Lag0019965 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0019965
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionMads box protein, putative
Locationchr5: 47066980 .. 47074099 (-)
RNA-Seq ExpressionLag0019965
SyntenyLag0019965
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGATATATGCATTAATCCATTCAAGCACCCATTTTTATTATTTTTTTTTTCCAACCCATTTGGCTTGTTTGTTTTATTGATTTTTTTTTTGTATGGTTACAGAAAATGGTGAGAGGAAAAGTAGAAATGAAACGAATAGAAAATGCGACAAGTCGACAGGTAACATTCTCAAAGCGTAGAAATGGACTGTTGAAGAAGGCGTATGAACTATCTGTGCTGTGTGATGCTGAAGTTGCAGTCATCATTTTCTCTCAGAAAGGCCGTCTCTATGAGTTTGCAAGCTCTGAGTATGTTTTCTTTCTATTTTTCTCTTCTTCATTTTGTTTTTTTGGGTCTCCCTTTAATAAGGGAAAAAGAAAAGAAAAAGAAAACCATTTTTGTTTTAGTTTGAATAAATGGTTTTGTGGCAGGTTTGCAGCTAATTTATATCGACTTTTTTTTTTTTTTCTTTTACTGAATGAAACCTACTTTCCTGTGCTAAGTTTATTGGGGTCGTACTTCATATTTTTTTTATGGCGATATTTGAAGATTTTCCGGGGAACTTTAATATTTTCCCCCTCTCTTAGGTTCAATAGGGTTTAGGGAATGGGGAGAAGCTTAGAAGTGGTTTGGTATCTTTTTAGTTTTTTCTTTCTTGTTTTGAGAAATTCAAGATTTCACCTAATAACCATTTGATTCTGACAAATTTGCAATCCTTTGTAATACGTAGATAACGCAAAAACAAAGAAAATTATAGTTAAAATTAATGTTTATAAGCTTAACTTTAAAATCAAAGATAAGCTATTGGTAACTGTTTCTTCTTCATTTTTGTGATTTTTATTTTTCAAAATTGTGTACAAATCTTAGAAACAACTTTGGTTCATTAACTATTTGGTTTTTTAGTTTTTTATTTTTGAAAATAATACTTTTTCTTCCCTTTTTTTTTTACTATGGCTTGCATCTCGTAAGGTCACATTTGACTTCTTAGCCAAATTTAACAAACAAAAATGAGTTTTTGAAAATTCCTTTTGTTTTTTGAAAATTGTGTTTGTTTTCTTTCAATTTCTTTACCATGATTTTCATTTTTGTTAAGTAGACATTTGTGTTCTTAGCCAAATTACAAAAACAAAAACAAGTTTTTGAAAACTATTATTTTTTTTCAATTTTTGACTTGGTTTTTAAAAATTGGGAAGGTTGTATATAATAAAACAAAGAAAGATGTGGGTGAGAGTAGTGTTTATAAGCTTAATTTTCAAAAACAAAAAACGAAATAGTTATCAAACGGGGCTTTAGTCTTAAATTCTTTATTTTCCGTTCTAGTTTAATTTTTTTTCCCAAAATATAAATATAATCATCATCTAAACATCTATCGACTTATAAATATATAAAGATATTAAAAATAAATAAAACATATAGAATTTGAATATTTAATTAAAAATTAATTTTCTTATAAAAGTAGCCTATTTTGTATATGTGGTGTGTTTTTAATCACTTGTTTAGAGTTTGTTTTTTAAAGTGAACCTGTATTTCTCCTATGAATTAAAATTTACCTCTTGCTAAGTTCATAAAAATGAAATTAATACATAGTTGGGTCTATATTTTCCTTTAAGATTTATGGTTTGTGGATTAGATGATTGTTCTTCTGGATATATGTTGGATGTTTTTTGTTTTTGAACTCAAACGCCTATGATGGTTGAGGATTTGAATCTCTAAACTTTTAGGTGAGGAAGTTGACAGGTGAATACTTATTTGTGTTTGAGTTTTCTAGTGTTGAATTTGAGTGTTTTTCTACTTAATTTTATGGTTAATTTGAACACTTTTTATTAGGTTTAATTATGAAGGATATAATAAGTAAAAATTAGACTCATTTTATTTTATTTTTTTAATTCAATGATGGTAGGGAGTGGGTATCAAACCATAAGCTTTTGAGATAATAGTAAGTTCTGTATCCACTAGTTTTGCTTGGCTACCTGATTTAATTGAAATGTTCTTATAGTCAATTTTTTTTTTTAATTTGTTAATTTTTTTATTCTATGGAGTGAAAATATATGCATTATGTCCATAGAAACAAGCTGTTTTTGTGTTGGTGAGGGTGGGTGGAACAAATGCGTTAAAAAATTAACCTTCTAACCTTTTTTTTTTTTTATTGTTTTTTAAATTCAACGATTGCTAAAAAGGAAAAATGAACTATTGTAATGGTGTCTTATTTGTTGAGCTTTGCTCAAATAGGCAACCTTCAACAAAATTAGTTTAAGGTTTACTTTTCATTTTAACAGCAATGAGTTCATGTACTGTTGTAGGCAACGTTCTATTTTCATTTTTAAAAGTTGTGCAAGATAATGTATTTAAACAGAACGTTGATTCAATAATGCTTTCATCGTGCTATTAAGCTCTATTTTTTCCCCTAAAAATGCTATATTACTCTTTAACCTCAAATATTTTAATATCCTAAGTTCATATGGTTTGTCCATTGAATTTTCGAAGATAGTACTAAATTTTGTGGATTAACTTCATAAAAAAGATATTAAATAAATTGTAAAAAGTAAAGATAAGCATATGATAAAGGGTTATAGGTAAGGGAATATATAAATTATAGGTAGTAAGGAAATGGAAGAGTGAGTAAGGGGGATGAATACTTAACCTTTTTGTCTTTTTCAAGTACGACTGAATGGATGATGACATGAATGAAACAGAGTCAAACAGTGCAACAAAGGATGGTAAATACTTTTCTTACTCAACAGTATCATAAGATTGTTACTGTCACTATTTTTATTATTTTTATTATTTAAATAACAACCGTTGGATGTAGATTCAAAATCTACGCATTTATTAAGAATCGAATCGTCAATGAATATGGTCGGTTTCATAACCACTATTTTCACTGATGTGTTTCATTTTTACTTTGTAAAAAACGACGTCTCTTTTGATAACTATTTGGTTTTACAAAATTCTGCTTGTTTTCTCACACTTTCTTTGTTATGGTTTTCATCTTTCTTGACAAAACATGTGTGAACTATTTTTAGTCAAATTTCAAAGACAAATAAGTTTTTAAAAATCTTTTTTTTTTTTAGTTTTCATGACTTGGTTTGGATTTTGTATACATTTACAAAAAGAAGATAACTCATAGGTGGAAATAGTGTACATAAGTTTAATATTAAAAAATTCAAAACTAAATGGTTATCGAATAGGACCTAATGAAATAGTTTTTAAATATTTGTTTTTGTTTTTGAAATCTGAGATGGGAATTCGATGTTTACCAATATGGTGATAAAATACTATAAAAATTGTGAGGAAGTAGAAATAATTTTTAAAATAAAGAACTAAAATTGGAATAATTATCCAATGAAACCTATACGTGTGAAATACTATTTTTAAAATTATTCACAAGTCCATGCTTTCCTACCTTGGTGTATGTGTGTGAATAAGGAAAAGAGTGAATGAGGGAATAATCGAGGATCGAGGAGAGAAGCTAGAATGAGAATTATAATAATTATTATTATTCTTCTTATTATTATTTTTTTTCGGAGGATTCGAACTTATGACATTTTGGTCGATAGTGCATATTTTATGTTCGTTGGGCTAGACTCATTTGAACTTATTTTCATTCATTTAACTTTCATTTTCTATCCTAATCTCTATTTTCTCATTACTTTTTCACTTCTCAGCTTTTTAAAACATGAAATTTCTCAAAATTCAGTTTTTTACTCTCAACCTTCTAACTCTCTCACCTCCTCCAAACCCTAAACTAGATTCGTGATGAATAGTTTAGTTTTAACAGTGGACAGCATTGACTGCATTTGAGTTTAGTTTTAACTTTTTTTGTATAGCGAGTGTTTTTTCATTCTTGATTTCAAGTTTGGTTTATATTAATTAAATTTTAATTAGTGATTTATTGGTTCATATATCAACAATGTTTTAATTTAATTTTAAAGAGTTATTTGTTACCTACTATTTACCCAAATCTAGAGTTCAATGGGACAAGTAAAAGTTTCAAGGTAAAATTTGATTTTGTTATCCCCATAAAACTCTTAAAATAAAGATTTGACAACAAAATAGATTAAAAAGTAATCTCCCAATTAAATGCTAGTTTTGGACTTAATCCTTTAGCATAATAAGCAGGTTAACAGTACTTCTCTGTCTTGGATGTCATGGGGCCTTGCTTTTGTGTAAAACCAATTTGTATATCTCACAGTTCATAAATCAAACTTTATAATCACCATTTATTTGAATTATTCTTATGACTGAGTATGGTTTAATGTTGTGGATTAAAACTTATGTACGTAAAACAGATTAGAAAAAAGGGCTTTGTTTGCATTGTGGTAATAGTAAGCTGTGTTTTTGGAATATATATATATATAATATTAGAAGAGGATATTAATAATTAATGTTGTGATTTTGGATTATTATTGTTTAAGAATGCCTAGGATTGTAGAACGATATCGCAAATGTGCAAGAGAAGGGAGGAACAACAATAGCAAATTTGATAGACAACTCCAATTACAGGTATTTTCTACAAAATTCCTCATAAGTGATTCACGTCAGTTCAATAATATTTTCTTGGACCAAATGTAATAGGGTCTCATGAGATTAGTCGTTAGTTGGTCCTTTAACAAGCAAATGTAGTAGGATCAGACGGTTGTCTTATTAGATTAGTCCAGACACTCATGGGTATTCAAAGGATTTATCATAATCCATATATGTTCAAACTCTTGGATCAATATTTGATTTTGTTACTTCATTTTTAAAAATATGTTTATACTAATTTAAACAAAAAAGAAAAAAAAAATAGATAAACCTTCCACATAAGCAAACAAAAAAAAAAGTGATGTAAGATTAATGAACTTTATGAAGAAGAATAGATTATTACCTATCATGTGTAATTAGATTTTCATTTGATGATCAAATTAAATCATATTTTGTGTATCTAAAAGATTAAAACGTTACCTTATGGAACCTAGACATCAATTTGAGTAGTTTCCTTTTGCCATAAAGTATATTTATTTAGGTTGAAATTGAATTGAAATCATTTTTCATATTAGGTTGATTCGGATTTTCCATAGACTATAGCATTGACTGGTTCCATAAATTCATGATTCTCCATTTTTCTGTAGCAATTAAGGGTTGAAGCCGAAAGCATTAATGAGAAGATCGAGTTGATTCAAGTTTCTCAACGGTGATTTTTTAATTTTTTTTTTTTTAATTGGAATGTGTGTGTATATTAGATTTTAAAATTTAAATGCACACAGGAAGCTGTTGGGATATGGACTGGATTCTTGTTCCCTTGATGAACTTCAATTACTCGATGCTCAGCTTCAGCAAAGTTTGTTCCAAATTAGGGCCAGAAAGGTACACACATATATTTTATTTTCTAAATTTCATTTTCTGGAGAACCAAATAATTGGAAGAAAAAAAAAAAAACATTTAAGAACTCATAAGCTGGAACTGGACCTGGACTGTGTTATAGGTTCAGCTATACAAGGAACAAATACAACAACTAGAAGAGAAGGTAATTCAGTTTTGTCTTTTAAACCTTATATTTATTTATTTATTTATTTATTATTTTTTGTTGAATGATTTATTAAGACCTTGAATTTTTACTCTTTCTTATTGAATTCAGGAAAAAATCCTTTTAGAAGAGAACAGAAAATTGTCTTTAAAGGTGAATAACTCTTTCGAGCTTGTGCTTCTTTTTCTTTTCTTTTCTTTTCTTTTTTTACTGTGTTCGAAATGTTTTGTTAAAATTTATTAGTTGAGTCAAGCTGCATTTTCCGAAAATATTAATAATTTTTTATCATATGATTTGTTGAAAACTTTAATTAGTTGAAATATTGAAGTTGACTTGTATGAATCTTCAGTAATCTCTTCGTGGAGAAGTAAACAACCAATTACAACGTTAATAATTCTATCTAGAGAAATTATAACGTTAATAAGTGTATTATATATTAAAAAAGCGAATTGAACTAATAAAATAATTAAAAATGAAAAATGAGCATTCAATTATTTAATCTTTAAAAAATGTACATATATTCTCTCTGTTTCTGCATTAAAAAAAGGATGAATCGAATGACTTTTTAAAATTATTATCCAGAATGTGTCTAACTCTTGCCCCTCAACGGTAACATTTATCAGTTTTTTTTATAGCGTTTTAGTGATCTAATCAGTATTCAGTATAAAATAATTTTTGGATAAGAGTATATTCAGTATAAAATATTTAGTTTTGGACCATAAAATTCAACATTTATAAGGCTCCTAAATCGTCAAATCATATCCTTCTCTTTAATCTTTTTTTTCTTTCTCTAACTTATCTTTCTCTCTAATTTTTTTCTCTATAATTTGTCCTCGAATTTCCCTCTCCAACAAATTTCATGTGGAGGGAAAGCGAGAAAAATTTAAATAAGAAATATTAGTCAAGAAAAGTTTGAGAGAGACATTAACAAAAGGAATCTAAGATAGAGTTGTAGTCACAATGAGAAAACACATTATATAGAGGAAGATTTAGAGAGTCGAGGAAAAGAAATGAGGTTACGAAGAATTGAATATTATTTTTAAGAACTTTTGTTTTTATTACCATTTTATAATTGGCCTTGCAATTTCAATGAGTGTTTTTGAAATTAAGAAATTTAGGATTGAATTTGAGTTATCAAATGAAATTTAAATTACATAAAATAATTAAACTTACTATAGTCTACCATTTTAACTCAACAAAATAAGTAAAACAACAAGAGAACAAAATCATTGGAAGAAGTCATTCATTGTTTCTCATAATTCTCTTAAAAATATGACATGAATGATAGGTTCTGTAGGTATCAGCCCTTTTGCAATCTTTTTTGCTGAAAAAAAGTTCACTTTTTTTTTTTTTTTTCTTTTTTTCCTTTTGTGATTTATCTTTACTATTATTATTATTATTTGTTCCTTCTCTTTTTCTGTTCATTCCCTCGTAATTGCAGCAGTGAAACGAGTCAAAAGAGTTTCTTGCACGCCACATTTCTCATACTTTTAAATTAAAATTTTCCCCCGAAACCAATAATTTTACATTTTCACAAAGTAATTGCAGGCCGAAGCTCATGGTGGCGCCGCCGCTCCCGGCTGCCGGAGGAGCTCAAGTTGGGCAGTCGACACCCAGTTGTCCATTTGA

mRNA sequence

ATGAAAATGGTGAGAGGAAAAGTAGAAATGAAACGAATAGAAAATGCGACAAGTCGACAGGTAACATTCTCAAAGCGTAGAAATGGACTGTTGAAGAAGGCGTATGAACTATCTGTGCTGTGTGATGCTGAAGTTGCAGTCATCATTTTCTCTCAGAAAGGCCGTCTCTATGAGTTTGCAAGCTCTGAAATGCCTAGGATTGTAGAACGATATCGCAAATGTGCAAGAGAAGGGAGGAACAACAATAGCAAATTTGATAGACAACTCCAATTACAGCAATTAAGGGTTGAAGCCGAAAGCATTAATGAGAAGATCGAGTTGATTCAAGTTTCTCAACGGAAGCTGTTGGGATATGGACTGGATTCTTGTTCCCTTGATGAACTTCAATTACTCGATGCTCAGCTTCAGCAAAGTTTGTTCCAAATTAGGGCCAGAAAGGTTCAGCTATACAAGGAACAAATACAACAACTAGAAGAGAAGGCCGAAGCTCATGGTGGCGCCGCCGCTCCCGGCTGCCGGAGGAGCTCAAGTTGGGCAGTCGACACCCAGTTGTCCATTTGA

Coding sequence (CDS)

ATGAAAATGGTGAGAGGAAAAGTAGAAATGAAACGAATAGAAAATGCGACAAGTCGACAGGTAACATTCTCAAAGCGTAGAAATGGACTGTTGAAGAAGGCGTATGAACTATCTGTGCTGTGTGATGCTGAAGTTGCAGTCATCATTTTCTCTCAGAAAGGCCGTCTCTATGAGTTTGCAAGCTCTGAAATGCCTAGGATTGTAGAACGATATCGCAAATGTGCAAGAGAAGGGAGGAACAACAATAGCAAATTTGATAGACAACTCCAATTACAGCAATTAAGGGTTGAAGCCGAAAGCATTAATGAGAAGATCGAGTTGATTCAAGTTTCTCAACGGAAGCTGTTGGGATATGGACTGGATTCTTGTTCCCTTGATGAACTTCAATTACTCGATGCTCAGCTTCAGCAAAGTTTGTTCCAAATTAGGGCCAGAAAGGTTCAGCTATACAAGGAACAAATACAACAACTAGAAGAGAAGGCCGAAGCTCATGGTGGCGCCGCCGCTCCCGGCTGCCGGAGGAGCTCAAGTTGGGCAGTCGACACCCAGTTGTCCATTTGA

Protein sequence

MKMVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASSEMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLDSCSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLEEKAEAHGGAAAPGCRRSSSWAVDTQLSI
Homology
[Close]
BLAST of Lag0019965 vs. NCBI nr
Match: XP_038883063.1 (MADS-box protein AGL42-like isoform X1 [Benincasa hispida])

HSP 1 Score: 285.4 bits (729), Expect = 3.5e-73
Identity = 158/198 (79.80%), Postives = 171/198 (86.36%), Query Frame = 0 

Query: 3   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 62
           MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60

Query: 63  EMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLDS 122
           EMPRIVERYRKCAR+ + NN+KFDRQLQLQQ RVEAESIN+K+EL+Q+S RKLLGYGLDS
Sbjct: 61  EMPRIVERYRKCARDAK-NNTKFDRQLQLQQSRVEAESINKKMELLQLSHRKLLGYGLDS 120

Query: 123 CSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLEE--------------KAEAHGGAA 182
           CSLDELQ+LDAQLQ+SLFQIRARK QLYKEQ+QQL+E              K  AHG AA
Sbjct: 121 CSLDELQVLDAQLQRSLFQIRARKAQLYKEQLQQLQEKERLLSEEKKKLSLKVTAHGAAA 180

Query: 183 APGCRRSSSWAVDTQLSI 187
             GCRRS +  V+TQLSI
Sbjct: 181 MHGCRRSPTSVVNTQLSI 197

[Close]
BLAST of Lag0019965 vs. NCBI nr
Match: XP_008439149.1 (PREDICTED: MADS-box protein AGL42-like isoform X2 [Cucumis melo])

HSP 1 Score: 280.8 bits (717), Expect = 8.6e-72
Identity = 154/198 (77.78%), Postives = 169/198 (85.35%), Query Frame = 0 

Query: 3   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 62
           MVRGKVEMKRIENATSRQVTFSKRRNG+LKKAYELSVLCDAEVAVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGVLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60

Query: 63  EMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLDS 122
           EMP+I++RYRKC  +  NNN+KFDRQLQLQQ R+EAESIN+K+EL+Q+S  KLLGYGLD+
Sbjct: 61  EMPKIMDRYRKCTIDANNNNTKFDRQLQLQQSRLEAESINKKMELMQLSHGKLLGYGLDN 120

Query: 123 CSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLEE--------------KAEAHGGAA 182
           CSLDELQ+LDAQLQ+SLFQIRARK QLYKEQIQQL+E              KA A GGAA
Sbjct: 121 CSLDELQVLDAQLQRSLFQIRARKAQLYKEQIQQLQEKEKLLWEENRILSLKAAAKGGAA 180

Query: 183 APGCRRSSSWAVDTQLSI 187
             GCR SSS  VDTQLSI
Sbjct: 181 THGCRSSSSSLVDTQLSI 198

[Close]
BLAST of Lag0019965 vs. NCBI nr
Match: XP_038883070.1 (MADS-box protein AGL42-like isoform X2 [Benincasa hispida])

HSP 1 Score: 279.6 bits (714), Expect = 1.9e-71
Identity = 157/198 (79.29%), Postives = 170/198 (85.86%), Query Frame = 0 

Query: 3   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 62
           MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 60

Query: 63  EMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLDS 122
           EMPRIVERYRKCAR+ + NN+KFDRQLQLQ  RVEAESIN+K+EL+Q+S RKLLGYGLDS
Sbjct: 61  EMPRIVERYRKCARDAK-NNTKFDRQLQLQS-RVEAESINKKMELLQLSHRKLLGYGLDS 120

Query: 123 CSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLEE--------------KAEAHGGAA 182
           CSLDELQ+LDAQLQ+SLFQIRARK QLYKEQ+QQL+E              K  AHG AA
Sbjct: 121 CSLDELQVLDAQLQRSLFQIRARKAQLYKEQLQQLQEKERLLSEEKKKLSLKVTAHGAAA 180

Query: 183 APGCRRSSSWAVDTQLSI 187
             GCRRS +  V+TQLSI
Sbjct: 181 MHGCRRSPTSVVNTQLSI 196

[Close]
BLAST of Lag0019965 vs. NCBI nr
Match: XP_022140854.1 (MADS-box protein AGL42-like isoform X2 [Momordica charantia])

HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 154/198 (77.78%), Postives = 170/198 (85.86%), Query Frame = 0 

Query: 3   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 62
           MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDA++AVIIFSQKGRLYEFASS
Sbjct: 1   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQIAVIIFSQKGRLYEFASS 60

Query: 63  EMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLDS 122
           ++ RIVERYRKCAR+G+ NNSK D+QLQLQ+L+ EAESI+EKIEL+Q+SQRKLLGYGLDS
Sbjct: 61  DIQRIVERYRKCARDGK-NNSKIDKQLQLQELKNEAESISEKIELVQLSQRKLLGYGLDS 120

Query: 123 CSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLEE--------------KAEAHGGAA 182
           CSLDELQ +DAQLQ+SLF IRARK QLYKEQI+QL+E              KA AHGGAA
Sbjct: 121 CSLDELQEIDAQLQRSLFLIRARKAQLYKEQIEQLKEKERLLLEKNARLSLKAAAHGGAA 180

Query: 183 APGCRRSSSWAVDTQLSI 187
           A GCR S S  VDTQL I
Sbjct: 181 ALGCRSSPSCEVDTQLFI 197

[Close]
BLAST of Lag0019965 vs. NCBI nr
Match: XP_022140853.1 (MADS-box protein AGL42-like isoform X1 [Momordica charantia])

HSP 1 Score: 276.6 bits (706), Expect = 1.6e-70
Identity = 154/199 (77.39%), Postives = 171/199 (85.93%), Query Frame = 0 

Query: 2   KMVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFAS 61
           +MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDA++AVIIFSQKGRLYEFAS
Sbjct: 3   EMVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAQIAVIIFSQKGRLYEFAS 62

Query: 62  SEMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLD 121
           S++ RIVERYRKCAR+G+ NNSK D+QLQLQ+L+ EAESI+EKIEL+Q+SQRKLLGYGLD
Sbjct: 63  SDIQRIVERYRKCARDGK-NNSKIDKQLQLQELKNEAESISEKIELVQLSQRKLLGYGLD 122

Query: 122 SCSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLEE--------------KAEAHGGA 181
           SCSLDELQ +DAQLQ+SLF IRARK QLYKEQI+QL+E              KA AHGGA
Sbjct: 123 SCSLDELQEIDAQLQRSLFLIRARKAQLYKEQIEQLKEKERLLLEKNARLSLKAAAHGGA 182

Query: 182 AAPGCRRSSSWAVDTQLSI 187
           AA GCR S S  VDTQL I
Sbjct: 183 AALGCRSSPSCEVDTQLFI 200

[Close]
BLAST of Lag0019965 vs. ExPASy Swiss-Prot
Match: Q9FIS1 (MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 1.2e-47
Identity = 100/158 (63.29%), Postives = 132/158 (83.54%), Query Frame = 0 

Query: 3   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 62
           MVRGK+EMK+IENATSRQVTFSKRRNGLLKKAYELSVLCDA++++IIFSQ+GRLYEF+SS
Sbjct: 1   MVRGKIEMKKIENATSRQVTFSKRRNGLLKKAYELSVLCDAQLSLIIFSQRGRLYEFSSS 60

Query: 63  EMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLDS 122
           +M + +ERYRK  ++  +  S  D Q+ LQQL+ EA  +  KIEL++  +RKLLG G+ S
Sbjct: 61  DMQKTIERYRKYTKD--HETSNHDSQIHLQQLKQEASHMITKIELLEFHKRKLLGQGIAS 120

Query: 123 CSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLEEK 161
           CSL+ELQ +D+QLQ+SL ++R RK QL+KEQ+++L+ K
Sbjct: 121 CSLEELQEIDSQLQRSLGKVRERKAQLFKEQLEKLKAK 156

[Close]
BLAST of Lag0019965 vs. ExPASy Swiss-Prot
Match: O82743 (Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 4.3e-42
Identity = 92/156 (58.97%), Postives = 124/156 (79.49%), Query Frame = 0 

Query: 3   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 62
           MVRGK EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEVA++IFS + +LYEF+SS
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALVIFSPRSKLYEFSSS 60

Query: 63  EMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLDS 122
            +   +ERY++  +E  NN+ + D     QQ R E   + +KIE +++S+RKLLG G+D+
Sbjct: 61  SIAATIERYQRRIKEIGNNHKRNDNS---QQARDETSGLTKKIEQLEISKRKLLGEGIDA 120

Query: 123 CSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLE 159
           CS++ELQ L+ QL +SL +IRA+K QL +E+I++L+
Sbjct: 121 CSIEELQQLENQLDRSLSRIRAKKYQLLREEIEKLK 153

[Close]
BLAST of Lag0019965 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.6e-42
Identity = 97/176 (55.11%), Postives = 134/176 (76.14%), Query Frame = 0 

Query: 3   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 62
           MVRGK +MKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEV++IIFS KG+LYEFASS
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFASS 60

Query: 63  EMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLDS 122
            M   ++RY +  ++    ++K   +  +Q L+ EA ++ +KIE ++ S+RKLLG G+ +
Sbjct: 61  NMQDTIDRYLRHTKD--RVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGT 120

Query: 123 CSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLEEKAEAHGGAAAPGCRRSSSW 179
           CS++ELQ ++ QL++S+  IRARK Q++KEQI+QL++K +A    AA   + S  W
Sbjct: 121 CSIEELQQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKA---LAAENEKLSEKW 171

[Close]
BLAST of Lag0019965 vs. ExPASy Swiss-Prot
Match: Q38838 (Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=1 SV=2)

HSP 1 Score: 166.0 bits (419), Expect = 4.0e-40
Identity = 93/159 (58.49%), Postives = 125/159 (78.62%), Query Frame = 0 

Query: 3   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEF-AS 62
           MVRGK EMKRIENATSRQVTFSKRRNGLLKKA+ELSVLCDAEVA+IIFS +G+LYEF +S
Sbjct: 1   MVRGKTEMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIIFSPRGKLYEFSSS 60

Query: 63  SEMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLD 122
           S +P+ VERY+K  ++  +N+ + D     QQ + E   +  KIE +++S RK++G GLD
Sbjct: 61  SSIPKTVERYQKRIQDLGSNHKRNDNS---QQSKDETYGLARKIEHLEISTRKMMGEGLD 120

Query: 123 SCSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLEEK 161
           + S++ELQ L+ QL +SL +IRA+K QL +E+ ++L+EK
Sbjct: 121 ASSIEELQQLENQLDRSLMKIRAKKYQLLREETEKLKEK 156

[Close]
BLAST of Lag0019965 vs. ExPASy Swiss-Prot
Match: Q9XJ60 (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS50 PE=2 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.5e-39
Identity = 86/158 (54.43%), Postives = 119/158 (75.32%), Query Frame = 0 

Query: 3   MVRGKVEMKRIENATSRQVTFSKRRNGLLKKAYELSVLCDAEVAVIIFSQKGRLYEFASS 62
           MVRGK +MKRIEN TSRQVTFSKRRNGLLKKA+ELSVLCDAEVA+I+FS +G+LYEFAS+
Sbjct: 1   MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASA 60

Query: 63  EMPRIVERYRKCAREGRNNNSKFDRQLQLQQLRVEAESINEKIELIQVSQRKLLGYGLDS 122
              + +ERYR   +E   N +    Q  ++Q++ +A+ + +K+E ++  +RKLLG  LD 
Sbjct: 61  STQKTIERYRTYTKENIGNKTV---QQDIEQVKADADGLAKKLEALETYKRKLLGEKLDE 120

Query: 123 CSLDELQLLDAQLQQSLFQIRARKVQLYKEQIQQLEEK 161
           CS++EL  L+ +L++SL  IR RK +L +EQ+ +L EK
Sbjct: 121 CSIEELHSLEVKLERSLISIRGRKTKLLEEQVAKLREK 155

The following BLAST results are available for this feature:
BLAST of Lag0019965 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038883063.13.5e-7379.80MADS-box protein AGL42-like isoform X1 [Benincasa hispida][more]
XP_008439149.18.6e-7277.78PREDICTED: MADS-box protein AGL42-like isoform X2 [Cucumis melo][more]
XP_038883070.11.9e-7179.29MADS-box protein AGL42-like isoform X2 [Benincasa hispida][more]
XP_022140854.11.6e-7077.78MADS-box protein AGL42-like isoform X2 [Momordica charantia][more]
XP_022140853.11.6e-7077.39MADS-box protein AGL42-like isoform X1 [Momordica charantia][more]
BLAST of Lag0019965 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FIS11.2e-4763.29MADS-box protein AGL42 OS=Arabidopsis thaliana OX=3702 GN=AGL42 PE=1 SV=1[more]
O827434.3e-4258.97Agamous-like MADS-box protein AGL19 OS=Arabidopsis thaliana OX=3702 GN=AGL19 PE=... [more]
O646459.6e-4255.11MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1[more]
Q388384.0e-4058.49Agamous-like MADS-box protein AGL14 OS=Arabidopsis thaliana OX=3702 GN=AGL14 PE=... [more]
Q9XJ601.5e-3954.43MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 140..167
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availablePANTHERPTHR11945:SF341MADS-BOX PROTEIN SOC1coord: 3..163
NoneNo IPR availablePANTHERPTHR11945MADS BOX PROTEINcoord: 3..163
IPR002100Transcription factor, MADS-boxPRINTSPR00404MADSDOMAINcoord: 5..25
score: 68.28
coord: 25..40
score: 86.34
coord: 40..61
score: 61.64
IPR002100Transcription factor, MADS-boxSMARTSM00432madsneu2coord: 3..62
e-value: 1.0E-41
score: 154.6
IPR002100Transcription factor, MADS-boxPFAMPF00319SRF-TFcoord: 12..59
e-value: 3.5E-27
score: 93.7
IPR002100Transcription factor, MADS-boxPROSITEPS00350MADS_BOX_1coord: 5..59
IPR002100Transcription factor, MADS-boxPROSITEPS50066MADS_BOX_2coord: 3..63
score: 32.576035
IPR036879Transcription factor, MADS-box superfamilyGENE3D3.40.1810.10coord: 16..95
e-value: 8.0E-30
score: 104.8
IPR036879Transcription factor, MADS-box superfamilySUPERFAMILY55455SRF-likecoord: 5..81
IPR002487Transcription factor, K-boxPFAMPF01486K-boxcoord: 89..162
e-value: 2.4E-17
score: 62.9
IPR002487Transcription factor, K-boxPROSITEPS51297K_BOXcoord: 91..186
score: 11.260632
IPR033896MADS MEF2-likeCDDcd00265MADS_MEF2_likecoord: 5..74
e-value: 1.59438E-43
score: 137.684

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0019965.1Lag0019965.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0045944 positive regulation of transcription by RNA polymerase II
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003700 DNA-binding transcription factor activity
molecular_function GO:0046983 protein dimerization activity
molecular_function GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding
molecular_function GO:0003677 DNA binding