Lag0019936 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0019936
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ATP-dependent Clp protease ATP-binding subunit CLPT1
Location	chr5: 46826843 .. 46829530 (+)
RNA-Seq Expression	Lag0019936
Synteny	Lag0019936

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCACTCGCATGAATTCTCTTTCTCCTTCCCAAGTCCCATTTTCCCTTCCAACTCAATCTAATCGTTACACTTTAGAACAGAAAACTCTATTCCTTCCCGTCAGCCCCCTAATCGATCTGAAGCTCGCAATTAAGCGTTCCACTGCCACCCATCCGGTCTCGAAGTTCAGTCGCCGCGCCACCACTGCCACTGTATCGTTTAGCCTCCCGGCTTCGTAGGATTTGATTGCTACTCTTGCTTGAGTTTCTGATTCTTTTTCTTTTTCAAGCCCTTAGAACTCAAATGTTTTGTCTGATTTTGCAGGAGACCCGAGGGCGTTTCCCCCGAGAAACTTCCCAAGTAAGTTTACCCACAAAATTTCCTCCATTCAATTGGTGTCTTTCTGCTGCATGCGTCGAGCTTAAGTGGTGTTAATTGGAGTGTTTGTTGCTTTCCTTCATAATGTGTGAAGATTATAATCTAATTTAACTAATCTTTTTGAAACTTAATGAGGGTTGATGATTATTTGGGTAGAACTGTAACTTTAGTCCTTATCAATACGTTTCAAGACTTCAATTTTAGTCTTTAAGGGCCTGTCTGGGAAGGTTACAATTAATTTTAAGGACTGTGGTTGAAACTGAAAGGTTAAAATTGTTGTGCATTTGAAACTATTCGCAGATATGTTGAACCATAACTTAACGTGGCAGTCGTGTCACCTCTTACTTGCAGCATATCATAGAATGAGTTCTTCTTAACTTTCCATTTTTGGTTGTACGACCTTTTCTCATCCACCTACATTGATTTTCCAGCATGTCATAGCTATTGAATCATTTGTTATATGACTTACCCTTTTCCGCATTAGACTGTCAATTAATGCAGAAATGACATTGGTGTTAACTGGGATGTTTGTTTGTTGAATTTGTGATGTATAAGATGGTCAGCTAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACAGGCACGGAAGCTTTGCTAATGGGAATTTTAATAGAGGGTTAGTAGGCGTTCCAACTCTGAGGTCATTTCTTATTTACATCTAAATTTGGACTTGTGAATTGATTTAGTTTAGTTGAATGCATTTAAGTTTCAGGATTATCTGAATCTTGAACCTTTTTTTTTGTAATTTTTAAAATACACTAAAATCAAGATCATGTCCCAAGAAGCTAACATTTGATGACCACTTTCAAAATGTGGCTACTTTTTCCCACGCCCCTTTCCAGCATCATTCATGATATCTTCCATTGTCATCTGATGTCTCATGTTCAACTACAGAATTATCTTTGAAAGACTTGCTTATGTTAAAAGGATTCGACTTGAAGCTTATGTTCATGTCAGCTCCTGTCAGCTGATGATCATGATTTATGAGTAACCTATTTTTGACAGTAGCCTTGGGCCACTGGCCACGTGCTTTTTGAATGTCCTTATGTGCAATTGCTAACAATATACATGGTGAAGTGAATTGACAATTTTCAGCCTCGTTCAAGAATAAAGGGGATAGGAATAAAAAATACTAAACTATAGGTGCATATTCACTTTGGTTTCAATCTCGTCTATGCTCGAGTGCTTGATAATGTTCATTTTCCTTGGTGGATATTTATTCACATTCATTTCAGGAACAAGTATAGCTGCCAGGTTCTTAAGGGCTAATGGAATTACACTTTTCAAAGTAAGAGAAGAAACTGTCAAGCTACTTGGAAAATCTGACATGTATTTCTTCAGCCCAGAGCATCCTCCATTGACTGAACCGGCTCAGAGGGCACTTGATTGGGCTGTTGCGGAGAAGTTAAAGTCAGGTGAGATCATTCTTCCTAATCATGCAGCAAATGCGATTCTTAATTAGCCTGCAAGTGAATGATGATACTTGAGTTTTCTACTGAAACCTCTCTGCATGCACAAGCTCCCATTGTAAAGAATGAGATGTTAAGACAAGTTTTTTGACTGCTGGTTGAATCAGTTTTTTAGCATTGACTTTTGCCTTGTCCAAACATTAAACAAGGGCCTTATTGTGAGAGGAAAACAGATGAAGGGAGGTTATGCGTGTTTTTGCCACTGGCTCTTTGACAGCTTCAGTGGAAAGGAAGTAAATCAGATAATTCTTCCATGGCTAGAATAGTGAATAGACGATTTTGGATTTCCAGATTACGCTTACCTCAATAGAATGTAAAGCATTTATTTTTTCATTTAGCAAGAAACACCCACTTGCAAAAAATTTTGCAGACCTTTCTGGCCATTTTAGCGAAGAAGGATTTCAGTACATCTTATTATCTAGTTATTCACAACAAATGTGCACAAGTATGTGTGGACTTCTTGATTGTAGATATTTACTAGAATGATTATGATATAGGCGCATTCTGTTTTGTACTTCTGCTTGTGTCCGTCTTTGTTGGTTGAACCTAAGGTCTTGTATGCAGGTCAACCTGGGGAAATAACTACCGGTCATTTGCTTCTTGGTATCTGGTCAGAGGAATCAGCAGGTCACAAGATCTTGGTCACCCTTGGCTTTGATGATGAGAAAGCGAAAGAGGTCGAAAAAACTGTAAGTTCTAAATTATTTTCATCTAGTTAGTAGCACCCTCGGGACTTGATGATGTACTCCACTAATATGTCTGATTGTTCACAGGTGGACAAGGATGCAACTTTCAGTTATAAGTAG

mRNA sequence

ATGGCGGCCACTCGCATGAATTCTCTTTCTCCTTCCCAAGTCCCATTTTCCCTTCCAACTCAATCTAATCGTTACACTTTAGAACAGAAAACTCTATTCCTTCCCGTCAGCCCCCTAATCGATCTGAAGCTCGCAATTAAGCGTTCCACTGCCACCCATCCGGTCTCGAAGTTCAGTCGCCGCGCCACCACTGCCACTGTATCGTTTAGCCTCCCGGCTTCGAGACCCGAGGGCGTTTCCCCCGAGAAACTTCCCAAATGGTCAGCTAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACAGGCACGGAAGCTTTGCTAATGGGAATTTTAATAGAGGGAACAAGTATAGCTGCCAGGTTCTTAAGGGCTAATGGAATTACACTTTTCAAAGTAAGAGAAGAAACTGTCAAGCTACTTGGAAAATCTGACATGTATTTCTTCAGCCCAGAGCATCCTCCATTGACTGAACCGGCTCAGAGGGCACTTGATTGGGCTGTTGCGGAGAAGTTAAAGTCAGGTCAACCTGGGGAAATAACTACCGGTCATTTGCTTCTTGGTATCTGGTCAGAGGAATCAGCAGGTCACAAGATCTTGGTCACCCTTGGCTTTGATGATGAGAAAGCGAAAGAGGTCGAAAAAACTGTGGACAAGGATGCAACTTTCAGTTATAAGTAG

Coding sequence (CDS)

ATGGCGGCCACTCGCATGAATTCTCTTTCTCCTTCCCAAGTCCCATTTTCCCTTCCAACTCAATCTAATCGTTACACTTTAGAACAGAAAACTCTATTCCTTCCCGTCAGCCCCCTAATCGATCTGAAGCTCGCAATTAAGCGTTCCACTGCCACCCATCCGGTCTCGAAGTTCAGTCGCCGCGCCACCACTGCCACTGTATCGTTTAGCCTCCCGGCTTCGAGACCCGAGGGCGTTTCCCCCGAGAAACTTCCCAAATGGTCAGCTAGAGCAATAAAGTCATTTGCAATGGCAGAATTGGAAGCAAGGAAACTCAAATATCCAAATACAGGCACGGAAGCTTTGCTAATGGGAATTTTAATAGAGGGAACAAGTATAGCTGCCAGGTTCTTAAGGGCTAATGGAATTACACTTTTCAAAGTAAGAGAAGAAACTGTCAAGCTACTTGGAAAATCTGACATGTATTTCTTCAGCCCAGAGCATCCTCCATTGACTGAACCGGCTCAGAGGGCACTTGATTGGGCTGTTGCGGAGAAGTTAAAGTCAGGTCAACCTGGGGAAATAACTACCGGTCATTTGCTTCTTGGTATCTGGTCAGAGGAATCAGCAGGTCACAAGATCTTGGTCACCCTTGGCTTTGATGATGAGAAAGCGAAAGAGGTCGAAAAAACTGTGGACAAGGATGCAACTTTCAGTTATAAGTAG

Protein sequence

MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSRRATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK

Homology

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BLAST of Lag0019936 vs. NCBI nr
Match: XP_022141304.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 414.1 bits (1063), Expect = 8.2e-112
Identity = 213/234 (91.03%), Postives = 222/234 (94.87%), Query Frame = 0


Query: 1   MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSR 60
           MAATR+NSLS SQVPFSL TQSN Y LE KTLFLPVSPL +LKLAIKRS  TH VSKF+R
Sbjct: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPA++PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSG+ GEITTGHLLLGIWSEESAG KIL TLGFDDEKAKE+EK+VDKDATFSYK
Sbjct: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKSVDKDATFSYK 234

[Close]

BLAST of Lag0019936 vs. NCBI nr
Match: KAG6576777.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014811.1 ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 407.9 bits (1047), Expect = 5.8e-110
Identity = 212/234 (90.60%), Postives = 218/234 (93.16%), Query Frame = 0


Query: 1   MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSR 60
           MAATRMNSLS S VPFSLP QSN Y+LE KTLFLP SPLI L LAIKRS ATH VSKF+R
Sbjct: 1   MAATRMNSLSLSLVPFSLPAQSNCYSLEPKTLFLPASPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPAS+PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLL IWSEESAG KIL TLGFDDEKAKE+EKTVD DATFSYK
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDDEKAKEIEKTVDNDATFSYK 234

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BLAST of Lag0019936 vs. NCBI nr
Match: KAA0033572.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa] >TYK30329.1 ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa])

HSP 1 Score: 407.5 bits (1046), Expect = 7.6e-110
Identity = 209/234 (89.32%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSR 60
           MAATR+NSLS SQ+P SLP+QSN Y+LE K L  P++PLI+LKLAIKRS ATHPVSKF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPAS+PEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLLGIWSEESAG KIL TLGFDDEKAKE+ KTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

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BLAST of Lag0019936 vs. NCBI nr
Match: XP_023552673.1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 406.4 bits (1043), Expect = 1.7e-109
Identity = 211/234 (90.17%), Postives = 217/234 (92.74%), Query Frame = 0


Query: 1   MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSR 60
           MAATRMNSLS S VPFSLP QSN Y+LE KTLFLP SPLI L LAIKRS ATH VSKF+R
Sbjct: 1   MAATRMNSLSLSLVPFSLPAQSNCYSLEPKTLFLPASPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPAS+PEGVSP+KLPKWSARAIKSFAM ELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMGELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLL IWSEESAG KIL TLGFDDEKAKE+EKTVD DATFSYK
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDDEKAKEIEKTVDNDATFSYK 234

[Close]

BLAST of Lag0019936 vs. NCBI nr
Match: XP_008439115.1 (PREDICTED: ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 404.4 bits (1038), Expect = 6.5e-109
Identity = 208/234 (88.89%), Postives = 219/234 (93.59%), Query Frame = 0


Query: 1   MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSR 60
           MAATR+NSLS SQ+P SLP+QSN Y+LE K L  P++PLI+LKLAIKRS ATHPVSKF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPAS+PEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGKSDMYFFS EHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSSEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLLGIWSEESAG KIL TLGFDDEKAKE+ KTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Lag0019936 vs. ExPASy Swiss-Prot
Match: Q93WL3 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT1 PE=1 SV=1)

HSP 1 Score: 236.9 bits (603), Expect = 2.3e-61
Identity = 115/176 (65.34%), Postives = 147/176 (83.52%), Query Frame = 0


Query: 60  RRATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGI 119
           R  T+A+   ++P ++PE  S +K+PKWSARAIKS AM ELEARKLKYP+TGTEA+LMGI
Sbjct: 59  RCLTSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGI 118

Query: 120 LIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEK 179
           L+EGTS  A+FLR NG+TLFKVR+ET+ LLGKSDMYFFSPEHPPLTEPAQ+A+ WA+ EK
Sbjct: 119 LVEGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEK 178

Query: 180 LKSGQPGEITTGHLLLGIWSE-ESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
            KS   GE+TT +LLLG+WS+ +SAG +IL  LGF+++KAKEVEK++++D   S+K
Sbjct: 179 NKSDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFK 234

[Close]

BLAST of Lag0019936 vs. ExPASy Swiss-Prot
Match: Q8GW78 (ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLPT2 PE=1 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 3.5e-57
Identity = 128/200 (64.00%), Postives = 148/200 (74.00%), Query Frame = 0


Query: 29  QKTLFLPVSPLIDLKLAIKRSTATHPVSKFS----RRATTATVSFSLPASRPE-GVSPEK 88
           +K L  P   ++D  L++     T PVS       RR   + +S SLP + P+  VS  K
Sbjct: 37  RKALTNPWLGVVDSSLSL-----TSPVSALQTNRPRRIHKSAIS-SLPTANPDLVVSDAK 96

Query: 89  LPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVRE 148
            PKWS RAIKSFAM ELEARKLKYPNTGTEALLMGILIEGTS  ++FLRAN I L+KVRE
Sbjct: 97  KPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSFTSKFLRANKIMLYKVRE 156

Query: 149 ETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSE-ES 208
           ETVKLLGK+DMYFFSPEHPPLTE AQRALD A+ + LK+G  GE+   H+LLGIWSE ES
Sbjct: 157 ETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQNLKAGGIGEVMPAHILLGIWSEVES 216

Query: 209 AGHKILVTLGFDDEKAKEVE 223
            GHKIL TLGF DEK+KE+E
Sbjct: 217 PGHKILATLGFTDEKSKELE 230

[Close]

BLAST of Lag0019936 vs. ExPASy Swiss-Prot
Match: Q2QVG9 (Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=CLPC2 PE=2 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 1.5e-12
Identity = 61/185 (32.97%), Postives = 97/185 (52.43%), Query Frame = 0


Query: 31  TLFLPVSPLIDLKLAIKRSTATHPVSKFSRRATTATVSFSLPASRPEGVSPEKLPKWSAR 90
           +L  PV     + L    S +  PV+ F  R+T A+   S    R   V+     +++ +
Sbjct: 39  SLSRPVKMAAFVGLRSVHSFSVTPVTNF--RSTVASYR-SRRGRRARFVTRSMFERFTEK 98

Query: 91  AIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREETVKLLG 150
           AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E  K++G
Sbjct: 99  AIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIG 158

Query: 151 KSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSE-ESAGHKILV 210
           + +   F     P T  A+R L+ ++ E  + G    I + HLLLG+  E E    ++L 
Sbjct: 159 RGN--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGLLREGEGVAARVLE 217

Query: 211 TLGFD 215
           +LG D
Sbjct: 219 SLGAD 217

[Close]

BLAST of Lag0019936 vs. ExPASy Swiss-Prot
Match: P46523 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog, chloroplastic (Fragment) OS=Brassica napus OX=3708 GN=CLPA PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.6e-12
Identity = 49/138 (35.51%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 78  GVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGIT 137
           GV      +++ +AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI 
Sbjct: 36  GVVKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGIN 95

Query: 138 LFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGI 197
           L   R E  K++G+     F     P T  A+R L+ ++ E  + G    I + HLLLG+
Sbjct: 96  LKDARVEVEKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGL 155

Query: 198 WSE-ESAGHKILVTLGFD 215
             E E    ++L  LG D
Sbjct: 156 LREGEGVAARVLENLGAD 170

[Close]

BLAST of Lag0019936 vs. ExPASy Swiss-Prot
Match: P31541 (ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic OS=Solanum lycopersicum OX=4081 GN=CD4A PE=3 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.5e-12
Identity = 51/144 (35.42%), Postives = 78/144 (54.17%), Query Frame = 0


Query: 75  RPEG---VSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFL 134
           RP G   V      +++ +AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L
Sbjct: 82  RPRGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVL 141

Query: 135 RANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTG 194
           ++ GI L   R E  K++G+     F     P T  A+R L+ ++ E  + G    I + 
Sbjct: 142 KSMGINLKDARVEVEKIIGRGS--GFIAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSE 201

Query: 195 HLLLGIWSE-ESAGHKILVTLGFD 215
           HLLLG+  E E    ++L  LG D
Sbjct: 202 HLLLGLLREGEGVAARVLENLGAD 222

[Close]

BLAST of Lag0019936 vs. ExPASy TrEMBL
Match: A0A6J1CI79 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111011733 PE=4 SV=1)

HSP 1 Score: 414.1 bits (1063), Expect = 4.0e-112
Identity = 213/234 (91.03%), Postives = 222/234 (94.87%), Query Frame = 0


Query: 1   MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSR 60
           MAATR+NSLS SQVPFSL TQSN Y LE KTLFLPVSPL +LKLAIKRS  TH VSKF+R
Sbjct: 1   MAATRLNSLSLSQVPFSLATQSNCYNLEHKTLFLPVSPLFELKLAIKRSNVTHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPA++PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPATKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSG+ GEITTGHLLLGIWSEESAG KIL TLGFDDEKAKE+EK+VDKDATFSYK
Sbjct: 181 KSGESGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIEKSVDKDATFSYK 234

[Close]

BLAST of Lag0019936 vs. ExPASy TrEMBL
Match: A0A5D3E3F8 (ATP-dependent Clp protease ATP-binding subunit CLPT1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1044G00010 PE=4 SV=1)

HSP 1 Score: 407.5 bits (1046), Expect = 3.7e-110
Identity = 209/234 (89.32%), Postives = 220/234 (94.02%), Query Frame = 0


Query: 1   MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSR 60
           MAATR+NSLS SQ+P SLP+QSN Y+LE K L  P++PLI+LKLAIKRS ATHPVSKF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPAS+PEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLLGIWSEESAG KIL TLGFDDEKAKE+ KTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Lag0019936 vs. ExPASy TrEMBL
Match: A0A1S3AY13 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucumis melo OX=3656 GN=LOC103484006 PE=4 SV=1)

HSP 1 Score: 404.4 bits (1038), Expect = 3.1e-109
Identity = 208/234 (88.89%), Postives = 219/234 (93.59%), Query Frame = 0


Query: 1   MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSR 60
           MAATR+NSLS SQ+P SLP+QSN Y+LE K L  P++PLI+LKLAIKRS ATHPVSKF+R
Sbjct: 1   MAATRLNSLSFSQLPLSLPSQSNCYSLEHKPLLFPLTPLIELKLAIKRSNATHPVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RAT ATVSFSLPAS+PEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATAATVSFSLPASKPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGTS AA+FLRANGITLFKVREETVKLLGKSDMYFFS EHPPLTEPAQRALDWAVAEKL
Sbjct: 121 IEGTSTAAKFLRANGITLFKVREETVKLLGKSDMYFFSSEHPPLTEPAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLLGIWSEESAG KIL TLGFDDEKAKE+ KTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLGIWSEESAGRKILATLGFDDEKAKEIAKTVDKDATFSYK 234

[Close]

BLAST of Lag0019936 vs. ExPASy TrEMBL
Match: A0A6J1E4F8 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111430678 PE=4 SV=1)

HSP 1 Score: 403.7 bits (1036), Expect = 5.3e-109
Identity = 211/234 (90.17%), Postives = 217/234 (92.74%), Query Frame = 0


Query: 1   MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSR 60
           MAATRMNSLS S VP SLP QSN Y+LE KTLFLPVSPLI L LAIKRS ATH VSKF+R
Sbjct: 1   MAATRMNSLSLSLVPCSLPAQSNCYSLEPKTLFLPVSPLIQLNLAIKRSNATHSVSKFTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTATVSFSLPAS+PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTATVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLL IWSEESAG KIL TLGFD EKAKE+EKTVD DATFSYK
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDGEKAKEIEKTVDNDATFSYK 234

[Close]

BLAST of Lag0019936 vs. ExPASy TrEMBL
Match: A0A6J1J1K1 (ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111482587 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.5e-108
Identity = 209/234 (89.32%), Postives = 217/234 (92.74%), Query Frame = 0


Query: 1   MAATRMNSLSPSQVPFSLPTQSNRYTLEQKTLFLPVSPLIDLKLAIKRSTATHPVSKFSR 60
           MAATRMNSLS S VP SLP QSN Y+LE KTLFLPVSPLI L LAI+RS ATH +SK +R
Sbjct: 1   MAATRMNSLSLSLVPCSLPAQSNCYSLEPKTLFLPVSPLIQLNLAIERSNATHSISKSTR 60

Query: 61  RATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120
           RATTA VSFSLPAS+PEGVSP+KLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL
Sbjct: 61  RATTAIVSFSLPASKPEGVSPDKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGIL 120

Query: 121 IEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKL 180
           IEGT+IAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTE AQRALDWAVAEKL
Sbjct: 121 IEGTNIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTESAQRALDWAVAEKL 180

Query: 181 KSGQPGEITTGHLLLGIWSEESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
           KSGQ GEITTGHLLL IWSEESAG KIL TLGFDDEKAKE+EKTVDKDATFSYK
Sbjct: 181 KSGQSGEITTGHLLLAIWSEESAGRKILATLGFDDEKAKEIEKTVDKDATFSYK 234

[Close]

BLAST of Lag0019936 vs. TAIR 10
Match: AT4G25370.1 (Double Clp-N motif protein )

HSP 1 Score: 236.9 bits (603), Expect = 1.7e-62
Identity = 115/176 (65.34%), Postives = 147/176 (83.52%), Query Frame = 0


Query: 60  RRATTATVSFSLPASRPEGVSPEKLPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGI 119
           R  T+A+   ++P ++PE  S +K+PKWSARAIKS AM ELEARKLKYP+TGTEA+LMGI
Sbjct: 59  RCLTSASTVLNVPIAQPENGSSDKIPKWSARAIKSLAMGELEARKLKYPSTGTEAILMGI 118

Query: 120 LIEGTSIAARFLRANGITLFKVREETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEK 179
           L+EGTS  A+FLR NG+TLFKVR+ET+ LLGKSDMYFFSPEHPPLTEPAQ+A+ WA+ EK
Sbjct: 119 LVEGTSTVAKFLRGNGVTLFKVRDETLSLLGKSDMYFFSPEHPPLTEPAQKAIAWAIDEK 178

Query: 180 LKSGQPGEITTGHLLLGIWSE-ESAGHKILVTLGFDDEKAKEVEKTVDKDATFSYK 235
            KS   GE+TT +LLLG+WS+ +SAG +IL  LGF+++KAKEVEK++++D   S+K
Sbjct: 179 NKSDVDGELTTAYLLLGVWSQKDSAGRQILEKLGFNEDKAKEVEKSMNEDVDLSFK 234

[Close]

BLAST of Lag0019936 vs. TAIR 10
Match: AT4G12060.1 (Double Clp-N motif protein )

HSP 1 Score: 223.0 bits (567), Expect = 2.5e-58
Identity = 128/200 (64.00%), Postives = 148/200 (74.00%), Query Frame = 0


Query: 29  QKTLFLPVSPLIDLKLAIKRSTATHPVSKFS----RRATTATVSFSLPASRPE-GVSPEK 88
           +K L  P   ++D  L++     T PVS       RR   + +S SLP + P+  VS  K
Sbjct: 37  RKALTNPWLGVVDSSLSL-----TSPVSALQTNRPRRIHKSAIS-SLPTANPDLVVSDAK 96

Query: 89  LPKWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVRE 148
            PKWS RAIKSFAM ELEARKLKYPNTGTEALLMGILIEGTS  ++FLRAN I L+KVRE
Sbjct: 97  KPKWSWRAIKSFAMGELEARKLKYPNTGTEALLMGILIEGTSFTSKFLRANKIMLYKVRE 156

Query: 149 ETVKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSE-ES 208
           ETVKLLGK+DMYFFSPEHPPLTE AQRALD A+ + LK+G  GE+   H+LLGIWSE ES
Sbjct: 157 ETVKLLGKADMYFFSPEHPPLTEDAQRALDSALDQNLKAGGIGEVMPAHILLGIWSEVES 216

Query: 209 AGHKILVTLGFDDEKAKEVE 223
            GHKIL TLGF DEK+KE+E
Sbjct: 217 PGHKILATLGFTDEKSKELE 230

[Close]

BLAST of Lag0019936 vs. TAIR 10
Match: AT5G50920.1 (CLPC homologue 1 )

HSP 1 Score: 72.4 bits (176), Expect = 5.4e-13
Identity = 47/130 (36.15%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 86  KWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREET 145
           +++ +AIK   +A+ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E 
Sbjct: 97  RFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEV 156

Query: 146 VKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSE-ESAG 205
            K++G+     F     P T  A+R L+ ++ E  + G    I + HLLLG+  E E   
Sbjct: 157 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGLLREGEGVA 216

Query: 206 HKILVTLGFD 215
            ++L  LG D
Sbjct: 217 ARVLENLGAD 223

[Close]

BLAST of Lag0019936 vs. TAIR 10
Match: AT3G48870.1 (Clp ATPase )

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-12
Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 86  KWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREET 145
           +++ +AIK   +++ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E 
Sbjct: 117 RFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEV 176

Query: 146 VKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSE-ESAG 205
            K++G+     F     P T  A+R L+ ++ E  + G    I + HLLLG+  E E   
Sbjct: 177 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGLLREGEGVA 236

Query: 206 HKILVTLGFD 215
            ++L  LG D
Sbjct: 237 ARVLENLGAD 243

[Close]

BLAST of Lag0019936 vs. TAIR 10
Match: AT3G48870.2 (Clp ATPase )

HSP 1 Score: 70.5 bits (171), Expect = 2.1e-12
Identity = 46/130 (35.38%), Postives = 74/130 (56.92%), Query Frame = 0


Query: 86  KWSARAIKSFAMAELEARKLKYPNTGTEALLMGILIEGTSIAARFLRANGITLFKVREET 145
           +++ +AIK   +++ EAR+L +   GTE +L+G++ EGT IAA+ L++ GI L   R E 
Sbjct: 86  RFTEKAIKVIMLSQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDSRVEV 145

Query: 146 VKLLGKSDMYFFSPEHPPLTEPAQRALDWAVAEKLKSGQPGEITTGHLLLGIWSE-ESAG 205
            K++G+     F     P T  A+R L+ ++ E  + G    I + HLLLG+  E E   
Sbjct: 146 EKIIGRGS--GFVAVEIPFTPRAKRVLELSLEEARQLGH-NYIGSEHLLLGLLREGEGVA 205

Query: 206 HKILVTLGFD 215
            ++L  LG D
Sbjct: 206 ARVLENLGAD 212

The following BLAST results are available for this feature:

BLAST of Lag0019936 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022141304.1	8.2e-112	91.03	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Momord...	[more]
KAG6576777.1	5.8e-110	90.60	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic, partial [Cu...	[more]
KAA0033572.1	7.6e-110	89.32	ATP-dependent Clp protease ATP-binding subunit CLPT1 [Cucumis melo var. makuwa] ...	[more]
XP_023552673.1	1.7e-109	90.17	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like [Cucurb...	[more]
XP_008439115.1	6.5e-109	88.89	PREDICTED: ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-l...	[more]

BLAST of Lag0019936 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q93WL3	2.3e-61	65.34	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic OS=Arabidops...	[more]
Q8GW78	3.5e-57	64.00	ATP-dependent Clp protease ATP-binding subunit CLPT2, chloroplastic OS=Arabidops...	[more]
Q2QVG9	1.5e-12	32.97	Chaperone protein ClpC2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 ...	[more]
P46523	2.6e-12	35.51	ATP-dependent Clp protease ATP-binding subunit ClpA homolog, chloroplastic (Frag...	[more]
P31541	4.5e-12	35.42	ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4A, chloroplastic ...	[more]

BLAST of Lag0019936 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CI79	4.0e-112	91.03	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Momo...	[more]
A0A5D3E3F8	3.7e-110	89.32	ATP-dependent Clp protease ATP-binding subunit CLPT1 OS=Cucumis melo var. makuwa...	[more]
A0A1S3AY13	3.1e-109	88.89	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]
A0A6J1E4F8	5.3e-109	90.17	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]
A0A6J1J1K1	3.5e-108	89.32	ATP-dependent Clp protease ATP-binding subunit CLPT1, chloroplastic-like OS=Cucu...	[more]

BLAST of Lag0019936 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G25370.1	1.7e-62	65.34	Double Clp-N motif protein	[more]
AT4G12060.1	2.5e-58	64.00	Double Clp-N motif protein	[more]
AT5G50920.1	5.4e-13	36.15	CLPC homologue 1	[more]
AT3G48870.1	2.1e-12	35.38	Clp ATPase	[more]
AT3G48870.2	2.1e-12	35.38	Clp ATPase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036628	Clp, N-terminal domain superfamily	GENE3D	1.10.1780.10		coord: 86..232 e-value: 1.1E-42 score: 147.5
IPR036628	Clp, N-terminal domain superfamily	SUPERFAMILY	81923	Double Clp-N motif	coord: 86..218
IPR004176	Clp, repeat (R) domain	PFAM	PF02861	Clp_N	coord: 98..150 e-value: 4.4E-10 score: 39.5 coord: 187..223 e-value: 6.3E-4 score: 19.8
IPR004176	Clp, repeat (R) domain	PROSITE	PS51903	CLP_R	coord: 84..228 score: 30.453751
IPR044217	ATP-dependent Clp protease ATP-binding subunit CLPT1/2	PANTHER	PTHR47016	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC	coord: 11..234
None	No IPR available	PANTHER	PTHR47016:SF1	ATP-DEPENDENT CLP PROTEASE ATP-BINDING SUBUNIT CLPT1, CHLOROPLASTIC	coord: 11..234

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0019936.1	Lag0019936.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
cellular_component	GO:0009532	plastid stroma
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0008233	peptidase activity