Homology
BLAST of Lag0017663 vs. NCBI nr
Match:
KAA0048297.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 606.3 bits (1562), Expect = 2.8e-169
Identity = 331/591 (56.01%), Postives = 412/591 (69.71%), Query Frame = 0
Query: 1 MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQ 60
MSE+IL+QM+HC S K IW L IF++R LAQ M+ K KL I+KG M LKEYF KI Q
Sbjct: 106 MSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQ 165
Query: 61 YVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNE 120
VDAL+++ KPV +DHIL+IL+GLGSDY+SM+SVISA+ SV EVMSLLLTQE++NE
Sbjct: 166 CVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNE 225
Query: 121 SKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTW 180
SKL SETALPSVN+ +ES + N N Y ++ + RG G G SNRG R
Sbjct: 226 SKL-ISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRG-GRGNGRSNRGRR-- 285
Query: 181 NNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLT 240
NRN+ QCQ+C K G++A RC+FRY P +N + +SP H N PQM+AM+
Sbjct: 286 GNRNKPQCQICAKLGYSADRCFFRYT---PRSNSSGYSPNSHNTSYTNMNNHPQMSAMVA 345
Query: 241 APDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP 300
A D+N D++WYPDSGATNHLTHS NLS+G+EYGGGNQ++ NG+GLPI +YG SF+S
Sbjct: 346 ALDLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSS 405
Query: 301 TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLH 360
T + F LNNLL VPSITKNLISVSQFA+DN VFFEFHPTLCYVKD +G+VLLQG L+
Sbjct: 406 TLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLN 465
Query: 361 EGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAI 420
+GLY+F + PS ++ + + + + S T L L++WHRRL HP L I
Sbjct: 466 DGLYKFTIE-PSHKRLHHSNSNTKPVFNTVVPKSNTPL-------LDLWHRRLGHPHLPI 525
Query: 421 VKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPS 480
VK+VL N FC ACALGK H+LPF S T+Y+ PLQLI DLWGPA S
Sbjct: 526 VKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAVNVS 585
Query: 481 VSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFK 540
+G+RYYI+FVD +SRYTWIYFL SKSDA F KFK VE LG SIK+ Q+D G EFK
Sbjct: 586 HNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFK 645
Query: 541 SFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY 589
F L+ +GI HR TCP+TSKQN IVERKHR++++ GL LLS +++PL +
Sbjct: 646 PFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSF 681
BLAST of Lag0017663 vs. NCBI nr
Match:
TYK10642.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])
HSP 1 Score: 606.3 bits (1562), Expect = 2.8e-169
Identity = 331/591 (56.01%), Postives = 412/591 (69.71%), Query Frame = 0
Query: 1 MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQ 60
MSE+IL+QM+HC S K IW L IF++R LAQ M+ K KL I+KG M LKEYF KI Q
Sbjct: 106 MSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQ 165
Query: 61 YVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNE 120
VDAL+++ KPV +DHIL+IL+GLGSDY+SM+SVISA+ SV EVMSLLLTQE++NE
Sbjct: 166 CVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNE 225
Query: 121 SKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTW 180
SKL SETALPSVN+ +ES + N N Y ++ + RG G G SNRG R
Sbjct: 226 SKL-ISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRG-GRGNGRSNRGRR-- 285
Query: 181 NNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLT 240
NRN+ QCQ+C K G++A RC+FRY P +N + +SP H N PQM+AM+
Sbjct: 286 GNRNKPQCQICAKLGYSADRCFFRYT---PRSNSSGYSPNSHNTSYTNMNNHPQMSAMVA 345
Query: 241 APDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP 300
A D+N D++WYPDSGATNHLTHS NLS+G+EYGGGNQ++ NG+GLPI +YG SF+S
Sbjct: 346 ALDLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSS 405
Query: 301 TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLH 360
T + F LNNLL VPSITKNLISVSQFA+DN VFFEFHPTLCYVKD +G+VLLQG L+
Sbjct: 406 TLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLN 465
Query: 361 EGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAI 420
+GLY+F + PS ++ + + + + S T L L++WHRRL HP L I
Sbjct: 466 DGLYKFTIE-PSHKRLHHSNSNTKPVFNTVVPKSNTPL-------LDLWHRRLGHPHLPI 525
Query: 421 VKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPS 480
VK+VL N FC ACALGK H+LPF S T+Y+ PLQLI DLWGPA S
Sbjct: 526 VKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAVNVS 585
Query: 481 VSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFK 540
+G+RYYI+FVD +SRYTWIYFL SKSDA F KFK VE LG SIK+ Q+D G EFK
Sbjct: 586 HNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFK 645
Query: 541 SFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY 589
F L+ +GI HR TCP+TSKQN IVERKHR++++ GL LLS +++PL +
Sbjct: 646 PFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSF 681
BLAST of Lag0017663 vs. NCBI nr
Match:
KZV26181.1 (hypothetical protein F511_06348 [Dorcoceras hygrometricum])
HSP 1 Score: 497.3 bits (1279), Expect = 1.8e-136
Identity = 276/593 (46.54%), Postives = 385/593 (64.92%), Query Frame = 0
Query: 1 MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQ 60
MSE QMI C ++ +W+ + Q+F TR+ A++M+ K +LQT++KG +S+K+Y K++
Sbjct: 33 MSESAQSQMIGCQTSSQLWTRVTQLFATRSKARVMQYKLQLQTLKKGNLSMKDYLGKMKG 92
Query: 61 YVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNE 120
Y+D L+A G + +D IL IL G+G +YES+V +++++ S+ EV +LLL E R E
Sbjct: 93 YIDILAACGNSIPEDDQILHILGGVGPEYESVVVHVTSRVESLSLSEVGALLLAHEGRIE 152
Query: 121 S-KLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGR-T 180
+ ++ TA PSVN+T +P +E+ + Y RGRG GR + RGGR
Sbjct: 153 TYNITGGHTASPSVNVTTAPSQRKAENTSQSQPVY--------RGRGRGR--NGRGGRKP 212
Query: 181 WNNRNRIQCQVCGKFGHTAQRCYFRYAP---PGPSNNPASFSPHFNQSNRPNQFPQMAAM 240
W+N R CQ+CG GH A+ CY+R+ P S + FN+S+ +P A
Sbjct: 213 WHNNGRPVCQICGIPGHVAEICYYRFDKEFVPKSSGVSRTSQQQFNRSS--PSYPPSAFA 272
Query: 241 LTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFS 300
T + + WYPDSGA++H+T+ GNLSV +EY GG++V VGNGAGL I N G S+ +
Sbjct: 273 STKSESASEEWWYPDSGASHHVTNDLGNLSVSSEYTGGSKVQVGNGAGLSISNIGESNLN 332
Query: 301 SPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGT 360
++R F L NLLHVP ITKNLISVS+FA DN V+FEFHP+ C VKD A+ VLL+GT
Sbjct: 333 M-FPSSRPFLLKNLLHVPLITKNLISVSKFAYDNHVYFEFHPSFCLVKDPATHVVLLRGT 392
Query: 361 LHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSL 420
LH GLYRFNL S P+ +Q+ +S + L + + L+ WH RL HPS+
Sbjct: 393 LHNGLYRFNLK-SRISGPLHSPACLQSSVSPIKVPDQSPLCLPQNT-LDKWHLRLGHPSI 452
Query: 421 AIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYI 480
A VK VL ++S N++ FC++C LGK H LPF S T +SAP +++ SDLWGPA+I
Sbjct: 453 ATVKQVLLDCNERISKNDNISFCSSCQLGKNHLLPFPQSTTNFSAPFEVVYSDLWGPAHI 512
Query: 481 PSVSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGE 540
PS +G RYYI+FVD ++RYTWIYFLK KS+ F+ F+ + E IKT Q+D GGE
Sbjct: 513 PSRNGSRYYISFVDAYTRYTWIYFLKLKSEVTQTFINFQKYTELHFNAKIKTLQTDGGGE 572
Query: 541 FKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY 589
F+S ++ S GI HRF+CP+TSKQNG+VERKHRHVVDTGL+LL+H+S+P ++
Sbjct: 573 FRSLTAYCQSNGILHRFSCPYTSKQNGVVERKHRHVVDTGLSLLAHASLPFEF 610
BLAST of Lag0017663 vs. NCBI nr
Match:
RVW60229.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 474.9 bits (1221), Expect = 9.8e-130
Identity = 268/622 (43.09%), Postives = 370/622 (59.49%), Query Frame = 0
Query: 6 LHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDAL 65
L Q++ CSS +W+ + Q F +++ A++M K+++Q ++K G+++++Y +K++ Y D L
Sbjct: 226 LPQVVGCSSAFEVWNTISQNFNSQSSAKVMFYKSQMQMLKKDGLTMRDYLTKMKNYCDLL 285
Query: 66 SAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESKLSS 125
+ G + DHIL I+ GLG +YES+++VIS+K S+ V S L+ E R K+SS
Sbjct: 286 ATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSPSLQYVTSTLIAHEGRIAHKISS 345
Query: 126 SETALPSVNLTVSPKPPDSESPKPNPNPYPSS-------FTGGNRGRGGGRSSSNRGGRT 185
++ SVN T S S N N YPSS F G RG + RG
Sbjct: 346 NDL---SVNYT-SQYSNRGPSSSWNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRGRGRGR 405
Query: 186 WNNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPA------------------SFSPHF 245
+ QCQ+C KFGHT RC++RY P N PA S S
Sbjct: 406 AQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAG 465
Query: 246 N------QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGN 305
N + + +M AM+ P+ + W+PDSGATNH+TH GNL+ G EY G +
Sbjct: 466 NVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNS 525
Query: 306 QVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFE 365
++H+GNG GL I + G S F S + N+V FL N+L VP+I KNL+SVSQFARDN V+FE
Sbjct: 526 KIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLLSVSQFARDNNVYFE 585
Query: 366 FHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSSSTPIKKDTAVQTLLSQSL-- 425
FHP +C+VKD+++ +LLQG LH+GLY+FNLS +S + D T + SL
Sbjct: 586 FHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVH 645
Query: 426 --SSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKT 485
+S + S ++WH+RL HP+ IV VL + S + C+AC LGK+
Sbjct: 646 NDNSDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSACQLGKS 705
Query: 486 HSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDA 545
H+LPF S TVY+ PLQL+VSDLWGPA I S G+ YY++FVD +SRYTW+YFLK+KS
Sbjct: 706 HNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKTKSQT 765
Query: 546 LNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVER 589
FL FK E G +KTFQ+D GGEF+S + GI HR +CPHTSKQNGI+ER
Sbjct: 766 REAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIER 825
BLAST of Lag0017663 vs. NCBI nr
Match:
RVW44519.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])
HSP 1 Score: 448.0 bits (1151), Expect = 1.3e-121
Identity = 255/580 (43.97%), Postives = 342/580 (58.97%), Query Frame = 0
Query: 48 GMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHE 107
G+++++Y +K++ Y D L+ G + DHIL I+ GLG +YES+++VIS+K S+
Sbjct: 132 GLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSPSLQY 191
Query: 108 VMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSS-------FTG 167
V S L+ E R K+SS++ SVN T S S N N YPSS F G
Sbjct: 192 VTSTLIAHEGRIAHKISSNDL---SVNYT-SQYSNRGPSSSWNSNGYPSSGFQNRNQFGG 251
Query: 168 GNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPA------ 227
RG + RG + QCQ+C KFGHT RC++RY P N PA
Sbjct: 252 NQVTRGSFVHNRGRGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPG 311
Query: 228 ------------SFSPHFN------QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNH 287
S S N + + +M AM+ P+ + W+PDSGATNH
Sbjct: 312 VLGSGARNGASGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNH 371
Query: 288 LTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSIT 347
+TH GNL+ G EY G +++H+GNG GL I + G S F S + N+V FL N+L VP+I
Sbjct: 372 VTHDLGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIK 431
Query: 348 KNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSSST 407
KNL+SVSQFARDN V+FEFHP +C+VKD+++ +LLQG LH+GLY+FNLS +S
Sbjct: 432 KNLLSVSQFARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGL 491
Query: 408 PIKKDTAVQTLLSQSL----SSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQ 467
+ D T + SL +S + S ++WH+RL HP+ IV VL +
Sbjct: 492 SLSNDKNELTCCNASLVHNDNSDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIP 551
Query: 468 MSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFV 527
S + C+AC LGK+H+LPF S TVY+ PLQL+VSDLWGPA I S G+ YY++FV
Sbjct: 552 FSTKSGSSICSACQLGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFV 611
Query: 528 DVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGI 587
D +SRYTW+YFLK+KS FL FK E G +KTFQ+D GGEF+S + GI
Sbjct: 612 DAYSRYTWVYFLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGI 671
Query: 588 SHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY 589
HR +CPHTSKQNGI+ERKHRH+V+ GL LL+ +S+PLKY
Sbjct: 672 IHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKY 707
BLAST of Lag0017663 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 282.3 bits (721), Expect = 1.2e-74
Identity = 197/587 (33.56%), Postives = 302/587 (51.45%), Query Frame = 0
Query: 18 IWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPVDVEDH 77
IW L +I+ + + +++T+L+ KG ++ +Y + D L+ +GKP+D ++
Sbjct: 109 IWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQ 168
Query: 78 ILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESKLSSSETALPSVNLTV 137
+ +L L +Y+ ++ I+AK P ++ E+ LL E++ SS T +P V
Sbjct: 169 VERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLLNHESK--ILAVSSATVIPITANAV 228
Query: 138 SPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTW----------NNRNRI-- 197
S + + + N GNR ++N + W NN+++
Sbjct: 229 SHRNTTTTNNNNN----------GNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYL 288
Query: 198 -QCQVCGKFGHTAQRCYFRYAPPGPSNNPASFSPHFNQSNRPNQFP--QMAAMLTAPDIN 257
+CQ+CG GH+A+RC + F N P+ F Q A L
Sbjct: 289 GKCQICGVQGHSAKRC----------SQLQHFLSSVNSQQPPSPFTPWQPRANLALGSPY 348
Query: 258 HDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANR 317
+W DSGAT+H+T F NLS+ Y GG+ V V +G+ +PI + G +S S+ +R
Sbjct: 349 SSNNWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLST---KSR 408
Query: 318 VFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYR 377
L+N+L+VP+I KNLISV + NGV EF P VKD +G LLQG + LY
Sbjct: 409 PLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYE 468
Query: 378 FNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVL 437
+ + +SS P+ SL +SP S + + WH RL HP+ +I+ SV+
Sbjct: 469 WPI---ASSQPV------------SLFASP-----SSKATHSSWHARLGHPAPSILNSVI 528
Query: 438 -RLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGY 497
++ ++ F C+ C + K++ +PF S + PL+ I SD+W + I S Y
Sbjct: 529 SNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHDNY 588
Query: 498 RYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSS 557
RYY+ FVD F+RYTW+Y LK KS F+ FK +EN I TF SD+GGEF +
Sbjct: 589 RYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWE 648
Query: 558 MLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY 589
+ +GISH + PHT + NG+ ERKHRH+V+TGL LLSH+S+P Y
Sbjct: 649 YFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTY 649
BLAST of Lag0017663 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 268.9 bits (686), Expect = 1.4e-70
Identity = 189/530 (35.66%), Postives = 277/530 (52.26%), Query Frame = 0
Query: 63 DALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESK 122
D L+ +GKP+D ++ + +L L DY+ ++ I+AK P S+ E+ L+ +E++ +
Sbjct: 135 DQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLA- 194
Query: 123 LSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTWNNR 182
L+S+E + N+ ++ + + N + N R S+ G R+ N +
Sbjct: 195 LNSAEVVPITANVVTH---RNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQ 254
Query: 183 NRI---QCQVCGKFGHTAQRCYFRYAPPGPSNNPASFSPHFNQSNRPNQFPQMAAMLTAP 242
+ +CQ+C GH+A+RC + +N S SP R N L
Sbjct: 255 PKPYLGRCQICSVQGHSAKRCPQLHQFQSTTNQQQSTSPFTPWQPRAN--------LAVN 314
Query: 243 DINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTC 302
+ +W DSGAT+H+T F NLS Y GG+ V + +G+ +PI + G S S PT
Sbjct: 315 SPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMIADGSTIPITHTG--SASLPT- 374
Query: 303 ANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEG 362
++R LN +L+VP+I KNLISV + N V EF P VKD +G LLQG +
Sbjct: 375 SSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDE 434
Query: 363 LYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAIVK 422
LY + PI AV S+ +SP + WH RL HPSLAI+
Sbjct: 435 LYEW---------PIASSQAV------SMFASPCSKATHSS-----WHSRLGHPSLAILN 494
Query: 423 SVLRLQQ-PQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSV 482
SV+ P ++ ++ C+ C + K+H +PF S S PL+ I SD+W + I S+
Sbjct: 495 SVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVWS-SPILSI 554
Query: 483 SGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKS 542
YRYY+ FVD F+RYTW+Y LK KS + F+ FK VEN I T SD+GGEF
Sbjct: 555 DNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVV 614
Query: 543 FSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY 589
L+ +GISH + PHT + NG+ ERKHRH+V+ GL LLSH+S+P Y
Sbjct: 615 LRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTY 628
BLAST of Lag0017663 vs. ExPASy Swiss-Prot
Match:
P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)
HSP 1 Score: 145.2 bits (365), Expect = 2.3e-33
Identity = 148/613 (24.14%), Postives = 250/613 (40.78%), Query Frame = 0
Query: 1 MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKG-GMSLKEYFSKIQ 60
+S+D+++ +I + + IW+ L ++ ++ L + +K +L + G + + +
Sbjct: 67 LSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLNVFN 126
Query: 61 QYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRN 120
+ L+ +G ++ ED + +L+ L S Y+++ + I + +V S LL E
Sbjct: 127 GLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNEKMR 186
Query: 121 ESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSN--RGGR 180
K P+++ + RGR RSS+N R G
Sbjct: 187 --------------------KKPENQG---------QALITEGRGRSYQRSSNNYGRSGA 246
Query: 181 TWNNRNRIQ-----CQVCGKFGHTAQRCYFRYAPPGPSNNPASFSPHFNQSNRPNQFPQM 240
++NR + C C + GH + C P P S N N
Sbjct: 247 RGKSKNRSKSRVRNCYNCNQPGHFKRDC------PNPRKGKGETSGQKNDDN-------T 306
Query: 241 AAMLTAPD-----INH----------DTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVH 300
AAM+ D IN ++ W D+ A++H T +L G V
Sbjct: 307 AAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHAT-PVRDLFCRYVAGDFGTVK 366
Query: 301 VGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHP 360
+GN + I G T L ++ HVP + NLIS RD +E +
Sbjct: 367 MGNTSYSKIA--GIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDG---YESYF 426
Query: 361 TLCYVKDQASGRVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSV 420
+ V+ +G LYR N + L+++ +SV
Sbjct: 427 ANQKWRLTKGSLVIAKGVARGTLYRTNAEI----------------CQGELNAAQDEISV 486
Query: 421 SGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTV 480
++WH+R+ H S ++ + + + + C C GK H + F S
Sbjct: 487 ------DLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSER 546
Query: 481 YSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHV 540
L L+ SD+ GP I S+ G +Y++TF+D SR W+Y LK+K VF KF V
Sbjct: 547 KLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALV 606
Query: 541 ENLLGLSIKTFQSDSGGEFKS--FSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTG 589
E G +K +SD+GGE+ S F +S+GI H T P T + NG+ ER +R +V+
Sbjct: 607 ERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKV 609
BLAST of Lag0017663 vs. ExPASy Swiss-Prot
Match:
P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)
HSP 1 Score: 80.5 bits (197), Expect = 7.0e-14
Identity = 128/606 (21.12%), Postives = 235/606 (38.78%), Query Frame = 0
Query: 1 MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQ-KGGMSLKEYFSKIQ 60
+S+ L+ + + I L ++ ++LA + ++ +L +++ MSL +F
Sbjct: 63 LSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMSLLSHFHIFD 122
Query: 61 QYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQ-SVHEVMSLLLTQENR 120
+ + L A G ++ D I +L L S Y+ +++ I ++ V + LL QE +
Sbjct: 123 ELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVKNRLLDQEIK 182
Query: 121 NESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRT 180
K ++T+ +N V N N Y ++ R + +
Sbjct: 183 --IKNDHNDTSKKVMNAIV----------HNNNNTYKNNLF-------KNRVTKPKKIFK 242
Query: 181 WNNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPASFSPHFNQSNRPNQFPQMAAMLTA 240
N++ +++C CG+ GH + C F Y NN + Q+ + M +
Sbjct: 243 GNSKYKVKCHHCGREGHIKKDC-FHY--KRILNNKNKENEKQVQTATSHGIAFMVKEVNN 302
Query: 241 PDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPT 300
+ + + DSGA++HL + E + V V + + G +++
Sbjct: 303 TSVMDNCGFVLDSGASDHL--------INDESLYTDSVEVVPPLKIAVAKQGEFIYATKR 362
Query: 301 CANRV-----FFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQ 360
R+ L ++L NL+SV + ++ G+ EF
Sbjct: 363 GIVRLRNDHEITLEDVLFCKEAAGNLMSVKRL-QEAGMSIEF------------------ 422
Query: 361 GTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTV------LSVSGGSDLNVWH 420
S I K+ + S L++ P + ++ ++ +WH
Sbjct: 423 --------------DKSGVTISKNGLMVVKNSGMLNNVPVINFQAYSINAKHKNNFRLWH 482
Query: 421 RRLDHPSLAIVKSVLR--LQQPQMSINN---DFQFCTACALGKTHSLPF--FPSHTVYSA 480
R H S + + R + Q +NN + C C GK LPF T
Sbjct: 483 ERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQARLPFKQLKDKTHIKR 542
Query: 481 PLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENL 540
PL ++ SD+ GP ++ Y++ FVD F+ Y Y +K KSD ++F F E
Sbjct: 543 PLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSDVFSMFQDFVAKSEAH 602
Query: 541 LGLSIKTFQSDSGGEFKS--FSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLAL 585
L + D+G E+ S GIS+ T PHT + NG+ ER R + + +
Sbjct: 603 FNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGVSERMIRTITEKARTM 605
BLAST of Lag0017663 vs. ExPASy Swiss-Prot
Match:
Q07791 (Transposon Ty2-DR3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-DR3 PE=3 SV=1)
HSP 1 Score: 79.0 bits (193), Expect = 2.1e-13
Identity = 75/296 (25.34%), Postives = 128/296 (43.24%), Query Frame = 0
Query: 310 LHVPSITKNLISVSQFARDNGVFFEFHPTLCYVK---DQASGRVLLQGTLHEGLYRFNLS 369
LH P+I +L+S+S+ A N T C+ + +++ G VL H Y +
Sbjct: 513 LHTPNIAYDLLSLSELANQN-------ITACFTRNTLERSDGTVLAPIVKHGDFYWLSKK 572
Query: 370 --VPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLR- 429
+PS I K T S+S++ P L HR L H + ++ L+
Sbjct: 573 YLIPSH---ISKLTINNVNKSKSVNKYPYPLI----------HRMLGHANFRSIQKSLKK 632
Query: 430 -----LQQPQMSINNDFQF-CTACALGK-THSLPFFPSHTVYS---APLQLIVSDLWGPA 489
L++ + +N + C C +GK T S Y P Q + +D++GP
Sbjct: 633 NAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHIKGSRLKYQESYEPFQYLHTDIFGPV 692
Query: 490 YIPSVSGYRYYITFVDVFSRYTWIYFL--KSKSDALNVFLKFKLHVENLLGLSIKTFQSD 549
+ S Y+I+F D +R+ W+Y L + + LNVF ++N + Q D
Sbjct: 693 HHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMD 752
Query: 550 SGGEF--KSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMP 586
G E+ K+ + GI+ +T S+ +G+ ER +R +++ LL S +P
Sbjct: 753 RGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLP 788
BLAST of Lag0017663 vs. ExPASy TrEMBL
Match:
A0A5A7U233 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00060 PE=4 SV=1)
HSP 1 Score: 606.3 bits (1562), Expect = 1.4e-169
Identity = 331/591 (56.01%), Postives = 412/591 (69.71%), Query Frame = 0
Query: 1 MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQ 60
MSE+IL+QM+HC S K IW L IF++R LAQ M+ K KL I+KG M LKEYF KI Q
Sbjct: 106 MSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQ 165
Query: 61 YVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNE 120
VDAL+++ KPV +DHIL+IL+GLGSDY+SM+SVISA+ SV EVMSLLLTQE++NE
Sbjct: 166 CVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNE 225
Query: 121 SKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTW 180
SKL SETALPSVN+ +ES + N N Y ++ + RG G G SNRG R
Sbjct: 226 SKL-ISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRG-GRGNGRSNRGRR-- 285
Query: 181 NNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLT 240
NRN+ QCQ+C K G++A RC+FRY P +N + +SP H N PQM+AM+
Sbjct: 286 GNRNKPQCQICAKLGYSADRCFFRYT---PRSNSSGYSPNSHNTSYTNMNNHPQMSAMVA 345
Query: 241 APDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP 300
A D+N D++WYPDSGATNHLTHS NLS+G+EYGGGNQ++ NG+GLPI +YG SF+S
Sbjct: 346 ALDLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSS 405
Query: 301 TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLH 360
T + F LNNLL VPSITKNLISVSQFA+DN VFFEFHPTLCYVKD +G+VLLQG L+
Sbjct: 406 TLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLN 465
Query: 361 EGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAI 420
+GLY+F + PS ++ + + + + S T L L++WHRRL HP L I
Sbjct: 466 DGLYKFTIE-PSHKRLHHSNSNTKPVFNTVVPKSNTPL-------LDLWHRRLGHPHLPI 525
Query: 421 VKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPS 480
VK+VL N FC ACALGK H+LPF S T+Y+ PLQLI DLWGPA S
Sbjct: 526 VKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAVNVS 585
Query: 481 VSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFK 540
+G+RYYI+FVD +SRYTWIYFL SKSDA F KFK VE LG SIK+ Q+D G EFK
Sbjct: 586 HNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFK 645
Query: 541 SFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY 589
F L+ +GI HR TCP+TSKQN IVERKHR++++ GL LLS +++PL +
Sbjct: 646 PFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSF 681
BLAST of Lag0017663 vs. ExPASy TrEMBL
Match:
A0A5D3CH97 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00040 PE=4 SV=1)
HSP 1 Score: 606.3 bits (1562), Expect = 1.4e-169
Identity = 331/591 (56.01%), Postives = 412/591 (69.71%), Query Frame = 0
Query: 1 MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQ 60
MSE+IL+QM+HC S K IW L IF++R LAQ M+ K KL I+KG M LKEYF KI Q
Sbjct: 106 MSEEILNQMLHCKSAKEIWETLQGIFSSRYLAQAMQFKNKLHNIKKGSMPLKEYFLKILQ 165
Query: 61 YVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNE 120
VDAL+++ KPV +DHIL+IL+GLGSDY+SM+SVISA+ SV EVMSLLLTQE++NE
Sbjct: 166 CVDALASINKPVSSDDHILYILAGLGSDYQSMISVISARTDSPSVQEVMSLLLTQESQNE 225
Query: 121 SKLSSSETALPSVNLTVSPKPPDSES-PKPNPNPYPSSFTGGNRGRGGGRSSSNRGGRTW 180
SKL SETALPSVN+ +ES + N N Y ++ + RG G G SNRG R
Sbjct: 226 SKL-ISETALPSVNIVTQTTEKGAESYIRTNQNNYHNNHSYNQRG-GRGNGRSNRGRR-- 285
Query: 181 NNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPASFSP--HFNQSNRPNQFPQMAAMLT 240
NRN+ QCQ+C K G++A RC+FRY P +N + +SP H N PQM+AM+
Sbjct: 286 GNRNKPQCQICAKLGYSADRCFFRYT---PRSNSSGYSPNSHNTSYTNMNNHPQMSAMVA 345
Query: 241 APDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSP 300
A D+N D++WYPDSGATNHLTHS NLS+G+EYGGGNQ++ NG+GLPI +YG SF+S
Sbjct: 346 ALDLNIDSNWYPDSGATNHLTHSLSNLSIGSEYGGGNQIYAANGSGLPITHYGSMSFNSS 405
Query: 301 TCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLH 360
T + F LNNLL VPSITKNLISVSQFA+DN VFFEFHPTLCYVKD +G+VLLQG L+
Sbjct: 406 TLPFKSFTLNNLLQVPSITKNLISVSQFAKDNHVFFEFHPTLCYVKDLDTGQVLLQGLLN 465
Query: 361 EGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSLAI 420
+GLY+F + PS ++ + + + + S T L L++WHRRL HP L I
Sbjct: 466 DGLYKFTIE-PSHKRLHHSNSNTKPVFNTVVPKSNTPL-------LDLWHRRLGHPHLPI 525
Query: 421 VKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPS 480
VK+VL N FC ACALGK H+LPF S T+Y+ PLQLI DLWGPA S
Sbjct: 526 VKAVLNHIDNSSGTINKLNFCEACALGKHHALPFSHSLTLYTHPLQLITCDLWGPAVNVS 585
Query: 481 VSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFK 540
+G+RYYI+FVD +SRYTWIYFL SKSDA F KFK VE LG SIK+ Q+D G EFK
Sbjct: 586 HNGFRYYISFVDAYSRYTWIYFLNSKSDAFLAFQKFKTCVEKSLGQSIKSLQTDGGTEFK 645
Query: 541 SFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY 589
F L+ +GI HR TCP+TSKQN IVERKHR++++ GL LLS +++PL +
Sbjct: 646 PFKPFLDQHGIEHRITCPYTSKQNDIVERKHRYIMEMGLTLLSQATLPLSF 681
BLAST of Lag0017663 vs. ExPASy TrEMBL
Match:
A0A2Z7AWA7 (Integrase catalytic domain-containing protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_06348 PE=4 SV=1)
HSP 1 Score: 497.3 bits (1279), Expect = 8.9e-137
Identity = 276/593 (46.54%), Postives = 385/593 (64.92%), Query Frame = 0
Query: 1 MSEDILHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQ 60
MSE QMI C ++ +W+ + Q+F TR+ A++M+ K +LQT++KG +S+K+Y K++
Sbjct: 33 MSESAQSQMIGCQTSSQLWTRVTQLFATRSKARVMQYKLQLQTLKKGNLSMKDYLGKMKG 92
Query: 61 YVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNE 120
Y+D L+A G + +D IL IL G+G +YES+V +++++ S+ EV +LLL E R E
Sbjct: 93 YIDILAACGNSIPEDDQILHILGGVGPEYESVVVHVTSRVESLSLSEVGALLLAHEGRIE 152
Query: 121 S-KLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRSSSNRGGR-T 180
+ ++ TA PSVN+T +P +E+ + Y RGRG GR + RGGR
Sbjct: 153 TYNITGGHTASPSVNVTTAPSQRKAENTSQSQPVY--------RGRGRGR--NGRGGRKP 212
Query: 181 WNNRNRIQCQVCGKFGHTAQRCYFRYAP---PGPSNNPASFSPHFNQSNRPNQFPQMAAM 240
W+N R CQ+CG GH A+ CY+R+ P S + FN+S+ +P A
Sbjct: 213 WHNNGRPVCQICGIPGHVAEICYYRFDKEFVPKSSGVSRTSQQQFNRSS--PSYPPSAFA 272
Query: 241 LTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFS 300
T + + WYPDSGA++H+T+ GNLSV +EY GG++V VGNGAGL I N G S+ +
Sbjct: 273 STKSESASEEWWYPDSGASHHVTNDLGNLSVSSEYTGGSKVQVGNGAGLSISNIGESNLN 332
Query: 301 SPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGT 360
++R F L NLLHVP ITKNLISVS+FA DN V+FEFHP+ C VKD A+ VLL+GT
Sbjct: 333 M-FPSSRPFLLKNLLHVPLITKNLISVSKFAYDNHVYFEFHPSFCLVKDPATHVVLLRGT 392
Query: 361 LHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHRRLDHPSL 420
LH GLYRFNL S P+ +Q+ +S + L + + L+ WH RL HPS+
Sbjct: 393 LHNGLYRFNLK-SRISGPLHSPACLQSSVSPIKVPDQSPLCLPQNT-LDKWHLRLGHPSI 452
Query: 421 AIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYI 480
A VK VL ++S N++ FC++C LGK H LPF S T +SAP +++ SDLWGPA+I
Sbjct: 453 ATVKQVLLDCNERISKNDNISFCSSCQLGKNHLLPFPQSTTNFSAPFEVVYSDLWGPAHI 512
Query: 481 PSVSGYRYYITFVDVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGE 540
PS +G RYYI+FVD ++RYTWIYFLK KS+ F+ F+ + E IKT Q+D GGE
Sbjct: 513 PSRNGSRYYISFVDAYTRYTWIYFLKLKSEVTQTFINFQKYTELHFNAKIKTLQTDGGGE 572
Query: 541 FKSFSSMLNSYGISHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY 589
F+S ++ S GI HRF+CP+TSKQNG+VERKHRHVVDTGL+LL+H+S+P ++
Sbjct: 573 FRSLTAYCQSNGILHRFSCPYTSKQNGVVERKHRHVVDTGLSLLAHASLPFEF 610
BLAST of Lag0017663 vs. ExPASy TrEMBL
Match:
A0A438FJP6 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_1134 PE=4 SV=1)
HSP 1 Score: 474.9 bits (1221), Expect = 4.7e-130
Identity = 268/622 (43.09%), Postives = 370/622 (59.49%), Query Frame = 0
Query: 6 LHQMIHCSSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDAL 65
L Q++ CSS +W+ + Q F +++ A++M K+++Q ++K G+++++Y +K++ Y D L
Sbjct: 226 LPQVVGCSSAFEVWNTISQNFNSQSSAKVMFYKSQMQMLKKDGLTMRDYLTKMKNYCDLL 285
Query: 66 SAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESKLSS 125
+ G + DHIL I+ GLG +YES+++VIS+K S+ V S L+ E R K+SS
Sbjct: 286 ATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSPSLQYVTSTLIAHEGRIAHKISS 345
Query: 126 SETALPSVNLTVSPKPPDSESPKPNPNPYPSS-------FTGGNRGRGGGRSSSNRGGRT 185
++ SVN T S S N N YPSS F G RG + RG
Sbjct: 346 NDL---SVNYT-SQYSNRGPSSSWNSNGYPSSGFQNRNQFGGNQVTRGSFVHNRGRGRGR 405
Query: 186 WNNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPA------------------SFSPHF 245
+ QCQ+C KFGHT RC++RY P N PA S S
Sbjct: 406 AQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAG 465
Query: 246 N------QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNHLTHSFGNLSVGTEYGGGN 305
N + + +M AM+ P+ + W+PDSGATNH+TH GNL+ G EY G +
Sbjct: 466 NVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNS 525
Query: 306 QVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSITKNLISVSQFARDNGVFFE 365
++H+GNG GL I + G S F S + N+V FL N+L VP+I KNL+SVSQFARDN V+FE
Sbjct: 526 KIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIKKNLLSVSQFARDNNVYFE 585
Query: 366 FHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSSSTPIKKDTAVQTLLSQSL-- 425
FHP +C+VKD+++ +LLQG LH+GLY+FNLS +S + D T + SL
Sbjct: 586 FHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGLSLSNDKNELTCCNASLVH 645
Query: 426 --SSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKT 485
+S + S ++WH+RL HP+ IV VL + S + C+AC LGK+
Sbjct: 646 NDNSDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIPFSTKSGSSICSACQLGKS 705
Query: 486 HSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFVDVFSRYTWIYFLKSKSDA 545
H+LPF S TVY+ PLQL+VSDLWGPA I S G+ YY++FVD +SRYTW+YFLK+KS
Sbjct: 706 HNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFVDAYSRYTWVYFLKTKSQT 765
Query: 546 LNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGISHRFTCPHTSKQNGIVER 589
FL FK E G +KTFQ+D GGEF+S + GI HR +CPHTSKQNGI+ER
Sbjct: 766 REAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGIIHRLSCPHTSKQNGIIER 825
BLAST of Lag0017663 vs. ExPASy TrEMBL
Match:
A0A438EA49 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2917 PE=4 SV=1)
HSP 1 Score: 448.0 bits (1151), Expect = 6.2e-122
Identity = 255/580 (43.97%), Postives = 342/580 (58.97%), Query Frame = 0
Query: 48 GMSLKEYFSKIQQYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHE 107
G+++++Y +K++ Y D L+ G + DHIL I+ GLG +YES+++VIS+K S+
Sbjct: 132 GLTMRDYLTKMKNYCDLLATAGHKISDTDHILAIMQGLGDEYESVIAVISSKKSSPSLQY 191
Query: 108 VMSLLLTQENRNESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSS-------FTG 167
V S L+ E R K+SS++ SVN T S S N N YPSS F G
Sbjct: 192 VTSTLIAHEGRIAHKISSNDL---SVNYT-SQYSNRGPSSSWNSNGYPSSGFQNRNQFGG 251
Query: 168 GNRGRGGGRSSSNRGGRTWNNRNRIQCQVCGKFGHTAQRCYFRYAPPGPSNNPA------ 227
RG + RG + QCQ+C KFGHT RC++RY P N PA
Sbjct: 252 NQVTRGSFVHNRGRGRGRAQGGIKPQCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPG 311
Query: 228 ------------SFSPHFN------QSNRPNQFPQMAAMLTAPDINHDTSWYPDSGATNH 287
S S N + + +M AM+ P+ + W+PDSGATNH
Sbjct: 312 VLGSGARNGASGSISSAGNVNLTEYDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNH 371
Query: 288 LTHSFGNLSVGTEYGGGNQVHVGNGAGLPILNYGYSSFSSPTCANRVFFLNNLLHVPSIT 347
+TH GNL+ G EY G +++H+GNG GL I + G S F S + N+V FL N+L VP+I
Sbjct: 372 VTHDLGNLNSGAEYNGNSKIHMGNGTGLKISHIGLSVFPSSSSPNKVLFLKNILRVPAIK 431
Query: 348 KNLISVSQFARDNGVFFEFHPTLCYVKDQASGRVLLQGTLHEGLYRFNLSV----PSSST 407
KNL+SVSQFARDN V+FEFHP +C+VKD+++ +LLQG LH+GLY+FNLS +S
Sbjct: 432 KNLLSVSQFARDNNVYFEFHPKVCFVKDKSNHSLLLQGNLHKGLYQFNLSKKLFGKASGL 491
Query: 408 PIKKDTAVQTLLSQSL----SSSPTVLSVSGGSDLNVWHRRLDHPSLAIVKSVLRLQQPQ 467
+ D T + SL +S + S ++WH+RL HP+ IV VL +
Sbjct: 492 SLSNDKNELTCCNASLVHNDNSDFPEKTNSSFHVFDLWHKRLGHPASKIVTQVLNDNKIP 551
Query: 468 MSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSDLWGPAYIPSVSGYRYYITFV 527
S + C+AC LGK+H+LPF S TVY+ PLQL+VSDLWGPA I S G+ YY++FV
Sbjct: 552 FSTKSGSSICSACQLGKSHNLPFPISQTVYTKPLQLVVSDLWGPAPINSSYGFTYYVSFV 611
Query: 528 DVFSRYTWIYFLKSKSDALNVFLKFKLHVENLLGLSIKTFQSDSGGEFKSFSSMLNSYGI 587
D +SRYTW+YFLK+KS FL FK E G +KTFQ+D GGEF+S + GI
Sbjct: 612 DAYSRYTWVYFLKTKSQTREAFLMFKAQAELQFGCKLKTFQTDWGGEFRSLKTYFEQNGI 671
Query: 588 SHRFTCPHTSKQNGIVERKHRHVVDTGLALLSHSSMPLKY 589
HR +CPHTSKQNGI+ERKHRH+V+ GL LL+ +S+PLKY
Sbjct: 672 IHRLSCPHTSKQNGIIERKHRHIVELGLTLLAQASLPLKY 707
BLAST of Lag0017663 vs. TAIR 10
Match:
AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 59.3 bits (142), Expect = 1.2e-08
Identity = 55/191 (28.80%), Postives = 93/191 (48.69%), Query Frame = 0
Query: 1 MSEDILHQMIHCSST-KAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQ 60
+++ +L +I T + +W L +F A+ ++ + +L+T +S+ EY K++
Sbjct: 82 ITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTTIDDLSVHEYCQKLK 141
Query: 61 QYVDALSAVGKPVDVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENR- 120
D L+ V P+ ++ +L+GL Y+ +++VI K S E S+LL +E+R
Sbjct: 142 SLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSFTEARSMLLMEESRL 201
Query: 121 -NESKLSSSETALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRS-SSNRGG 180
N+SK S S T PS++ + P E YP + N G GRS NRGG
Sbjct: 202 SNKSKSSLSHTNHPSLSNVLFTVPRQQER-------YPQEYHNNNSNMGRGRSKKKNRGG 261
Query: 181 RT----WNNRN 184
+ +NN N
Sbjct: 262 GSSDGRYNNNN 265
BLAST of Lag0017663 vs. TAIR 10
Match:
ATMG00300.1 (Gag-Pol-related retrotransposon family protein )
HSP 1 Score: 52.8 bits (125), Expect = 1.1e-06
Identity = 32/128 (25.00%), Postives = 53/128 (41.41%), Query Frame = 0
Query: 349 RVLLQGTLHEGLYRFNLSVPSSSTPIKKDTAVQTLLSQSLSSSPTVLSVSGGSDLNVWHR 408
R +L+G H+ LY +L S+ + + L+ + + +WH
Sbjct: 36 RTILKGNRHDSLY---------------------ILQGSVETGESNLAETAKDETRLWHS 95
Query: 409 RLDHPSLAIVKSVLRLQQPQMSINNDFQFCTACALGKTHSLPFFPSHTVYSAPLQLIVSD 468
RL H S ++ +++ S + +FC C GKTH + F PL + SD
Sbjct: 96 RLAHMSQRGMELLVKKGFLDSSKVSSLKFCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSD 142
Query: 469 LWGPAYIP 477
LWG +P
Sbjct: 156 LWGAPSVP 142
BLAST of Lag0017663 vs. TAIR 10
Match:
AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 45.4 bits (106), Expect = 1.8e-04
Identity = 46/184 (25.00%), Postives = 91/184 (49.46%), Query Frame = 0
Query: 13 SSTKAIWSCLGQIFTTRNLAQMMKIKTKLQTIQKGGMSLKEYFSKIQQYVDALSAVGKPV 72
S+++ IW + F A+ +++ ++L+T G M + +Y+ K+++ D+L V PV
Sbjct: 93 STSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDMRVADYYRKMKKLADSLRNVDVPV 152
Query: 73 DVEDHILFILSGLGSDYESMVSVISAKIGPQSVHEVMSLLLTQENRNESKLSSSET---- 132
+ ++++L+GL ++++++VI + S + ++L +E+R + + + T
Sbjct: 153 TDRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAATMLQEEEDRLKRAIKPNPTHVDH 212
Query: 133 ALPSVNLTVSPKPPDSESPKPNPNPYPSSFTGGNRGRGGGRS-SSNRGGR-------TWN 185
+ S L S PP + + N G RGRG G + RGGR T+N
Sbjct: 213 SSSSTVLACSEAPPVTNFQRSGGNQM------GYRGRGRGNNIFRGRGGRFSYYNMPTFN 270
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAA0048297.1 | 2.8e-169 | 56.01 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
TYK10642.1 | 2.8e-169 | 56.01 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m... | [more] |
KZV26181.1 | 1.8e-136 | 46.54 | hypothetical protein F511_06348 [Dorcoceras hygrometricum] | [more] |
RVW60229.1 | 9.8e-130 | 43.09 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
RVW44519.1 | 1.3e-121 | 43.97 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera] | [more] |
Match Name | E-value | Identity | Description | |
Q94HW2 | 1.2e-74 | 33.56 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.4e-70 | 35.66 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
P10978 | 2.3e-33 | 24.14 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... | [more] |
P04146 | 7.0e-14 | 21.12 | Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3 | [more] |
Q07791 | 2.1e-13 | 25.34 | Transposon Ty2-DR3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC ... | [more] |
Match Name | E-value | Identity | Description | |
A0A5A7U233 | 1.4e-169 | 56.01 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A5D3CH97 | 1.4e-169 | 56.01 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var.... | [more] |
A0A2Z7AWA7 | 8.9e-137 | 46.54 | Integrase catalytic domain-containing protein OS=Dorcoceras hygrometricum OX=472... | [more] |
A0A438FJP6 | 4.7e-130 | 43.09 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
A0A438EA49 | 6.2e-122 | 43.97 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... | [more] |
Match Name | E-value | Identity | Description | |
AT5G48050.1 | 1.2e-08 | 28.80 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |
ATMG00300.1 | 1.1e-06 | 25.00 | Gag-Pol-related retrotransposon family protein | [more] |
AT1G34070.1 | 1.8e-04 | 25.00 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |