Lag0020012 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTAGCTGGAAGCACAAGCGATCAGACGAAGAACGAATTAAAAATTAAGGCTTGGGAAGATAGAGAAAAAATCAAAGCCGAAAACAAGTCAGTTCCCTCTCTCTCTTCTGTTTATTTTAACATTATCTTACGATTTCTTTTTTGAACAAAGATTTGAACTTTTGACCATCTACTTGAATATATAATATTTTCTATCAATTTGGCTTTGCTCAACGTGCACAACTACTTAGTACAGTGGACAAGACACCAATTACCATTTCAAAAGTCAATGATTCGATTTCCACCCATAAAATTCTTGAACTTAAAAAAATTATATTATACACCTTATAAGAAAAAAAAAAAAGTAGATTAGAAATGTGAATTTTACCAACCCTTTTTACTTTTCACTAAGTTGAAGTCTTGGAATAAAATTTGTGCAGAGCTGAAAGGAAGTTAGCTTCCACTGAGGCATGGAAGAGCACAAAGAAATCTGCTCTAGAAGCTGAAGTCAAGAAGATAGAGGTAAATTAAATTTTATAATCCTAATTAAGTTTTGAAATTAATTAACCCTAATGAAAATGGAGTATTAATTTCATATATATATATATATATATATATATTATATGGGGAAGGGTGATTTGGAGAAGATGAGGCTAAAGGAAATGGAGAAAGTAAAAAACAAAGAGGCTGAGACTCATAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAAGAGAGAGCACAAAAAGCAAAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTTCCAATACAGTTCCAACCAAGTGTTTTGGCATTTGCCAAGACTAG ATGGTAGCTGGAAGCACAAGCGATCAGACGAAGAACGAATTAAAAATTAAGGCTTGGGAAGATAGAGAAAAAATCAAAGCCGAAAACAAAGCTGAAAGGAAGTTAGCTTCCACTGAGGCATGGAAGAGCACAAAGAAATCTGCTCTAGAAGCTGAAGTCAAGAAGATAGAGGGTGATTTGGAGAAGATGAGGCTAAAGGAAATGGAGAAAGTAAAAAACAAAGAGGCTGAGACTCATAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAAGAGAGAGCACAAAAAGCAAAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTTCCAATACAGTTCCAACCAAGTGTTTTGGCATTTGCCAAGACTAG ATGGTAGCTGGAAGCACAAGCGATCAGACGAAGAACGAATTAAAAATTAAGGCTTGGGAAGATAGAGAAAAAATCAAAGCCGAAAACAAAGCTGAAAGGAAGTTAGCTTCCACTGAGGCATGGAAGAGCACAAAGAAATCTGCTCTAGAAGCTGAAGTCAAGAAGATAGAGGGTGATTTGGAGAAGATGAGGCTAAAGGAAATGGAGAAAGTAAAAAACAAAGAGGCTGAGACTCATAAGGCAGTTGAATCAAAGAAGGCATCCATTGAAGCAAAGAGAGAGCACAAAAAGCAAAAGGTTGAAGAGAAAGCTGCCAAGCATAGGTCTTCCAATACAGTTCCAACCAAGTGTTTTGGCATTTGCCAAGACTAG MVAGSTSDQTKNELKIKAWEDREKIKAENKAERKLASTEAWKSTKKSALEAEVKKIEGDLEKMRLKEMEKVKNKEAETHKAVESKKASIEAKREHKKQKVEEKAAKHRSSNTVPTKCFGICQD Homology
BLAST of Lag0020012 vs. NCBI nr
Match: KGN57373.1 (hypothetical protein Csa_010046 [Cucumis sativus]) HSP 1 Score: 160.6 bits (405), Expect = 8.5e-36 Identity = 91/119 (76.47%), Postives = 104/119 (87.39%), Query Frame = 0
BLAST of Lag0020012 vs. NCBI nr
Match: XP_004140777.2 (remorin [Cucumis sativus]) HSP 1 Score: 131.3 bits (329), Expect = 5.6e-27 Identity = 78/100 (78.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of Lag0020012 vs. NCBI nr
Match: XP_011030105.1 (PREDICTED: uncharacterized protein LOC105129652 isoform X1 [Populus euphratica]) HSP 1 Score: 102.8 bits (255), Expect = 2.1e-18 Identity = 58/112 (51.79%), Postives = 80/112 (71.43%), Query Frame = 0
BLAST of Lag0020012 vs. NCBI nr
Match: XP_024438026.1 (uncharacterized protein LOC7484383 isoform X1 [Populus trichocarpa]) HSP 1 Score: 101.3 bits (251), Expect = 6.2e-18 Identity = 57/112 (50.89%), Postives = 81/112 (72.32%), Query Frame = 0
BLAST of Lag0020012 vs. NCBI nr
Match: PNT11038.2 (hypothetical protein POPTR_012G140900 [Populus trichocarpa]) HSP 1 Score: 101.3 bits (251), Expect = 6.2e-18 Identity = 57/112 (50.89%), Postives = 81/112 (72.32%), Query Frame = 0
BLAST of Lag0020012 vs. ExPASy Swiss-Prot
Match: Q9FFA5 (Remorin 1.4 OS=Arabidopsis thaliana OX=3702 GN=REM1.4 PE=1 SV=1) HSP 1 Score: 94.0 bits (232), Expect = 1.3e-18 Identity = 56/104 (53.85%), Postives = 77/104 (74.04%), Query Frame = 0
BLAST of Lag0020012 vs. ExPASy Swiss-Prot
Match: P93788 (Remorin OS=Solanum tuberosum OX=4113 PE=1 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 1.9e-17 Identity = 56/105 (53.33%), Postives = 75/105 (71.43%), Query Frame = 0
BLAST of Lag0020012 vs. ExPASy Swiss-Prot
Match: Q9M2D8 (Uncharacterized protein At3g61260 OS=Arabidopsis thaliana OX=3702 GN=At3g61260 PE=1 SV=1) HSP 1 Score: 86.7 bits (213), Expect = 2.1e-16 Identity = 52/104 (50.00%), Postives = 73/104 (70.19%), Query Frame = 0
BLAST of Lag0020012 vs. ExPASy Swiss-Prot
Match: O80837 (Remorin OS=Arabidopsis thaliana OX=3702 GN=DBP PE=1 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.1e-15 Identity = 50/112 (44.64%), Postives = 76/112 (67.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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