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Lag0020532 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACCGCCAACTCTACCGGATCTTCAGCCTTGCCCACCGGAACTACCAACTTCAGTAGTCCACCCCTCAATCAACTACTTAACCAGATAACAACGATCAAATTGGATCGTAGCAACTTCCTTTTGTGGAAGAATTTAGCCCTTCCTATATTGCGGAGTTACAAATTGGAGGGTCATTTGTCGGGAAATAACCCTTGCCCTCCTCAATACATTCAATCCTCAGTCGTGGAGTCGAGTACATCGGCAGAGGAAGAAGCAATCAACACTGGAGTGTTGCGAATGAAGCGTCTGGTTCATCTTCAACACCAGTTGCTATAG ATGGCCACCGCCAACTCTACCGGATCTTCAGCCTTGCCCACCGGAACTACCAACTTCAGTAGTCCACCCCTCAATCAACTACTTAACCAGATAACAACGATCAAATTGGATCGTAGCAACTTCCTTTTGTGGAAGAATTTAGCCCTTCCTATATTGCGGAGTTACAAATTGGAGGGTCATTTGTCGGGAAATAACCCTTGCCCTCCTCAATACATTCAATCCTCAGTCGTGGAGTCGAGTACATCGGCAGAGGAAGAAGCAATCAACACTGGAGTGTTGCGAATGAAGCGTCTGGTTCATCTTCAACACCAGTTGCTATAG ATGGCCACCGCCAACTCTACCGGATCTTCAGCCTTGCCCACCGGAACTACCAACTTCAGTAGTCCACCCCTCAATCAACTACTTAACCAGATAACAACGATCAAATTGGATCGTAGCAACTTCCTTTTGTGGAAGAATTTAGCCCTTCCTATATTGCGGAGTTACAAATTGGAGGGTCATTTGTCGGGAAATAACCCTTGCCCTCCTCAATACATTCAATCCTCAGTCGTGGAGTCGAGTACATCGGCAGAGGAAGAAGCAATCAACACTGGAGTGTTGCGAATGAAGCGTCTGGTTCATCTTCAACACCAGTTGCTATAG MATANSTGSSALPTGTTNFSSPPLNQLLNQITTIKLDRSNFLLWKNLALPILRSYKLEGHLSGNNPCPPQYIQSSVVESSTSAEEEAINTGVLRMKRLVHLQHQLL Homology
BLAST of Lag0020532 vs. NCBI nr
Match: KAA0060627.1 (Reverse transcriptase, RNA-dependent DNA polymerase [Cucumis melo var. makuwa]) HSP 1 Score: 104.0 bits (258), Expect = 8.2e-19 Identity = 45/72 (62.50%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of Lag0020532 vs. NCBI nr
Match: TYK02246.1 (uncharacterized protein E5676_scaffold18G00450 [Cucumis melo var. makuwa]) HSP 1 Score: 104.0 bits (258), Expect = 8.2e-19 Identity = 45/72 (62.50%), Postives = 60/72 (83.33%), Query Frame = 0
BLAST of Lag0020532 vs. NCBI nr
Match: XP_016901223.1 (PREDICTED: uncharacterized protein LOC107991202 [Cucumis melo]) HSP 1 Score: 102.4 bits (254), Expect = 2.4e-18 Identity = 45/78 (57.69%), Postives = 62/78 (79.49%), Query Frame = 0
BLAST of Lag0020532 vs. NCBI nr
Match: KAA0066132.1 (putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa] >TYK15175.1 putative leucine-rich repeat receptor-like protein kinase [Cucumis melo var. makuwa]) HSP 1 Score: 99.8 bits (247), Expect = 1.5e-17 Identity = 51/87 (58.62%), Postives = 64/87 (73.56%), Query Frame = 0
BLAST of Lag0020532 vs. NCBI nr
Match: KAA0049614.1 (UBN2_3 domain-containing protein [Cucumis melo var. makuwa] >TYK15972.1 UBN2_3 domain-containing protein [Cucumis melo var. makuwa]) HSP 1 Score: 95.9 bits (237), Expect = 2.2e-16 Identity = 48/88 (54.55%), Postives = 62/88 (70.45%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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