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Lag0020554 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAAAGAAAAAGAAACGTCAAGCAAAACTTAGTTTCGTACGCTACACTCTACACTCCTCATCCCGTTGTTCTTCTTCTTCTTCATCTGGGCCTCTCTTTCTCCCCTTCGACTTCACGGCTTTTGCTCACATAATGCATTTGGTACGCTTCTCTTTTCTCCTATACAAATCTATGCCCACCGTTCCTTTTCCAAATCCCTATCGTCCCACTTTTTTATTCTCCATTGGTTTCCTGTTTTTCCCTCCCCTTGTGTTTGCCGTGGTTGATGGCGGAATTTGTTGTGTTTCGTACGCTTACGTTTTTTTTCATTAACTAGGGTTTCAATTTCAAACGTCTGTTGCTTGTCACATACGCGACATATCACTTACGCGGTTACGCCTCATCGTCTGTTGCTTGTCGCCTCTCCTCCCGTGCTTGCCGTCGCCGCCGTCGCCGCCATCGCCCGTGCTTGTGCCGTCGCCGCCATCGCCCGTGCTTGTGCCGTCGCCGACGGTGCTTCCCGTGCTTGCCGTCGGTTTGTTCTCTTCTCTTCGTCTTCTTCCTTAATGTTTTCGTCTTTTTCGACTGCAAACGAATATGAATCAATGGCTTCCTGTATCTCCAACAATGTATTTTACAGGTTGAAGACGATCCCCAACTGTTCATTTGGCTAGAATTGGAACTTCGGCAATCGCAACAAAAAAAAAACCCCAAATCAAATACCACCGATTTCGATCTTCCATTTCCTCTTTCTCTCGTCGACTAGACATTCTTGAAAGGTATTTTTTCAATGGAACCGACGGATTTGTGTTAGCGTTTGTGATTCTGATTTGAATCTTTTGGTTTCGTTAATGGTTATCGGATTCTGTTTCTGTCCGTCACTGCCCTGCCACTGACTTCTTGAATTTCCTCTCCTTAGAACGCTTTGTTTATGCTTTATTGGTGAATGATTTGGAACCGACATTGGAGGTTTAATTCTAAGTTCTAACTGCTAGGTTCGTAATTCAGTTACTTGGAGAAGTTAATTAGGAAATTTCTTGCCTGCTGTTTCTTTGATGATCAAAACAACAACCCACTTATATCAATTATTATGCATATGTTTTTAAAACTTTTCTAATTAATGAGTTGTTGGTTTTAATGTTTCACTCTCTCCTTTGAGAGTTGAGAGTTTGTTCCTGTAATTATTAGTTGTTTGTTACATATACTCTTATCTATTGCACTAAAAGCTCATTCTTAAACCACCACCAACCATTGTATCCCATAAACCCAAAGTTTATTTGATTCAGATACATGACATTGATGAGATTGCTTCCTATCAATATATTAGGCAAATTTAAGACATCTATCCCATCAAGAAGTTGATTTTTCCCATGACTAGCTACAACTTTAGTTGGAGTTTTAAGCATGAGTTTGGTTTATCTTTTATATTAAGCTATTTTCTCCTTAAATATACACAAAAGAAATGCTTTTAATGATGTGTTTCTTTCCATAAACCCAAAGAAATGCTTACATTAATCATCTATAAAGTATGTTTCTTCCTAAAGAGCTTTTAGATCAATCTGAGGTTTTAGCTTTTACTCTACTCCTCCTTTTCCATTTCTGTATGTTGTGCAGATATGTGACATGGTTGCCATTGCAAAATGTTTAAATGTCACTCTTATAGTACCCGAATTGGATAAGACCTCATTCTGGGTTGATCCCAAATGTGTTAGTTTTCGTTCCATTTTCACTCTTATAGTACCCGAAATAGAAGAATTGACAAGAATGAGGTGATGTTTACTTATTTCTATTTTAGTCGGTTGTCATTGCGGTATTTTGGAAAACTCTTTCTCATTCCCTTTTTCTCTCACTTTATACATGCAAATATGCATATCCCTGGTGGAAAGAGAAAGTAATAGACTTGGACCTGAAAAGGAAGGATGGGCTGTGCCCCTTGACCCCAGAAGAAACTGCACTTAGTATGAAAAATAGTGGAGATTTTGTGAAGAAGTTAAAAGAAGATGGTTATGAAAATTAG ATGCCAAAGAAAAAGAAACGTCAAGCAAAACTTAGTTTCGTACGCTACACTCTACACTCCTCATCCCGTTGTTCTTCTTCTTCTTCATCTGGGCCTCTCTTTCTCCCCTTCGACTTCACGGCTTTTGCTCACATAATGCATTTGGTACGCTTCTCTTTTCTCCTATACAAATCTATGCCCACCGTTCCTTTTCCAAATCCCTATCGTCCCACTTTTTTATTCTCCATTGGTTTCCTGGTTTCAATTTCAAACGTCTGTTGCTTGTCACATACGCGACATATCACTTACGCGGTTACGCCTCATCGTCTGTTGCTTGTCGCCTCTCCTCCCGTGCTTGCCGTCGCCGCCGTCGCCGCCATCGCCCGTGCTTGTGCCGTCGCCGCCATCGCCCGTGCTTGTGCCGTCGCCGACGGTGCTTCCCGTGCTTGCCGTCGGTTTGTTCTCTTCTCTTCGTCTTCTTCCTTAATGTTTTCGTCTTTTTCGACTGCAAACGAATATGAATCAATGGCTTCCTGTATCTCCAACAATATATGTGACATGGTTGCCATTGCAAAATGTTTAAATGTCACTCTTATAGTACCCGAATTGGATAAGACCTCATTCTGGGTTGATCCCAAATGTTCGGTTGTCATTGCGGTATTTTGGAAAACTCTTTCTCATTCCCTTTTTCTCTCACTTTATACATGCAAATATGCATATCCCTGGTGGAAAGAGAAAGTAATAGACTTGGACCTGAAAAGGAAGGATGGGCTGTGCCCCTTGACCCCAGAAGAAACTGCACTTAGTATGAAAAATAGTGGAGATTTTGTGAAGAAGTTAAAAGAAGATGGTTATGAAAATTAG ATGCCAAAGAAAAAGAAACGTCAAGCAAAACTTAGTTTCGTACGCTACACTCTACACTCCTCATCCCGTTGTTCTTCTTCTTCTTCATCTGGGCCTCTCTTTCTCCCCTTCGACTTCACGGCTTTTGCTCACATAATGCATTTGGTACGCTTCTCTTTTCTCCTATACAAATCTATGCCCACCGTTCCTTTTCCAAATCCCTATCGTCCCACTTTTTTATTCTCCATTGGTTTCCTGGTTTCAATTTCAAACGTCTGTTGCTTGTCACATACGCGACATATCACTTACGCGGTTACGCCTCATCGTCTGTTGCTTGTCGCCTCTCCTCCCGTGCTTGCCGTCGCCGCCGTCGCCGCCATCGCCCGTGCTTGTGCCGTCGCCGCCATCGCCCGTGCTTGTGCCGTCGCCGACGGTGCTTCCCGTGCTTGCCGTCGGTTTGTTCTCTTCTCTTCGTCTTCTTCCTTAATGTTTTCGTCTTTTTCGACTGCAAACGAATATGAATCAATGGCTTCCTGTATCTCCAACAATATATGTGACATGGTTGCCATTGCAAAATGTTTAAATGTCACTCTTATAGTACCCGAATTGGATAAGACCTCATTCTGGGTTGATCCCAAATGTTCGGTTGTCATTGCGGTATTTTGGAAAACTCTTTCTCATTCCCTTTTTCTCTCACTTTATACATGCAAATATGCATATCCCTGGTGGAAAGAGAAAGTAATAGACTTGGACCTGAAAAGGAAGGATGGGCTGTGCCCCTTGACCCCAGAAGAAACTGCACTTAGTATGAAAAATAGTGGAGATTTTGTGAAGAAGTTAAAAGAAGATGGTTATGAAAATTAG MPKKKKRQAKLSFVRYTLHSSSRCSSSSSSGPLFLPFDFTAFAHIMHLVRFSFLLYKSMPTVPFPNPYRPTFLFSIGFLVSISNVCCLSHTRHITYAVTPHRLLLVASPPVLAVAAVAAIARACAVAAIARACAVADGASRACRRFVLFSSSSSLMFSSFSTANEYESMASCISNNICDMVAIAKCLNVTLIVPELDKTSFWVDPKCSVVIAVFWKTLSHSLFLSLYTCKYAYPWWKEKVIDLDLKRKDGLCPLTPEETALSMKNSGDFVKKLKEDGYEN Homology
BLAST of Lag0020554 vs. NCBI nr
Match: KAG5027901.1 (hypothetical protein JHK87_011415 [Glycine soja]) HSP 1 Score: 110.9 bits (276), Expect = 1.8e-20 Identity = 55/88 (62.50%), Postives = 61/88 (69.32%), Query Frame = 0
BLAST of Lag0020554 vs. NCBI nr
Match: KAG5137681.1 (hypothetical protein JHK82_022412 [Glycine max]) HSP 1 Score: 95.5 bits (236), Expect = 7.7e-16 Identity = 51/91 (56.04%), Postives = 57/91 (62.64%), Query Frame = 0
BLAST of Lag0020554 vs. NCBI nr
Match: TKY50124.1 (GDP-fucose protein O-fucosyltransferase [Spatholobus suberectus]) HSP 1 Score: 92.0 bits (227), Expect = 8.5e-15 Identity = 58/133 (43.61%), Postives = 67/133 (50.38%), Query Frame = 0
BLAST of Lag0020554 vs. NCBI nr
Match: GAY59616.1 (hypothetical protein CUMW_195840 [Citrus unshiu]) HSP 1 Score: 91.3 bits (225), Expect = 1.4e-14 Identity = 59/156 (37.82%), Postives = 71/156 (45.51%), Query Frame = 0
BLAST of Lag0020554 vs. NCBI nr
Match: XP_042470997.1 (rhamnogalacturonan I rhamnosyltransferase 1-like isoform X2 [Zingiber officinale]) HSP 1 Score: 90.1 bits (222), Expect = 3.2e-14 Identity = 58/149 (38.93%), Postives = 71/149 (47.65%), Query Frame = 0
BLAST of Lag0020554 vs. ExPASy Swiss-Prot
Match: Q93ZR8 (Rhamnogalacturonan I rhamnosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RRT2 PE=1 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 4.5e-11 Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0
HSP 2 Score: 53.1 bits (126), Expect = 5.7e-06 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Lag0020554 vs. ExPASy Swiss-Prot
Match: Q4V398 (Rhamnogalacturonan I rhamnosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RRT1 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 7.7e-11 Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0
HSP 2 Score: 52.8 bits (125), Expect = 7.5e-06 Identity = 23/29 (79.31%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Lag0020554 vs. ExPASy Swiss-Prot
Match: Q6NQ51 (Rhamnogalacturonan I rhamnosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RRT4 PE=1 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 4.4e-06 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0
HSP 2 Score: 50.8 bits (120), Expect = 2.8e-05 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of Lag0020554 vs. ExPASy Swiss-Prot
Match: Q6E279 (Rhamnogalacturonan I rhamnosyltransferase 4 OS=Arabidopsis thaliana OX=3702 GN=RRT3 PE=1 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 5.7e-06 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0
HSP 2 Score: 48.5 bits (114), Expect = 1.4e-04 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0
BLAST of Lag0020554 vs. ExPASy Swiss-Prot
Match: B7ZWR7 (O-fucosyltransferase 7 OS=Arabidopsis thaliana OX=3702 GN=OFUT7 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 1.4e-04 Identity = 21/28 (75.00%), Postives = 24/28 (85.71%), Query Frame = 0
BLAST of Lag0020554 vs. ExPASy TrEMBL
Match: A0A2H5Q4P6 (O-fucosyltransferase family protein OS=Citrus unshiu OX=55188 GN=CUMW_195840 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 7.0e-15 Identity = 59/156 (37.82%), Postives = 71/156 (45.51%), Query Frame = 0
BLAST of Lag0020554 vs. ExPASy TrEMBL
Match: A0A5J5C1P8 (O-fucosyltransferase family protein OS=Nyssa sinensis OX=561372 GN=F0562_004301 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 5.6e-12 Identity = 68/212 (32.08%), Postives = 83/212 (39.15%), Query Frame = 0
BLAST of Lag0020554 vs. ExPASy TrEMBL
Match: A0A2N9J8I1 (O-fucosyltransferase family protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS60732 PE=3 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.6e-11 Identity = 58/183 (31.69%), Postives = 70/183 (38.25%), Query Frame = 0
BLAST of Lag0020554 vs. ExPASy TrEMBL
Match: A0A2P5YGI2 (O-fucosyltransferase family protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA05937 PE=3 SV=1) HSP 1 Score: 79.7 bits (195), Expect = 2.1e-11 Identity = 51/152 (33.55%), Postives = 72/152 (47.37%), Query Frame = 0
BLAST of Lag0020554 vs. ExPASy TrEMBL
Match: A0A1R3HHW2 (O-fucosyltransferase family protein OS=Corchorus olitorius OX=93759 GN=COLO4_28852 PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 6.1e-11 Identity = 58/179 (32.40%), Postives = 72/179 (40.22%), Query Frame = 0
BLAST of Lag0020554 vs. TAIR 10
Match: AT3G02250.1 (O-fucosyltransferase family protein ) HSP 1 Score: 70.1 bits (170), Expect = 3.2e-12 Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0
HSP 2 Score: 53.1 bits (126), Expect = 4.1e-07 Identity = 24/29 (82.76%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Lag0020554 vs. TAIR 10
Match: AT5G15740.1 (O-fucosyltransferase family protein ) HSP 1 Score: 69.3 bits (168), Expect = 5.5e-12 Identity = 29/38 (76.32%), Postives = 34/38 (89.47%), Query Frame = 0
HSP 2 Score: 52.8 bits (125), Expect = 5.3e-07 Identity = 23/29 (79.31%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Lag0020554 vs. TAIR 10
Match: AT1G14020.1 (O-fucosyltransferase family protein ) HSP 1 Score: 53.5 bits (127), Expect = 3.1e-07 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0
HSP 2 Score: 50.8 bits (120), Expect = 2.0e-06 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 0
BLAST of Lag0020554 vs. TAIR 10
Match: AT2G03280.1 (O-fucosyltransferase family protein ) HSP 1 Score: 53.1 bits (126), Expect = 4.1e-07 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0
HSP 2 Score: 48.5 bits (114), Expect = 1.0e-05 Identity = 20/28 (71.43%), Postives = 24/28 (85.71%), Query Frame = 0
BLAST of Lag0020554 vs. TAIR 10
Match: AT2G03280.2 (O-fucosyltransferase family protein ) HSP 1 Score: 53.1 bits (126), Expect = 4.1e-07 Identity = 22/38 (57.89%), Postives = 27/38 (71.05%), Query Frame = 0
HSP 2 Score: 52.0 bits (123), Expect = 9.1e-07 Identity = 28/57 (49.12%), Postives = 35/57 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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