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Lag0020564 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCATTTCTCCCCACCCCTTTCTCCTTCTTCTCGCCATAGCTTCCTACTCCGCCGCTGAATGCCCTCTCAACTTCACCGTCCTCCGCCAATTCTCCCATGGCTCCGCCGTCTCCCGCCCCGATTTCTCAGATGAATGTCAATACATCCGCCTCGGCCTCCGTCTCGTCCTCGCGCAGTACCTGAAACTCACCGGCTCGTTCTTGCCGCCGGTGAACTCTTCCGATTCGTGCTGGGATTCTTACCAGTCGGTCGTTAACGACACCACGAACCCACAAACCCACAAATCGAAGACAACGCTGAAGAAATCCGGCGACATCGTGGGTTTAAGTTGA ATGTCCATTTCTCCCCACCCCTTTCTCCTTCTTCTCGCCATAGCTTCCTACTCCGCCGCTGAATGCCCTCTCAACTTCACCGTCCTCCGCCAATTCTCCCATGGCTCCGCCGTCTCCCGCCCCGATTTCTCAGATGAATGTCAATACATCCGCCTCGGCCTCCGTCTCGTCCTCGCGCAGTACCTGAAACTCACCGGCTCGTTCTTGCCGCCGGTGAACTCTTCCGATTCGTGCTGGGATTCTTACCAGTCGGTCGTTAACGACACCACGAACCCACAAACCCACAAATCGAAGACAACGCTGAAGAAATCCGGCGACATCGTGGGTTTAAGTTGA ATGTCCATTTCTCCCCACCCCTTTCTCCTTCTTCTCGCCATAGCTTCCTACTCCGCCGCTGAATGCCCTCTCAACTTCACCGTCCTCCGCCAATTCTCCCATGGCTCCGCCGTCTCCCGCCCCGATTTCTCAGATGAATGTCAATACATCCGCCTCGGCCTCCGTCTCGTCCTCGCGCAGTACCTGAAACTCACCGGCTCGTTCTTGCCGCCGGTGAACTCTTCCGATTCGTGCTGGGATTCTTACCAGTCGGTCGTTAACGACACCACGAACCCACAAACCCACAAATCGAAGACAACGCTGAAGAAATCCGGCGACATCGTGGGTTTAAGTTGA MSISPHPFLLLLAIASYSAAECPLNFTVLRQFSHGSAVSRPDFSDECQYIRLGLRLVLAQYLKLTGSFLPPVNSSDSCWDSYQSVVNDTTNPQTHKSKTTLKKSGDIVGLS Homology
BLAST of Lag0020564 vs. NCBI nr
Match: XP_023004492.1 (probable LRR receptor-like serine/threonine-protein kinase RKF3 [Cucurbita maxima]) HSP 1 Score: 149.8 bits (377), Expect = 1.4e-32 Identity = 75/95 (78.95%), Postives = 82/95 (86.32%), Query Frame = 0
BLAST of Lag0020564 vs. NCBI nr
Match: XP_022150208.1 (probable LRR receptor-like serine/threonine-protein kinase RKF3 [Momordica charantia]) HSP 1 Score: 149.4 bits (376), Expect = 1.8e-32 Identity = 74/91 (81.32%), Postives = 82/91 (90.11%), Query Frame = 0
BLAST of Lag0020564 vs. NCBI nr
Match: XP_038899058.1 (probable LRR receptor-like serine/threonine-protein kinase RKF3 [Benincasa hispida]) HSP 1 Score: 147.9 bits (372), Expect = 5.2e-32 Identity = 76/96 (79.17%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Lag0020564 vs. NCBI nr
Match: XP_022960466.1 (probable LRR receptor-like serine/threonine-protein kinase RKF3 [Cucurbita moschata]) HSP 1 Score: 143.7 bits (361), Expect = 9.8e-31 Identity = 72/94 (76.60%), Postives = 80/94 (85.11%), Query Frame = 0
BLAST of Lag0020564 vs. NCBI nr
Match: KAG6593145.1 (putative LRR receptor-like serine/threonine-protein kinase RKF3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142.9 bits (359), Expect = 1.7e-30 Identity = 72/96 (75.00%), Postives = 80/96 (83.33%), Query Frame = 0
BLAST of Lag0020564 vs. ExPASy Swiss-Prot
Match: P93050 (Probable LRR receptor-like serine/threonine-protein kinase RKF3 OS=Arabidopsis thaliana OX=3702 GN=RKF3 PE=2 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 1.2e-10 Identity = 35/81 (43.21%), Postives = 50/81 (61.73%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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