Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCATGAAATTAGCGGCTGCTCTTTTGGTTCTTCTGGTGGCCGTGCGCGCGGTTTATGGAGCAGATATCATCGTTGGCGGCAGCTCTGGCTGGAATCAGGGGTTTGATTACGATACCTGGGTTGCAGGACAAACTATTAGAGTTGGCGACTCATTAGGTAACTTTGTACAATATGAAAACAGAGTATTAATTTCGGAAACGAGAAATTAAAATTAAAAGAAGAGAAAGTGGTTGATCTTGATCTGATTTGAAATTTGTAACATGGCAGTGTTCAATTACGCTGGGAATCACGCAGTGGACGAGGTGAATGAGCAAGACTACAACGCATGCTCGTCGAGCTCGGTGATCAAATCCCACACAGGCGGAAGCACGTCCATTCCTCTGACAGCGACAGGGCCAAGGTACTTCATCTGTCCCACTGCCGGTCACTGTGCCTCCGGCATGAAGCTTCGGGTCAACGTTCTGGCGGCCAGCGGCACCCCAAGCCCACCGAGCCCAACTCCACCGGCCAACACCCCACCGAGCCCAACTCCACCGGCCAACACACCCCCGAGCCCAACTCCTCCGTCTCCGAGCGCAGCCGCCCCTGCTTTCTTGAATCTCAACCACTTGATCTTTGGAGCTTCCGTTGCCTTCTTCGCCACCCTGTTTGTGCTATGA
mRNA sequence
ATGGCCATGAAATTAGCGGCTGCTCTTTTGGTTCTTCTGGTGGCCGTGCGCGCGGTTTATGGAGCAGATATCATCGTTGGCGGCAGCTCTGGCTGGAATCAGGGGTTTGATTACGATACCTGGGTTGCAGGACAAACTATTAGAGTTGGCGACTCATTAGTGTTCAATTACGCTGGGAATCACGCAGTGGACGAGGTGAATGAGCAAGACTACAACGCATGCTCGTCGAGCTCGGTGATCAAATCCCACACAGGCGGAAGCACGTCCATTCCTCTGACAGCGACAGGGCCAAGGTACTTCATCTGTCCCACTGCCGGTCACTGTGCCTCCGGCATGAAGCTTCGGGTCAACGTTCTGGCGGCCAGCGGCACCCCAAGCCCACCGAGCCCAACTCCACCGGCCAACACCCCACCGAGCCCAACTCCACCGGCCAACACACCCCCGAGCCCAACTCCTCCGTCTCCGAGCGCAGCCGCCCCTGCTTTCTTGAATCTCAACCACTTGATCTTTGGAGCTTCCGTTGCCTTCTTCGCCACCCTGTTTGTGCTATGA
Coding sequence (CDS)
ATGGCCATGAAATTAGCGGCTGCTCTTTTGGTTCTTCTGGTGGCCGTGCGCGCGGTTTATGGAGCAGATATCATCGTTGGCGGCAGCTCTGGCTGGAATCAGGGGTTTGATTACGATACCTGGGTTGCAGGACAAACTATTAGAGTTGGCGACTCATTAGTGTTCAATTACGCTGGGAATCACGCAGTGGACGAGGTGAATGAGCAAGACTACAACGCATGCTCGTCGAGCTCGGTGATCAAATCCCACACAGGCGGAAGCACGTCCATTCCTCTGACAGCGACAGGGCCAAGGTACTTCATCTGTCCCACTGCCGGTCACTGTGCCTCCGGCATGAAGCTTCGGGTCAACGTTCTGGCGGCCAGCGGCACCCCAAGCCCACCGAGCCCAACTCCACCGGCCAACACCCCACCGAGCCCAACTCCACCGGCCAACACACCCCCGAGCCCAACTCCTCCGTCTCCGAGCGCAGCCGCCCCTGCTTTCTTGAATCTCAACCACTTGATCTTTGGAGCTTCCGTTGCCTTCTTCGCCACCCTGTTTGTGCTATGA
Protein sequence
MAMKLAAALLVLLVAVRAVYGADIIVGGSSGWNQGFDYDTWVAGQTIRVGDSLVFNYAGNHAVDEVNEQDYNACSSSSVIKSHTGGSTSIPLTATGPRYFICPTAGHCASGMKLRVNVLAASGTPSPPSPTPPANTPPSPTPPANTPPSPTPPSPSAAAPAFLNLNHLIFGASVAFFATLFVL
Homology
BLAST of Lag0020570 vs. NCBI nr
Match:
KAG6597011.1 (hypothetical protein SDJN03_10191, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 249.2 bits (635), Expect = 2.7e-62
Identity = 133/183 (72.68%), Postives = 156/183 (85.25%), Query Frame = 0
Query: 1 MAMKLAAALLVLLVAVRAVYGADIIVGGSSGWNQGFDYDTWVAGQTIRVGDSLVFNYAGN 60
M MK+ A + V LVAVRAVYGADI+VGG SGW+QGFDYDTW AGQT +VGDSLVFNY G+
Sbjct: 23 MVMKV-AVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQTFKVGDSLVFNYGGS 82
Query: 61 HAVDEVNEQDYNACSSSSVIKSHTGGSTSIPLTATGPRYFICPTAGHCASGMKLRVNVLA 120
H+V EVNE Y ACSS+SVI+SHTGGSTSIPL+ATGPRYF+CPT GHC+SGMKL++NV+A
Sbjct: 83 HSVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVA 142
Query: 121 ASGTPSPPSPTPPANTPPSPTPPANTPPSPTPPSPSAAAPAFLNLNHLIFGASVAFFATL 180
A+ TP+PP TPP NTPP+ TPPA+TPPS PPSPSA + AF++LN LI GAS+A FA L
Sbjct: 143 ANATPTPPGTTPPGNTPPANTPPADTPPS--PPSPSAGSSAFISLNQLISGASIACFAAL 202
Query: 181 FVL 184
FVL
Sbjct: 203 FVL 202
BLAST of Lag0020570 vs. NCBI nr
Match:
XP_022974245.1 (uclacyanin-3-like [Cucurbita maxima])
HSP 1 Score: 248.4 bits (633), Expect = 4.6e-62
Identity = 132/183 (72.13%), Postives = 154/183 (84.15%), Query Frame = 0
Query: 1 MAMKLAAALLVLLVAVRAVYGADIIVGGSSGWNQGFDYDTWVAGQTIRVGDSLVFNYAGN 60
M MK+ A + V LVAVRAVYGADI+VGG SGWNQGFDY TW AGQ +VGDSLVFNY G+
Sbjct: 1 MVMKV-AVVFVFLVAVRAVYGADIVVGGDSGWNQGFDYGTWAAGQVFKVGDSLVFNYGGS 60
Query: 61 HAVDEVNEQDYNACSSSSVIKSHTGGSTSIPLTATGPRYFICPTAGHCASGMKLRVNVLA 120
H+V EVNE Y ACSS+SVI+SHTGGSTSIPL+ATGPRYF+CPT GHC+SGMKL++NV+A
Sbjct: 61 HSVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVA 120
Query: 121 ASGTPSPPSPTPPANTPPSPTPPANTPPSPTPPSPSAAAPAFLNLNHLIFGASVAFFATL 180
A+ TP+PP TPPANTPP+ TPPA+TPPS PPSPSA + F++LN LIFGAS+A F L
Sbjct: 121 ANATPTPPGTTPPANTPPADTPPADTPPS--PPSPSAGSSGFISLNQLIFGASIACFTAL 180
Query: 181 FVL 184
FVL
Sbjct: 181 FVL 180
BLAST of Lag0020570 vs. NCBI nr
Match:
KAG7028487.1 (hypothetical protein SDJN02_09668 [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 247.3 bits (630), Expect = 1.0e-61
Identity = 132/183 (72.13%), Postives = 155/183 (84.70%), Query Frame = 0
Query: 1 MAMKLAAALLVLLVAVRAVYGADIIVGGSSGWNQGFDYDTWVAGQTIRVGDSLVFNYAGN 60
M MK+ A + V LVAVRAVYGADI+VGG SGW+QGFDYDTW AGQ +VGDSLVFNY G+
Sbjct: 1 MVMKV-AVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGS 60
Query: 61 HAVDEVNEQDYNACSSSSVIKSHTGGSTSIPLTATGPRYFICPTAGHCASGMKLRVNVLA 120
H+V EVNE Y ACSS+SVI+SHTGGSTSIPL+ATGPRYF+CPT GHC+SGMKL++NV+A
Sbjct: 61 HSVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVA 120
Query: 121 ASGTPSPPSPTPPANTPPSPTPPANTPPSPTPPSPSAAAPAFLNLNHLIFGASVAFFATL 180
A+ TP+PP TPP NTPP+ TPPA+TPPS PPSPSA + AF++LN LI GAS+A FA L
Sbjct: 121 ANATPTPPGTTPPGNTPPANTPPADTPPS--PPSPSAGSSAFISLNQLISGASIACFAAL 180
Query: 181 FVL 184
FVL
Sbjct: 181 FVL 180
BLAST of Lag0020570 vs. NCBI nr
Match:
XP_022975259.1 (uclacyanin-3-like [Cucurbita maxima])
HSP 1 Score: 246.5 bits (628), Expect = 1.8e-61
Identity = 131/183 (71.58%), Postives = 154/183 (84.15%), Query Frame = 0
Query: 1 MAMKLAAALLVLLVAVRAVYGADIIVGGSSGWNQGFDYDTWVAGQTIRVGDSLVFNYAGN 60
M MK+ A + V LVAVRAVYGADI+VGG SGW+QGFDY TW AGQ +VGDSLVFNY G+
Sbjct: 1 MVMKV-AVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYGTWAAGQVFKVGDSLVFNYGGS 60
Query: 61 HAVDEVNEQDYNACSSSSVIKSHTGGSTSIPLTATGPRYFICPTAGHCASGMKLRVNVLA 120
H+V EVNE Y ACSS+SVI+SHTGGSTSIPL+ATGPRYF+CPT GHC+SGMKL++NV+A
Sbjct: 61 HSVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVA 120
Query: 121 ASGTPSPPSPTPPANTPPSPTPPANTPPSPTPPSPSAAAPAFLNLNHLIFGASVAFFATL 180
A+ TP+PP TPPANTPP+ TPPA+TPPS PPSPSA + F++LN LIFGAS+A F L
Sbjct: 121 ANATPTPPGTTPPANTPPADTPPADTPPS--PPSPSAGSSGFISLNQLIFGASIACFTAL 180
Query: 181 FVL 184
FVL
Sbjct: 181 FVL 180
BLAST of Lag0020570 vs. NCBI nr
Match:
XP_023540572.1 (mavicyanin-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 245.4 bits (625), Expect = 3.9e-61
Identity = 131/183 (71.58%), Postives = 155/183 (84.70%), Query Frame = 0
Query: 1 MAMKLAAALLVLLVAVRAVYGADIIVGGSSGWNQGFDYDTWVAGQTIRVGDSLVFNYAGN 60
M MK+ A + V LVAVRAVYGADI+VGG SGW+QGFDYDTW AGQ +VGDSLVFNY G+
Sbjct: 1 MVMKV-AVVFVFLVAVRAVYGADIVVGGDSGWSQGFDYDTWAAGQAFKVGDSLVFNYGGS 60
Query: 61 HAVDEVNEQDYNACSSSSVIKSHTGGSTSIPLTATGPRYFICPTAGHCASGMKLRVNVLA 120
H+V EVNE Y ACSS+SVI+SHTGGSTSIPL+ATGPRYF+CPT GHC+SGMKL++NV+A
Sbjct: 61 HSVAEVNEASYKACSSTSVIRSHTGGSTSIPLSATGPRYFLCPTLGHCSSGMKLQINVVA 120
Query: 121 ASGTPSPPSPTPPANTPPSPTPPANTPPSPTPPSPSAAAPAFLNLNHLIFGASVAFFATL 180
A+ TP+PP TPP NTPP+ TPPA+TPPS PSPSA + AF++L+ LIFGAS+A FA L
Sbjct: 121 ANATPTPPGTTPPGNTPPANTPPADTPPS--SPSPSAGSSAFISLSQLIFGASIACFAAL 180
Query: 181 FVL 184
FVL
Sbjct: 181 FVL 180
BLAST of Lag0020570 vs. ExPASy Swiss-Prot
Match:
Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)
HSP 1 Score: 121.7 bits (304), Expect = 8.6e-27
Identity = 74/161 (45.96%), Postives = 100/161 (62.11%), Query Frame = 0
Query: 1 MAMKLAAALLVLLVAVRAVYGADIIVGGSSGWNQGFDYDTWVAGQTIRVGDSLVFNYAGN 60
M +AAALL+ L AV AV+ A VG SGW DY W+ G+T RVGD+L F Y +
Sbjct: 1 MGSTVAAALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLS 60
Query: 61 HAVDEVNEQDYNACSSSSVIKSHTGGSTSIPLTATGPRYFICPTAGHCASGMKLRVNVLA 120
H+V V++ Y+ C SS ++ G T I LT G +F+CPT GHC +GMKL V VLA
Sbjct: 61 HSVSVVDKAGYDNCDSSGATQNFADGDTKIDLTTVGTMHFLCPTFGHCKNGMKLAVPVLA 120
Query: 121 ASGTPSPPS-----PTPPANTPPSPTPPANTPPSPTPPSPS 157
A+ +PS PS P+ P++ P +P+ P++ P P+PPSPS
Sbjct: 121 AAPSPSTPSSPPSTPSTPSSPPSTPSTPSSPPSPPSPPSPS 161
BLAST of Lag0020570 vs. ExPASy Swiss-Prot
Match:
Q41001 (Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 6.0e-20
Identity = 70/164 (42.68%), Postives = 96/164 (58.54%), Query Frame = 0
Query: 5 LAAALLVLLVAVRAVYGADIIVGGSSGWNQGFDYDTWVAGQTIRVGDSLVFNY-AGNHAV 64
L A + + L ++ VY VG +SGW G DY TW + +T VGDSLVFNY AG H V
Sbjct: 12 LLAIINMALPSLATVY----TVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTV 71
Query: 65 DEVNEQDYNACSSSSVIKSHTGGSTSIPLTATGPRYFICPTAGHCASGMKLRVNVLAASG 124
DEV E DY +C+S + I + + G+T+IPL G YFIC GH GMKL + V A+SG
Sbjct: 72 DEVKESDYKSCTSGNSISTDSTGATTIPLKKAGKHYFICGVPGHSTGGMKLSIKVKASSG 131
Query: 125 TPSPPSPTPPAN---TPPSPTPPANTPPSPTPPSPSAAAPAFLN 165
+ + PS TP ++ +P S PA T + TP + ++ L+
Sbjct: 132 SSAAPSATPSSSGKGSPSSDDTPAATTTTTTPTKQNESSATSLS 171
BLAST of Lag0020570 vs. ExPASy Swiss-Prot
Match:
O82081 (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)
HSP 1 Score: 86.7 bits (213), Expect = 3.1e-16
Identity = 69/167 (41.32%), Postives = 93/167 (55.69%), Query Frame = 0
Query: 5 LAAALLVLLVAVRAVYGADIIVGGSSGWNQGFDYDTWVAGQTIRVGDSLVFNY-AGNHAV 64
LA L+ L VA D +GG SGW G TW AGQT VGD+LVF+Y A H V
Sbjct: 13 LATTLIGLTVA------TDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYPAAFHDV 72
Query: 65 DEVNEQDYNACSSSSVIKSHTGGSTSIPLTATGPRYFICPTAGHCASGMKLRVNVLAASG 124
EV + ++++C + + + G++ +PLT G RYFIC GHC+ GMKL VNV+ +
Sbjct: 73 VEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVNVV-PTA 132
Query: 125 TPSPPSPTPPANTPPS---PTPPANTPPSPTPP-------SPSAAAP 161
T +P +P P NT PS P+P + P P P SPS++ P
Sbjct: 133 TVAPTAPLP--NTVPSLNAPSPSSVLPIQPLLPLNPVPVLSPSSSTP 170
BLAST of Lag0020570 vs. ExPASy Swiss-Prot
Match:
P29602 (Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3)
HSP 1 Score: 72.0 bits (175), Expect = 7.8e-12
Identity = 57/141 (40.43%), Postives = 78/141 (55.32%), Query Frame = 0
Query: 25 IVGGSSGWNQGFD---YDTWVAGQTIRVGDSLVFNYAGN-HAVDEV-NEQDYNACSSSSV 84
IVG ++GW+ Y W AG+T RVGDSL FN+ N H V E+ +Q ++AC +
Sbjct: 6 IVGDNTGWSVPSSPNFYSQWAAGKTFRVGDSLQFNFPANAHNVHEMETKQSFDAC---NF 65
Query: 85 IKSHTGGSTSIP----LTATGPRYFICPTAGHCASGMKLRVNVLAASGTPSPPSPTPPAN 144
+ S + P L G YF+C HC++G KL +NV+AA+ T S P PP++
Sbjct: 66 VNSDNDVERTSPVIERLDELGMHYFVCTVGTHCSNGQKLSINVVAANATVSMP---PPSS 125
Query: 145 TPPSPTPPANTPPSPTPPSPS 157
+PPS P PP PPSPS
Sbjct: 126 SPPSSVMP---PPVMPPPSPS 137
BLAST of Lag0020570 vs. ExPASy Swiss-Prot
Match:
Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)
HSP 1 Score: 68.6 bits (166), Expect = 8.6e-11
Identity = 57/143 (39.86%), Postives = 80/143 (55.94%), Query Frame = 0
Query: 26 VGGSSGW--NQGFDYDTWVAGQTIRVGDSLVFNYA-GNHAVDEVNEQDYNACSSSSVIKS 85
VGGS W N +Y++W V D+L F+YA G +V EVN+ DY+AC++ + IK
Sbjct: 33 VGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVLEVNKADYDACNTKNPIKR 92
Query: 86 HTGGSTSIPLTATGPRYFICPTAGHCASGMKLRVNVLAA---SGTPSPPSPTPPANTPPS 145
G + I L GP YFI +C G KL V V++A S SP + P ++TP S
Sbjct: 93 VDDGDSEISLDRYGPFYFISGNEDNCKKGQKLNVVVISARIPSTAQSPHAAAPGSSTPGS 152
Query: 146 PTPP--ANTPPSPTPPSPSAAAP 161
TPP A++P S +P SP+ + P
Sbjct: 153 MTPPGGAHSPKSSSPVSPTTSPP 175
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q96316 | 8.6e-27 | 45.96 | Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1 | [more] |
Q41001 | 6.0e-20 | 42.68 | Blue copper protein OS=Pisum sativum OX=3888 PE=2 SV=1 | [more] |
O82081 | 3.1e-16 | 41.32 | Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1 | [more] |
P29602 | 7.8e-12 | 40.43 | Cucumber peeling cupredoxin OS=Cucumis sativus OX=3659 PE=1 SV=3 | [more] |
Q9T076 | 8.6e-11 | 39.86 | Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S... | [more] |