Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exon CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTCTCCATAAGCGCGAACCCATCAAGTTCGTCGATGAGCCGATCCCACTACCACACCCACAAGCTCTTCCTCTACTCCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATCTTCCTCACCCTCTCCCTCCGCCTCCTCCCTTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCGCCATGGCCTCCGCCGCCTCCGCCCGCTGGTTCGGAGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAGGGGTCGGTAGCGGTGCTGGTGTACACCAGAACAGGGGACTTTCTCGCCGAGCTGAAGTCGTACGTGCGAGAGGAGGACGGGGCGGTGATTCTGAAGCTGGCCGGCGGGCTGAGCGTGGCCATGTTCGTGCTGGAGTGGGTGGTTCTGACGTTGGCCTTCTTCTTGAAGTATTATGCGTTTATTGAAGGGGAGGGCGCCGGCTCTGGCGTAGCCATGAGGAGTGCGAAGGTTCAGCAGGAGGAGGACTTGAAGGACTGGCCTTGGCCGTTTCAAGTTTGA mRNA sequence
ATGGGTTTCTCCATAAGCGCGAACCCATCAAGTTCGTCGATGAGCCGATCCCACTACCACACCCACAAGCTCTTCCTCTACTCCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATCTTCCTCACCCTCTCCCTCCGCCTCCTCCCTTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCGCCATGGCCTCCGCCGCCTCCGCCCGCTGGTTCGGAGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAGGGGTCGGTAGCGGTGCTGGTGTACACCAGAACAGGGGACTTTCTCGCCGAGCTGAAGTCGTACGTGCGAGAGGAGGACGGGGCGGTGATTCTGAAGCTGGCCGGCGGGCTGAGCGTGGCCATGTTCGTGCTGGAGTGGGTGGTTCTGACGTTGGCCTTCTTCTTGAAGTATTATGCGTTTATTGAAGGGGAGGGCGCCGGCTCTGGCGTAGCCATGAGGAGTGCGAAGGTTCAGCAGGAGGAGGACTTGAAGGACTGGCCTTGGCCGTTTCAAGTTTGA Coding sequence (CDS)
ATGGGTTTCTCCATAAGCGCGAACCCATCAAGTTCGTCGATGAGCCGATCCCACTACCACACCCACAAGCTCTTCCTCTACTCCAACTACGTCCTCCTCGGCGCCGCCTCCAGCTGCATCTTCCTCACCCTCTCCCTCCGCCTCCTCCCTTCTCTCTGCGGCCTCTCCCTCATCTTCCTCCACATCCTCACCATCGCCGCCGCCGTCTCCGGCTGCGCCATGGCCTCCGCCGCCTCCGCCCGCTGGTTCGGAGTCCACATGGTCTTCACCGTCCTCACCGCCATCTTCCAGGGGTCGGTAGCGGTGCTGGTGTACACCAGAACAGGGGACTTTCTCGCCGAGCTGAAGTCGTACGTGCGAGAGGAGGACGGGGCGGTGATTCTGAAGCTGGCCGGCGGGCTGAGCGTGGCCATGTTCGTGCTGGAGTGGGTGGTTCTGACGTTGGCCTTCTTCTTGAAGTATTATGCGTTTATTGAAGGGGAGGGCGCCGGCTCTGGCGTAGCCATGAGGAGTGCGAAGGTTCAGCAGGAGGAGGACTTGAAGGACTGGCCTTGGCCGTTTCAAGTTTGA Protein sequence
MGFSISANPSSSSMSRSHYHTHKLFLYSNYVLLGAASSCIFLTLSLRLLPSLCGLSLIFLHILTIAAAVSGCAMASAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLAELKSYVREEDGAVILKLAGGLSVAMFVLEWVVLTLAFFLKYYAFIEGEGAGSGVAMRSAKVQQEEDLKDWPWPFQV
Homology
BLAST of Lag0017798 vs. NCBI nr
Match:
XP_038904159.1 (uncharacterized protein LOC120090516 [Benincasa hispida])
HSP 1 Score: 328.2 bits (840), Expect = 4.8e-86
Identity = 174/191 (91.10%), Postives = 184/191 (96.34%), Query Frame = 0
Query: 1 MGFSISANPSSSSMSRSHYHTHKLFLYSNYVLLGAASSCIFLTLSLRLLPSLCGLSLIFL 60 MGFSI+ANP S+SMSRSHYHTHKLFLY+NY+LLGAASSCIFLTLSLRLLPSLCGLSLIFL Sbjct: 1 MGFSITANP-STSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIFL 60 Query: 61 HILTIAAAVSGCAMASAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLAELKSYVR 120 HILTIAAAVSGCAMA+AASARWFGVHMVFTVLTAIFQGSVA+LV+TRTGDFL ELKSYVR Sbjct: 61 HILTIAAAVSGCAMAAAASARWFGVHMVFTVLTAIFQGSVAMLVFTRTGDFLWELKSYVR 120 Query: 121 EEDGAVILKLAGGLSVAMFVLEWVVLTLAFFLKYYAFIEGEGAGS--GVAMRSAKVQQEE 180 EEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAF+EGEG+ S GV MRSAKVQQ+E Sbjct: 121 EEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEGEGSNSSNGVGMRSAKVQQDE 180 Query: 181 DLKDWPWPFQV 190 DLKDWPWPFQV Sbjct: 181 DLKDWPWPFQV 190
BLAST of Lag0017798 vs. NCBI nr
Match:
XP_023540529.1 (uncharacterized protein LOC111800866 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 173/193 (89.64%), Postives = 181/193 (93.78%), Query Frame = 0
Query: 1 MGFSISANP-SSSSMSRSHYHTHKLFLYSNYVLLGAASSCIFLTLSLRLLPSLCGLSLIF 60 MGFSIS +P SS+SMSRSHYHTHKLFLY+NY+LLGAASSCIFLTLSLRLLPSLCGLSLIF Sbjct: 1 MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60 Query: 61 LHILTIAAAVSGCAMASAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLAELKSYV 120 LHILTIAAAVSGCAMAS AS RWFG+HMVFTVLTAIFQGSVAVLVYTRTGDFL ELKSYV Sbjct: 61 LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120 Query: 121 REEDGAVILKLAGGLSVAMFVLEWVVLTLAFFLKYYAFIEGEGAGSG---VAMRSAKVQQ 180 REEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAF+EG G GSG AMRSAKV+Q Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEG-GGGSGNGAAAMRSAKVEQ 180 Query: 181 EEDLKDWPWPFQV 190 +EDLKDWPWPFQV Sbjct: 181 DEDLKDWPWPFQV 192
BLAST of Lag0017798 vs. NCBI nr
Match:
XP_022958196.1 (uncharacterized protein LOC111459467 [Cucurbita moschata] >KAG7028304.1 hypothetical protein SDJN02_09485, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 173/193 (89.64%), Postives = 181/193 (93.78%), Query Frame = 0
Query: 1 MGFSISANP-SSSSMSRSHYHTHKLFLYSNYVLLGAASSCIFLTLSLRLLPSLCGLSLIF 60 MGFSIS +P SS+SMSRSHYHTHKLFLY+NY+LLGAASSCIFLTLSLRLLPSLCGLSLIF Sbjct: 1 MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60 Query: 61 LHILTIAAAVSGCAMASAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLAELKSYV 120 LHILTIAAAVSGCAMAS AS RWFG+HMVFTVLTAIFQGSVAVLVYTRTGDFL ELKSYV Sbjct: 61 LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120 Query: 121 REEDGAVILKLAGGLSVAMFVLEWVVLTLAFFLKYYAFIEGEGAGSG---VAMRSAKVQQ 180 REEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAF+EG G GSG AMRSAKV+Q Sbjct: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEG-GGGSGNGAAAMRSAKVEQ 180 Query: 181 EEDLKDWPWPFQV 190 +EDLKDWPWPFQV Sbjct: 181 DEDLKDWPWPFQV 192
BLAST of Lag0017798 vs. NCBI nr
Match:
XP_023005568.1 (uncharacterized protein LOC111498512 [Cucurbita maxima])
HSP 1 Score: 321.6 bits (823), Expect = 4.5e-84
Identity = 173/193 (89.64%), Postives = 180/193 (93.26%), Query Frame = 0
Query: 1 MGFSISANP-SSSSMSRSHYHTHKLFLYSNYVLLGAASSCIFLTLSLRLLPSLCGLSLIF 60 MGFSIS +P SS+SMSRSHYHTHKLFLY+NY+LLGAASSCIFLTLSLRLLPSLCGLSLIF Sbjct: 1 MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60 Query: 61 LHILTIAAAVSGCAMASAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLAELKSYV 120 LHILTIAAAVSGCAMAS AS RWFG HMVFTVLTAIFQGSVAVLVYTRTGDFL ELKSYV Sbjct: 61 LHILTIAAAVSGCAMASTASGRWFGTHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120 Query: 121 REEDGAVILKLAGGLSVAMFVLEWVVLTLAFFLKYYAFIEGEGAGSG---VAMRSAKVQQ 180 REEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAF+EG G GSG AMRSAKV+Q Sbjct: 121 REEDGAVILKLAGGLSVVMFVLEWVVLTLAFFLKYYAFVEG-GGGSGNGAAAMRSAKVEQ 180 Query: 181 EEDLKDWPWPFQV 190 +EDLKDWPWPFQV Sbjct: 181 DEDLKDWPWPFQV 192
BLAST of Lag0017798 vs. NCBI nr
Match:
KAG6596776.1 (hypothetical protein SDJN03_09956, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 320.9 bits (821), Expect = 7.6e-84
Identity = 172/192 (89.58%), Postives = 180/192 (93.75%), Query Frame = 0
Query: 1 MGFSISANP-SSSSMSRSHYHTHKLFLYSNYVLLGAASSCIFLTLSLRLLPSLCGLSLIF 60 MGFSIS +P SS+SMSRSHYHTHKLFLY+NY+LLGAASSCIFLTLSLRLLPSLCGLSLIF Sbjct: 1 MGFSISGHPQSSTSMSRSHYHTHKLFLYTNYILLGAASSCIFLTLSLRLLPSLCGLSLIF 60 Query: 61 LHILTIAAAVSGCAMASAASARWFGVHMVFTVLTAIFQGSVAVLVYTRTGDFLAELKSYV 120 LHILTIAAAVSGCAMAS AS RWFG+HMVFTVLTAIFQGSVAVLVYTRTGDFL ELKSYV Sbjct: 61 LHILTIAAAVSGCAMASTASGRWFGIHMVFTVLTAIFQGSVAVLVYTRTGDFLGELKSYV 120 Query: 121 REEDGAVILKLAGGLSVAMFVLEWVVLTLAFFLKYYAFIEGEGAGSG---VAMRSAKVQQ 180 REEDGAVILKLAGGLSV MFVLEWVVLTLAFFLKYYAF+EG G GSG AMRSAKV+Q Sbjct: 121 REEDGAVILKLAGGLSVTMFVLEWVVLTLAFFLKYYAFVEG-GGGSGNGAAAMRSAKVEQ 180 Query: 181 EEDLKDWPWPFQ 189 +EDLKDWPWPFQ Sbjct: 181 DEDLKDWPWPFQ 191
The following BLAST results are available for this feature:
Match Name E-value Identity Description
XP_038904159.1 4.8e-86 91.10 uncharacterized protein LOC120090516 [Benincasa hispida] [more]
XP_023540529.1 2.0e-84 89.64 uncharacterized protein LOC111800866 [Cucurbita pepo subsp. pepo] [more]
XP_022958196.1 2.0e-84 89.64 uncharacterized protein LOC111459467 [Cucurbita moschata] >KAG7028304.1 hypothet... [more]
XP_023005568.1 4.5e-84 89.64 uncharacterized protein LOC111498512 [Cucurbita maxima] [more]
KAG6596776.1 7.6e-84 89.58 hypothetical protein SDJN03_09956, partial [Cucurbita argyrosperma subsp. sorori... [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G G G T T T C T C C A T A A G C G C G A A C C C A T C A A G T T C G T C G A T G A G C C G A T C C C A C T A C C A C A C C C A C A A G C T C T T C C T C T A C T C C A A C T A C G T C C T C C T C G G C G C C G C C T C C A G C T G C A T C T T C C T C A C C C T C T C C C T C C G C C T C C T C C C T T C T C T C T G C G G C C T C T C C C T C A T C T T C C T C C A C A T C C T C A C C A T C G C C G C C G C C G T C T C C G G C T G C G C C A T G G C C T C C G C C G C C T C C G C C C G C T G G T T C G G A G T C C A C A T G G T C T T C A C C G T C C T C A C C G C C A T C T T C C A G G G G T C G G T A G C G G T G C T G G T G T A C A C C A G A A C A G G G G A C T T T C T C G C C G A G C T G A A G T C G T A C G T G C G A G A G G A G G A C G G G G C G G T G A T T C T G A A G C T G G C C G G C G G G C T G A G C G T G G C C A T G T T C G T G C T G G A G T G G G T G G T T C T G A C G T T G G C C T T C T T C T T G A A G T A T T A T G C G T T T A T T G A A G G G G A G G G C G C C G G C T C T G G C G T A G C C A T G A G G A G T G C G A A G G T T C A G C A G G A G G A G G A C T T G A A G G A C T G G C C T T G G C C G T T T C A A G T T T G A 50 100 150 200 250 300 350 400 450 500 550 Score = Score = Sequence PTHR34124 PTHR34124:SF2
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available PANTHER PTHR34124 F16B3.27 PROTEIN-RELATED coord: 5..189
None No IPR available PANTHER PTHR34124:SF2 F16B3.27 PROTEIN-RELATED coord: 5..189
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category
Term Accession
Term Name
cellular_component
GO:0016021
integral component of membrane