=AFUA_1G06830 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 5.9e-26 Identity = 71/114 (62.28%), Postives = 84/114 (73.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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