Lag0018729 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTTTGTCGCAAACCAATCGGGATTCGAGGACTGGCTGCCGACGATGGCGCAGAGGCTCGGCGGCGAGGGCCTGATTGGGGAGCTTTGCAATGGGTTCAATCTTCTGATGGACAGAGAGAAGGGGGTCATCGATTTCGAGAGCCTGAAGAGGAACGCCGCGGCGCTAGGGCTGGCGGATCTGAGCGATGACGATCTCAGAGCGATGTTGAGGGAGGGGGATTTCGACGGCGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTGATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGAGGCTCTAGGCCAACAGTTTAAGGATTTTTGTTGA ATGGCTTTTGTCGCAAACCAATCGGGATTCGAGGACTGGCTGCCGACGATGGCGCAGAGGCTCGGCGGCGAGGGCCTGATTGGGGAGCTTTGCAATGGGTTCAATCTTCTGATGGACAGAGAGAAGGGGGTCATCGATTTCGAGAGCCTGAAGAGGAACGCCGCGGCGCTAGGGCTGGCGGATCTGAGCGATGACGATCTCAGAGCGATGTTGAGGGAGGGGGATTTCGACGGCGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTGATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGAGGCTCTAGGCCAACAGTTTAAGGATTTTTGTTGA ATGGCTTTTGTCGCAAACCAATCGGGATTCGAGGACTGGCTGCCGACGATGGCGCAGAGGCTCGGCGGCGAGGGCCTGATTGGGGAGCTTTGCAATGGGTTCAATCTTCTGATGGACAGAGAGAAGGGGGTCATCGATTTCGAGAGCCTGAAGAGGAACGCCGCGGCGCTAGGGCTGGCGGATCTGAGCGATGACGATCTCAGAGCGATGTTGAGGGAGGGGGATTTCGACGGCGATGGCGCTCTCAATCAGATGGAGTTTTGTGTTCTGATGTTCAGATTGAGCCCTGAATTGATGGACGAGTCCTGGTTCTTGCTCGAGGAGGCTCTAGGCCAACAGTTTAAGGATTTTTGTTGA MAFVANQSGFEDWLPTMAQRLGGEGLIGELCNGFNLLMDREKGVIDFESLKRNAAALGLADLSDDDLRAMLREGDFDGDGALNQMEFCVLMFRLSPELMDESWFLLEEALGQQFKDFC Homology
BLAST of Lag0018729 vs. NCBI nr
Match: XP_038903612.1 (calcium-binding protein KRP1-like [Benincasa hispida]) HSP 1 Score: 231.1 bits (588), Expect = 4.9e-57 Identity = 110/118 (93.22%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of Lag0018729 vs. NCBI nr
Match: XP_008452312.1 (PREDICTED: calcium-binding protein PBP1 [Cucumis melo]) HSP 1 Score: 230.3 bits (586), Expect = 8.4e-57 Identity = 110/118 (93.22%), Postives = 115/118 (97.46%), Query Frame = 0
BLAST of Lag0018729 vs. NCBI nr
Match: XP_022929391.1 (calcium-binding protein PBP1-like [Cucurbita moschata] >XP_023552392.1 calcium-binding protein PBP1 [Cucurbita pepo subsp. pepo] >KAG6577399.1 Calcium-binding protein KRP1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015477.1 Calcium-binding protein PBP1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 226.1 bits (575), Expect = 1.6e-55 Identity = 108/118 (91.53%), Postives = 113/118 (95.76%), Query Frame = 0
BLAST of Lag0018729 vs. NCBI nr
Match: XP_004149304.1 (calcium-binding protein KRP1 [Cucumis sativus] >KGN56198.1 hypothetical protein Csa_010363 [Cucumis sativus]) HSP 1 Score: 225.3 bits (573), Expect = 2.7e-55 Identity = 107/118 (90.68%), Postives = 114/118 (96.61%), Query Frame = 0
BLAST of Lag0018729 vs. NCBI nr
Match: XP_022985275.1 (calcium-binding protein PBP1 [Cucurbita maxima]) HSP 1 Score: 220.3 bits (560), Expect = 8.7e-54 Identity = 106/117 (90.60%), Postives = 111/117 (94.87%), Query Frame = 0
BLAST of Lag0018729 vs. ExPASy Swiss-Prot
Match: O81831 (Calcium-binding protein KRP1 OS=Arabidopsis thaliana OX=3702 GN=KRP1 PE=2 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 1.1e-38 Identity = 79/109 (72.48%), Postives = 92/109 (84.40%), Query Frame = 0
BLAST of Lag0018729 vs. ExPASy Swiss-Prot
Match: Q9LSQ6 (Calcium-binding protein PBP1 OS=Arabidopsis thaliana OX=3702 GN=PBP1 PE=1 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 5.5e-35 Identity = 71/106 (66.98%), Postives = 88/106 (83.02%), Query Frame = 0
BLAST of Lag0018729 vs. ExPASy Swiss-Prot
Match: Q9ZPX9 (Calcium-binding protein KIC OS=Arabidopsis thaliana OX=3702 GN=KIC PE=1 SV=2) HSP 1 Score: 119.8 bits (299), Expect = 2.1e-26 Identity = 56/107 (52.34%), Postives = 79/107 (73.83%), Query Frame = 0
BLAST of Lag0018729 vs. ExPASy Swiss-Prot
Match: Q2TBN3 (Centrin-2 OS=Bos taurus OX=9913 GN=CETN2 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 8.0e-10 Identity = 35/86 (40.70%), Postives = 51/86 (59.30%), Query Frame = 0
BLAST of Lag0018729 vs. ExPASy Swiss-Prot
Match: Q9R1K9 (Centrin-2 OS=Mus musculus OX=10090 GN=Cetn2 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.8e-09 Identity = 34/86 (39.53%), Postives = 51/86 (59.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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