Lag0018947 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACGTCGACGTATCTTCTATATGAATCTGCTTCTGGTTATGCTCTGTTTCATGCCCATGGCCTTGACGAAATTGGGCAGAACACTGAAGCCATTCGGAGCTCGGTCTCCGACCTCAACCGCTTTGGCAAGGTCGTGAAGCTTGCCGTTTTCCACCCGTTCGAGTTAGCTCTCGATGCACTCAAGCAATGCAACTCAGTGTCTGAAGGTAACCATCTCATGCACTCAATCCTCCATGCAGTCATTTGATTTTCAGTTATTTCAAGGATCTCAGATGATTTAATGTGCATTTTCACCATTTGAATTCAGAAAGTGTTTCTATATTTCAGTAAGTAGTTACTTTTTTACATTGTTCATGGTTATTTTGGTTCCTTGTTTAGGAAATGACTTGCTTGGTTGTTCCATTATGTGTTTGAAGTTAACTGTGGTGTATTTCTGTGTTTGA ATGACGTCGACGTATCTTCTATATGAATCTGCTTCTGGTTATGCTCTGTTTCATGCCCATGGCCTTGACGAAATTGGGCAGAACACTGAAGCCATTCGGAGCTCGGTCTCCGACCTCAACCGCTTTGGCAAGGTCGTGAAGCTTGCCGTTTTCCACCCGTTCGAGTTAGCTCTCGATGCACTCAAGCAATGCAACTCAGTGTCTGAAGGAAATGACTTGCTTGGTTGTTCCATTATGTGTTTGAAGTTAACTGTGGTGTATTTCTGTGTTTGA ATGACGTCGACGTATCTTCTATATGAATCTGCTTCTGGTTATGCTCTGTTTCATGCCCATGGCCTTGACGAAATTGGGCAGAACACTGAAGCCATTCGGAGCTCGGTCTCCGACCTCAACCGCTTTGGCAAGGTCGTGAAGCTTGCCGTTTTCCACCCGTTCGAGTTAGCTCTCGATGCACTCAAGCAATGCAACTCAGTGTCTGAAGGAAATGACTTGCTTGGTTGTTCCATTATGTGTTTGAAGTTAACTGTGGTGTATTTCTGTGTTTGA MTSTYLLYESASGYALFHAHGLDEIGQNTEAIRSSVSDLNRFGKVVKLAVFHPFELALDALKQCNSVSEGNDLLGCSIMCLKLTVVYFCV Homology
BLAST of Lag0018947 vs. NCBI nr
Match: XP_023516172.1 (nucleolar protein 56-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 139.0 bits (349), Expect = 1.9e-29 Identity = 68/70 (97.14%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lag0018947 vs. NCBI nr
Match: XP_004138057.1 (nucleolar protein 56 [Cucumis sativus] >KGN63494.1 hypothetical protein Csa_013064 [Cucumis sativus]) HSP 1 Score: 138.7 bits (348), Expect = 2.5e-29 Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lag0018947 vs. NCBI nr
Match: XP_022135070.1 (nucleolar protein 56-like [Momordica charantia]) HSP 1 Score: 138.7 bits (348), Expect = 2.5e-29 Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lag0018947 vs. NCBI nr
Match: XP_022921711.1 (nucleolar protein 56-like [Cucurbita moschata]) HSP 1 Score: 138.7 bits (348), Expect = 2.5e-29 Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lag0018947 vs. NCBI nr
Match: XP_022987378.1 (nucleolar protein 56-like [Cucurbita maxima]) HSP 1 Score: 138.7 bits (348), Expect = 2.5e-29 Identity = 67/70 (95.71%), Postives = 68/70 (97.14%), Query Frame = 0
BLAST of Lag0018947 vs. ExPASy Swiss-Prot
Match: O94514 (Nucleolar protein 56 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=nop56 PE=3 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.7e-12 Identity = 36/72 (50.00%), Postives = 50/72 (69.44%), Query Frame = 0
BLAST of Lag0018947 vs. ExPASy Swiss-Prot
Match: Q54MT2 (Nucleolar protein 56 OS=Dictyostelium discoideum OX=44689 GN=nop56 PE=3 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 2.0e-08 Identity = 25/68 (36.76%), Postives = 46/68 (67.65%), Query Frame = 0
BLAST of Lag0018947 vs. ExPASy Swiss-Prot
Match: Q21276 (Nucleolar protein 56 OS=Caenorhabditis elegans OX=6239 GN=nol-56 PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-07 Identity = 26/66 (39.39%), Postives = 42/66 (63.64%), Query Frame = 0
BLAST of Lag0018947 vs. ExPASy Swiss-Prot
Match: O00567 (Nucleolar protein 56 OS=Homo sapiens OX=9606 GN=NOP56 PE=1 SV=4) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-05 Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 0
BLAST of Lag0018947 vs. ExPASy Swiss-Prot
Match: Q95K50 (Nucleolar protein 56 OS=Macaca fascicularis OX=9541 GN=NOP56 PE=2 SV=1) HSP 1 Score: 50.1 bits (118), Expect = 1.6e-05 Identity = 26/70 (37.14%), Postives = 39/70 (55.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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