Lag0018649 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0018649
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionULP_PROTEASE domain-containing protein
Locationchr5: 31708183 .. 31709105 (+)
RNA-Seq ExpressionLag0018649
SyntenyLag0018649
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACCAAGAAGGAAGAAATTGTTAATGTGTCAACATCCAATTTGCTAATGTCTTTGAAGTTTATTCTCAGGTTTGCTGAAAAGGTAATGCCCAATGACACCGATATTTCCTTTCAACTACCTGTTGAGCTTTTTGGTTTCAGTCGAAAGAGTTGTATCTTGCGAGAAGATATAATTGACGTTTGCGACATGCAACAAGTTAAGACAATATCAATGGTGGCTTATATGGCGTAAGTAACATTATTCAGTTATGATTGATCATATTTAGTAGTTAAGACTTATTTTCGTATTAACTAAGTACATATCTAATCTTTTGTAGGTACTTATACTCATACTTTATTGATCCAAAGCAAGTTTCACAGTACGTTTTTGGAGACCCATCTCTTATATCTACTGGACAAAACACTCCAGAAATTAGAGCTCGAAACCTTTGTAGCAGATTGATGACTTCAAAACAAAATCAATTAGTTCTTGCTCCTTATAATCCAGGGTAAGTAAAGTTTTAGTCATCTCAAACTTCCATTAGTGAAAACAACTAATTAGTTGTATTTTATGTAATTAGCTGTCATTAGGCACTAATTGTTATCAACGCATACGATGATATGATCTATCATATCGACTCATTAAGAACAAGTTCTCGAACAAACATCAAATATGTAACAGACATGTAAGTTTTTTTTTTCTTTTTTGTTGTTTAGCTTGTCTTAACGATTACTTCATTTTGTAATTTTGTGGTTATATTTTGACAATCATAGGGCAATATCAAATTTTCAATCTTAGAAGAATTTGAACAAAACTCGGAAATCGACATTATGGAGAACAGTAAAGACAAGTATAAACATTATTAAACTTATTTTACACGTCTAGTGCACGTATGTAACATAAATTACTTGTTTTGGAATTGCAGTGCTCTTTACAAGTGA

mRNA sequence

ATGACCAAGAAGGAAGAAATTGTTAATGTGTCAACATCCAATTTGCTAATGTCTTTGAAGTTTATTCTCAGGTTTGCTGAAAAGGTAATGCCCAATGACACCGATATTTCCTTTCAACTACCTGTTGAGCTTTTTGGTTTCAGTCGAAAGAGTTGTATCTTGCGAGAAGATATAATTGACGTTTGCGACATGCAACAAGTTAAGACAATATCAATGGTGGCTTATATGGCGTACTTATACTCATACTTTATTGATCCAAAGCAAGTTTCACAGTACGTTTTTGGAGACCCATCTCTTATATCTACTGGACAAAACACTCCAGAAATTAGAGCTCGAAACCTTTGTAGCAGATTGATGACTTCAAAACAAAATCAATTAGTTCTTGCTCCTTATAATCCAGGTGCTCTTTACAAGTGA

Coding sequence (CDS)

ATGACCAAGAAGGAAGAAATTGTTAATGTGTCAACATCCAATTTGCTAATGTCTTTGAAGTTTATTCTCAGGTTTGCTGAAAAGGTAATGCCCAATGACACCGATATTTCCTTTCAACTACCTGTTGAGCTTTTTGGTTTCAGTCGAAAGAGTTGTATCTTGCGAGAAGATATAATTGACGTTTGCGACATGCAACAAGTTAAGACAATATCAATGGTGGCTTATATGGCGTACTTATACTCATACTTTATTGATCCAAAGCAAGTTTCACAGTACGTTTTTGGAGACCCATCTCTTATATCTACTGGACAAAACACTCCAGAAATTAGAGCTCGAAACCTTTGTAGCAGATTGATGACTTCAAAACAAAATCAATTAGTTCTTGCTCCTTATAATCCAGGTGCTCTTTACAAGTGA

Protein sequence

MTKKEEIVNVSTSNLLMSLKFILRFAEKVMPNDTDISFQLPVELFGFSRKSCILREDIIDVCDMQQVKTISMVAYMAYLYSYFIDPKQVSQYVFGDPSLISTGQNTPEIRARNLCSRLMTSKQNQLVLAPYNPGALYK
Homology
[Close]
BLAST of Lag0018649 vs. NCBI nr
Match: TYK01269.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 91/134 (67.91%), Postives = 112/134 (83.58%), Query Frame = 0 

Query: 1   MTKKEEIVNVSTSNLLMSLKFILRFAEKVMPNDTDISFQLPVELFGFSRKSCILREDIID 60
           MTK+ E+ +   SNL + LK+ILR+AE+VM + +  SFQLP+ELFG SRKS +LRED+ID
Sbjct: 198 MTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVID 257

Query: 61  VCDMQQVKTISMVAYMAYLYSYFIDPKQVSQYVFGDPSLISTGQNTPEIRARNLCSRLMT 120
            C+MQ+VKT+SMVAY+ YLYS  ID K+VS+YVF DPSLIS G +T EIRARNLCSRLMT
Sbjct: 258 FCNMQKVKTLSMVAYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMT 317

Query: 121 SKQNQLVLAPYNPG 135
           SKQ+QLV+APYNPG
Sbjct: 318 SKQDQLVVAPYNPG 330

[Close]
BLAST of Lag0018649 vs. NCBI nr
Match: TYK22869.1 (hypothetical protein E5676_scaffold334G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 91/134 (67.91%), Postives = 112/134 (83.58%), Query Frame = 0 

Query: 1    MTKKEEIVNVSTSNLLMSLKFILRFAEKVMPNDTDISFQLPVELFGFSRKSCILREDIID 60
            MTK+ E+ +   SNL + LK+ILR+AE+VM + +  SFQLP+ELFG SRKS +LRED+ID
Sbjct: 1312 MTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVID 1371

Query: 61   VCDMQQVKTISMVAYMAYLYSYFIDPKQVSQYVFGDPSLISTGQNTPEIRARNLCSRLMT 120
             C+MQ+VKT+SMVAY+ YLYS  ID K+VS+YVF DPSLIS G +T EIRARNLCSRLMT
Sbjct: 1372 FCNMQKVKTLSMVAYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMT 1431

Query: 121  SKQNQLVLAPYNPG 135
            SKQ+QLV+APYNPG
Sbjct: 1432 SKQDQLVVAPYNPG 1444

[Close]
BLAST of Lag0018649 vs. NCBI nr
Match: TYK18940.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 91/134 (67.91%), Postives = 112/134 (83.58%), Query Frame = 0 

Query: 1    MTKKEEIVNVSTSNLLMSLKFILRFAEKVMPNDTDISFQLPVELFGFSRKSCILREDIID 60
            MTK+ E+ +   SNL + LK+ILR+AE+VM + +  SFQLP+ELFG SRKS +LRED+ID
Sbjct: 1315 MTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVID 1374

Query: 61   VCDMQQVKTISMVAYMAYLYSYFIDPKQVSQYVFGDPSLISTGQNTPEIRARNLCSRLMT 120
             C+MQ+VKT+SMVAY+ YLYS  ID K+VS+YVF DPSLIS G +T EIRARNLCSRLMT
Sbjct: 1375 FCNMQKVKTLSMVAYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMT 1434

Query: 121  SKQNQLVLAPYNPG 135
            SKQ+QLV+APYNPG
Sbjct: 1435 SKQDQLVVAPYNPG 1447

[Close]
BLAST of Lag0018649 vs. NCBI nr
Match: TYK22670.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 91/134 (67.91%), Postives = 112/134 (83.58%), Query Frame = 0 

Query: 1    MTKKEEIVNVSTSNLLMSLKFILRFAEKVMPNDTDISFQLPVELFGFSRKSCILREDIID 60
            MTK+ E+ +   SNL + LK+ILR+AE+VM + +  SFQLP+ELFG SRKS +LRED+ID
Sbjct: 1187 MTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVID 1246

Query: 61   VCDMQQVKTISMVAYMAYLYSYFIDPKQVSQYVFGDPSLISTGQNTPEIRARNLCSRLMT 120
             C+MQ+VKT+SMVAY+ YLYS  ID K+VS+YVF DPSLIS G +T EIRARNLCSRLMT
Sbjct: 1247 FCNMQKVKTLSMVAYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMT 1306

Query: 121  SKQNQLVLAPYNPG 135
            SKQ+QLV+APYNPG
Sbjct: 1307 SKQDQLVVAPYNPG 1319

[Close]
BLAST of Lag0018649 vs. NCBI nr
Match: TYK01009.1 (transposase [Cucumis melo var. makuwa])

HSP 1 Score: 180.3 bits (456), Expect = 1.2e-41
Identity = 91/134 (67.91%), Postives = 112/134 (83.58%), Query Frame = 0 

Query: 1    MTKKEEIVNVSTSNLLMSLKFILRFAEKVMPNDTDISFQLPVELFGFSRKSCILREDIID 60
            MTK+ E+ +   SNL + LK+ILR+AE+VM + +  SFQLP+ELFG SRKS +LRED+ID
Sbjct: 1085 MTKEVEVTS-EPSNLPIQLKYILRYAERVMVDGSSFSFQLPLELFGISRKSYVLREDVID 1144

Query: 61   VCDMQQVKTISMVAYMAYLYSYFIDPKQVSQYVFGDPSLISTGQNTPEIRARNLCSRLMT 120
             C+MQ+VKT+SMVAY+ YLYS  ID K+VS+YVF DPSLIS G +T EIRARNLCSRLMT
Sbjct: 1145 FCNMQKVKTLSMVAYITYLYSLIIDLKKVSKYVFVDPSLISAGHSTREIRARNLCSRLMT 1204

Query: 121  SKQNQLVLAPYNPG 135
            SKQ+QLV+APYNPG
Sbjct: 1205 SKQDQLVVAPYNPG 1217

The following BLAST results are available for this feature:
BLAST of Lag0018649 vs. NCBI nr
Match NameE-valueIdentityDescription
TYK01269.11.2e-4167.91transposase [Cucumis melo var. makuwa][more]
TYK22869.11.2e-4167.91hypothetical protein E5676_scaffold334G00040 [Cucumis melo var. makuwa][more]
TYK18940.11.2e-4167.91transposase [Cucumis melo var. makuwa][more]
TYK22670.11.2e-4167.91transposase [Cucumis melo var. makuwa][more]
TYK01009.11.2e-4167.91transposase [Cucumis melo var. makuwa][more]
BLAST of Lag0018649 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0018649.1Lag0018649.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0008234 cysteine-type peptidase activity