Lag0017450 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGACTCCAACAAATCAATCCAACACAAGCATAATTTCAAACAGCAGAGATCAAAAGTCGAAGAAGCACTCACCGAAACTCACTCAGGCATTTCGTCGAACGTCTTCTCGGCACGCACCAGCGCCGAATCGAAACATGAATCGATCTCACCGATTCCGCCTCAGATCAACAACAACAAACATCAAGAGGATTACGAACCTCAAATTCTCTGCTGCGGATGCGATCGGCCGATGATGTTGATCGGAGTGGAGAACTCGACTCTGTGCTACATTTGCAAGGCGACGCCATCGACGTACGTGTGTGCGCCATGTTCGAGCGGATTGATTAACTTTTTCGACAGAGGATGTGCGGAAATGCCGAGAGAGATCGATTATCCGTATCACCACCACGCTCTGAGGCTGAGATATCGAAGAAGTTCTTACTGCTCCGCCTGTCTCCGGCGATCCGACGGCTTCAATTTTGGTTGCGAGAAATGTAAGTTCATTGTCGATGTTAAATGTGCTCTCAGATAA ATGGACTCCAACAAATCAATCCAACACAAGCATAATTTCAAACAGCAGAGATCAAAAGTCGAAGAAGCACTCACCGAAACTCACTCAGGCATTTCGTCGAACGTCTTCTCGGCACGCACCAGCGCCGAATCGAAACATGAATCGATCTCACCGATTCCGCCTCAGATCAACAACAACAAACATCAAGAGGATTACGAACCTCAAATTCTCTGCTGCGGATGCGATCGGCCGATGATGTTGATCGGAGTGGAGAACTCGACTCTGTGCTACATTTGCAAGGCGACGCCATCGACGTACGTGTGTGCGCCATGTTCGAGCGGATTGATTAACTTTTTCGACAGAGGATGTGCGGAAATGCCGAGAGAGATCGATTATCCGTATCACCACCACGCTCTGAGGCTGAGATATCGAAGAAGTTCTTACTGCTCCGCCTGTCTCCGGCGATCCGACGGCTTCAATTTTGGTTGCGAGAAATGTAAGTTCATTGTCGATGTTAAATGTGCTCTCAGATAA ATGGACTCCAACAAATCAATCCAACACAAGCATAATTTCAAACAGCAGAGATCAAAAGTCGAAGAAGCACTCACCGAAACTCACTCAGGCATTTCGTCGAACGTCTTCTCGGCACGCACCAGCGCCGAATCGAAACATGAATCGATCTCACCGATTCCGCCTCAGATCAACAACAACAAACATCAAGAGGATTACGAACCTCAAATTCTCTGCTGCGGATGCGATCGGCCGATGATGTTGATCGGAGTGGAGAACTCGACTCTGTGCTACATTTGCAAGGCGACGCCATCGACGTACGTGTGTGCGCCATGTTCGAGCGGATTGATTAACTTTTTCGACAGAGGATGTGCGGAAATGCCGAGAGAGATCGATTATCCGTATCACCACCACGCTCTGAGGCTGAGATATCGAAGAAGTTCTTACTGCTCCGCCTGTCTCCGGCGATCCGACGGCTTCAATTTTGGTTGCGAGAAATGTAAGTTCATTGTCGATGTTAAATGTGCTCTCAGATAA MDSNKSIQHKHNFKQQRSKVEEALTETHSGISSNVFSARTSAESKHESISPIPPQINNNKHQEDYEPQILCCGCDRPMMLIGVENSTLCYICKATPSTYVCAPCSSGLINFFDRGCAEMPREIDYPYHHHALRLRYRRSSYCSACLRRSDGFNFGCEKCKFIVDVKCALR Homology
BLAST of Lag0017450 vs. NCBI nr
Match: KAG6579395.1 (hypothetical protein SDJN03_23843, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 142.9 bits (359), Expect = 2.5e-30 Identity = 72/169 (42.60%), Postives = 95/169 (56.21%), Query Frame = 0
BLAST of Lag0017450 vs. NCBI nr
Match: XP_028056396.1 (uncharacterized protein LOC114260456 [Camellia sinensis] >THG20191.1 hypothetical protein TEA_005576 [Camellia sinensis var. sinensis]) HSP 1 Score: 72.4 bits (176), Expect = 4.2e-09 Identity = 48/127 (37.80%), Postives = 63/127 (49.61%), Query Frame = 0
BLAST of Lag0017450 vs. NCBI nr
Match: XP_035551576.1 (uncharacterized protein LOC109008056 [Juglans regia] >KAF5454028.1 hypothetical protein F2P56_023726 [Juglans regia]) HSP 1 Score: 69.3 bits (168), Expect = 3.6e-08 Identity = 33/91 (36.26%), Postives = 46/91 (50.55%), Query Frame = 0
BLAST of Lag0017450 vs. NCBI nr
Match: XP_028056383.1 (uncharacterized protein LOC114260454 isoform X1 [Camellia sinensis] >XP_028056384.1 uncharacterized protein LOC114260454 isoform X1 [Camellia sinensis] >XP_028056386.1 uncharacterized protein LOC114260454 isoform X2 [Camellia sinensis] >XP_028056387.1 uncharacterized protein LOC114260454 isoform X1 [Camellia sinensis] >XP_028056388.1 uncharacterized protein LOC114260454 isoform X1 [Camellia sinensis] >XP_028056389.1 uncharacterized protein LOC114260454 isoform X3 [Camellia sinensis] >XP_028056390.1 uncharacterized protein LOC114260454 isoform X1 [Camellia sinensis] >XP_028056391.1 uncharacterized protein LOC114260454 isoform X1 [Camellia sinensis] >XP_028056392.1 uncharacterized protein LOC114260454 isoform X1 [Camellia sinensis] >XP_028056393.1 uncharacterized protein LOC114260454 isoform X1 [Camellia sinensis]) HSP 1 Score: 68.6 bits (166), Expect = 6.1e-08 Identity = 42/120 (35.00%), Postives = 56/120 (46.67%), Query Frame = 0
BLAST of Lag0017450 vs. NCBI nr
Match: THG20173.1 (hypothetical protein TEA_005558 [Camellia sinensis var. sinensis]) HSP 1 Score: 68.6 bits (166), Expect = 6.1e-08 Identity = 42/120 (35.00%), Postives = 56/120 (46.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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