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Lag0020548 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACCCACATCAATACTGGCCTAAAGGGGCAAGTATAAAAGTCAATGGAGGAAGAACAGCAAAAATGAAGGCCAAATTGAAGAGAAAATCAAATGGGTTTCTGATGTAAAAAAAAAAGAAACAAACATTTCAATAACTCCAGTCAGAAAACAGACATTTCCATCTAAAAAACACGCAGAAAGGGAGAGTAAGTACACAGTTGCCTTCAGAAAAACACTAGAATTTCAAAACAATTTTTATTCATCGACACATATTACGAGATCACATACAAACTCAGTAAAGAAAGCAGTGAAAAAAGACCAAGAAAGTTACCCAAATCCAAATTCAATCCATTTTAGAATTTCAGAACAATTCGAAAGCTGTGAAGAAAGACCAAGAAGACTAAGTAAAGAAAGTTACCCAAATCCGACAGATAGATTGAAGAGATCGGCGCCGAGACGGCTGAAACCCAGAAAGAAAACTACGACGGTGGAGTTGAAGGGGAGAAAGAAAGGCCCAGATGAAGAAGAAGAATACAATTTAACGGAAGTGGTGGTTCAAAGAGCGACAAGAATCTCCGTGTTGGTGTGGCTCTGTGCGGACGAGCCGCATATTTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACAGTTACGGCGTCGCTGAAAACACATCCGAGGGACGTCGTCTCCTAATCGAAGCCAACGCGCGCGAGCTCGAGTCCATAACAAACTCCTCCTCTGCCGTCTCAACTACTCGGGCGACCGCCTGTCTCCAACGGATTCCGCCGGATCGCTCCTAA ATGACCCACATCAATACTGGCCTAAAGGGGCAAAGCGACAAGAATCTCCGTGTTGGTGTGGCTCTGTGCGGACGAGCCGCATATTTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACAGTTACGGCGTCGCTGAAAACACATCCGAGGGACGTCGTCTCCTAATCGAAGCCAACGCGCGCGAGCTCGAGTCCATAACAAACTCCTCCTCTGCCGTCTCAACTACTCGGGCGACCGCCTGTCTCCAACGGATTCCGCCGGATCGCTCCTAA ATGACCCACATCAATACTGGCCTAAAGGGGCAAAGCGACAAGAATCTCCGTGTTGGTGTGGCTCTGTGCGGACGAGCCGCATATTTCGGCCATATCGACGCGCTTCGTGAACTAGGCCACTGCCTTCAAGACAGTTACGGCGTCGCTGAAAACACATCCGAGGGACGTCGTCTCCTAATCGAAGCCAACGCGCGCGAGCTCGAGTCCATAACAAACTCCTCCTCTGCCGTCTCAACTACTCGGGCGACCGCCTGTCTCCAACGGATTCCGCCGGATCGCTCCTAA MTHINTGLKGQSDKNLRVGVALCGRAAYFGHIDALRELGHCLQDSYGVAENTSEGRRLLIEANARELESITNSSSAVSTTRATACLQRIPPDRS Homology
BLAST of Lag0020548 vs. NCBI nr
Match: KAG7019742.1 (F-box protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 117.5 bits (293), Expect = 6.3e-23 Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0
BLAST of Lag0020548 vs. NCBI nr
Match: KAG6584151.1 (F-box protein, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 117.5 bits (293), Expect = 6.3e-23 Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0
BLAST of Lag0020548 vs. NCBI nr
Match: XP_022923648.1 (F-box protein At5g50450-like [Cucurbita moschata]) HSP 1 Score: 117.5 bits (293), Expect = 6.3e-23 Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0
BLAST of Lag0020548 vs. NCBI nr
Match: XP_023001353.1 (F-box protein At1g67340-like [Cucurbita maxima]) HSP 1 Score: 117.5 bits (293), Expect = 6.3e-23 Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0
BLAST of Lag0020548 vs. NCBI nr
Match: XP_023519168.1 (F-box protein At5g50450-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 117.5 bits (293), Expect = 6.3e-23 Identity = 57/64 (89.06%), Postives = 59/64 (92.19%), Query Frame = 0
BLAST of Lag0020548 vs. ExPASy Swiss-Prot
Match: Q9FYF9 (F-box protein At1g67340 OS=Arabidopsis thaliana OX=3702 GN=At1g67340 PE=1 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 8.9e-20 Identity = 47/81 (58.02%), Postives = 59/81 (72.84%), Query Frame = 0
BLAST of Lag0020548 vs. ExPASy Swiss-Prot
Match: Q9FK27 (F-box protein At5g50450 OS=Arabidopsis thaliana OX=3702 GN=At5g50450 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.2e-19 Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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