Lag0017648 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCAGAACACAGAGGGTGTGTAAGGGGAGTGGGTGTGTTCGTAACGCTCTCTGTGTACTACAATGTTGCTAAAGAGAATTCGAAGTTGAGTCAGAAACCACAAAGCAAAGGTTCGAGTGTCAAGACCGAAGCCCCTCGACGAAAGCAATCTTCGAACAAAGAAAATAGTGTCACACATAAAAAGTCAAAGGGAAAAGATGTACGTGAGAAACCTGAGAATTTGGAGGTAAATTATTATTATGTTTGTTGGAATTTTGTATATATATACTTAGCTTTGATGTTTTAAACTTTTGTAGGGTGGAACACCTTACCATCTAGCAATAGGCTCTATGGATAACATTGTTAAGAATATACGAGTCGCCTCCACAAAATGCAACCATTCATGGAGTTCCATTAGGAGTCGGAAATGTTCGAGTTGTGGTGGACATGGTCATAGGTGA ATGCCAGAACACAGAGGGTGTGTAAGGGGAGTGGGTGTGTTCGTAACGCTCTCTGTGTACTACAATGTTGCTAAAGAGAATTCGAAGTTGAGTCAGAAACCACAAAGCAAAGGTTCGAGTGTCAAGACCGAAGCCCCTCGACGAAAGCAATCTTCGAACAAAGAAAATAGTGTCACACATAAAAAGTCAAAGGGAAAAGATGTACGTGAGAAACCTGAGAATTTGGAGGGTGGAACACCTTACCATCTAGCAATAGGCTCTATGGATAACATTGTTAAGAATATACGAGTCGCCTCCACAAAATGCAACCATTCATGGAGTTCCATTAGGAGTCGGAAATGTTCGAGTTGTGGTGGACATGGTCATAGGTGA ATGCCAGAACACAGAGGGTGTGTAAGGGGAGTGGGTGTGTTCGTAACGCTCTCTGTGTACTACAATGTTGCTAAAGAGAATTCGAAGTTGAGTCAGAAACCACAAAGCAAAGGTTCGAGTGTCAAGACCGAAGCCCCTCGACGAAAGCAATCTTCGAACAAAGAAAATAGTGTCACACATAAAAAGTCAAAGGGAAAAGATGTACGTGAGAAACCTGAGAATTTGGAGGGTGGAACACCTTACCATCTAGCAATAGGCTCTATGGATAACATTGTTAAGAATATACGAGTCGCCTCCACAAAATGCAACCATTCATGGAGTTCCATTAGGAGTCGGAAATGTTCGAGTTGTGGTGGACATGGTCATAGGTGA MPEHRGCVRGVGVFVTLSVYYNVAKENSKLSQKPQSKGSSVKTEAPRRKQSSNKENSVTHKKSKGKDVREKPENLEGGTPYHLAIGSMDNIVKNIRVASTKCNHSWSSIRSRKCSSCGGHGHR Homology
BLAST of Lag0017648 vs. NCBI nr
Match: XP_008451868.1 (PREDICTED: uncharacterized protein LOC103493028 isoform X1 [Cucumis melo] >XP_008451869.1 PREDICTED: uncharacterized protein LOC103493028 isoform X1 [Cucumis melo] >XP_016901189.1 PREDICTED: uncharacterized protein LOC103493028 isoform X1 [Cucumis melo] >KAA0040180.1 uncharacterized protein E6C27_scaffold118G00160 [Cucumis melo var. makuwa] >TYK16450.1 uncharacterized protein E5676_scaffold21G002480 [Cucumis melo var. makuwa]) HSP 1 Score: 68.9 bits (167), Expect = 3.4e-08 Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 0
BLAST of Lag0017648 vs. NCBI nr
Match: XP_016901190.1 (PREDICTED: uncharacterized protein LOC103493028 isoform X2 [Cucumis melo]) HSP 1 Score: 68.9 bits (167), Expect = 3.4e-08 Identity = 49/131 (37.40%), Postives = 68/131 (51.91%), Query Frame = 0
BLAST of Lag0017648 vs. NCBI nr
Match: KAE8649224.1 (hypothetical protein Csa_014966 [Cucumis sativus]) HSP 1 Score: 62.4 bits (150), Expect = 3.2e-06 Identity = 45/131 (34.35%), Postives = 64/131 (48.85%), Query Frame = 0
BLAST of Lag0017648 vs. NCBI nr
Match: XP_031740251.1 (uncharacterized protein LOC101213947 [Cucumis sativus]) HSP 1 Score: 62.4 bits (150), Expect = 3.2e-06 Identity = 45/131 (34.35%), Postives = 64/131 (48.85%), Query Frame = 0
BLAST of Lag0017648 vs. NCBI nr
Match: XP_038895921.1 (uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_038895924.1 uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida] >XP_038895927.1 uncharacterized protein LOC120084092 isoform X1 [Benincasa hispida]) HSP 1 Score: 62.0 bits (149), Expect = 4.1e-06 Identity = 46/116 (39.66%), Postives = 60/116 (51.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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