Lag0018477 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0018477
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	DBD_Tnp_Mut domain-containing protein
Location	chr5: 27998253 .. 27998863 (+)
RNA-Seq Expression	Lag0018477
Synteny	Lag0018477

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATTCCTCCCTAGTCTTAACTACATTGGTGGAAGCCAAGCCGTTATTCGAGGGATAGATTATGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTAACTGATCTTAATGTATTCAACGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTATCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGGTTAGTATAGTTCCTGAAAGTAGACTTATCCACATTTATGTTGAACATAATCCGAACATTGAAGTTTTTGACCTAACTGAACCTGTTGCAATAGAAAGACCAATTTTTTTTTGGAGTGGCGACCTAGTGCTCAACAAAACCCTGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGATTGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATAATATCAATGTCAATGTGGCTGAAGATGATGTAGATTCAGATATTGGGTCATATTCGAATCTCCATACACCTATAGGGTCTGACGAAGAAGAAGATGTTAGGGGTCCTAAATATAGGGCTGAGACGGATATGAACTAG

mRNA sequence

ATGGTATTCCTCCCTAGTCTTAACTACATTGGTGGAAGCCAAGCCGTTATTCGAGGGATAGATTATGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTAACTGATCTTAATGTATTCAACGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTATCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGACCAATTTTTTTTTGGAGTGGCGACCTAGTGCTCAACAAAACCCTGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGATTGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATAATATCAATGTCAATGTGGCTGAAGATGATGTAGATTCAGATATTGGGTCATATTCGAATCTCCATACACCTATAGGGTCTGACGAAGAAGAAGATGTTAGGGGTCCTAAATATAGGGCTGAGACGGATATGAACTAG

Coding sequence (CDS)

ATGGTATTCCTCCCTAGTCTTAACTACATTGGTGGAAGCCAAGCCGTTATTCGAGGGATAGATTATGATAGGGTCTCGTTGATAGAGTTACGCATGATGTTAACTGATCTTAATGTATTCAACGTTGAGGAGTTTTATTATGTTAGGCCTGGGTATACACTATCTACTGGGTTCAAGGTCTTGTTAACTGATGCTGATGTCGTACAAATGACCAATTTTTTTTTGGAGTGGCGACCTAGTGCTCAACAAAACCCTGTTCAAAACCAAGTAGAATTGGATGACTTTGTTGAGGTAGAAGTGTCTGGAGAGTCTTCTTTAAGTGATAGTGATTGTGCAAGTTCTTCTCTGTCTAGAGAGTCTATTGCTTCACTGAATAATATCAATGTCAATGTGGCTGAAGATGATGTAGATTCAGATATTGGGTCATATTCGAATCTCCATACACCTATAGGGTCTGACGAAGAAGAAGATGTTAGGGGTCCTAAATATAGGGCTGAGACGGATATGAACTAG

Protein sequence

MVFLPSLNYIGGSQAVIRGIDYDRVSLIELRMMLTDLNVFNVEEFYYVRPGYTLSTGFKVLLTDADVVQMTNFFLEWRPSAQQNPVQNQVELDDFVEVEVSGESSLSDSDCASSSLSRESIASLNNINVNVAEDDVDSDIGSYSNLHTPIGSDEEEDVRGPKYRAETDMN

Homology

The following BLAST results are available for this feature:

BLAST of Lag0018477 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0018477 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..170
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 150..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0018477.1	Lag0018477.1	mRNA