Lag0017373 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0017373
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr5: 2887870 .. 2888779 (-)
RNA-Seq ExpressionLag0017373
SyntenyLag0017373
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATTTATGAGGAAGCTTCTGGACAAGTCATCAATTTGGCGAAGTCGACAATGTATTTCTATCCCAATGTTAGTACTACGGACCACACAACTCTCAAAGGGATCTTGGGGATGCAAATTGTTGACTCATTGGGAACGTACTTGGGCGTTCCATCATCATTCACTCGAAATCGAAGGGACGACTTTCGAGGGGTTAAACAACGTGTTTGGCAAACGCTACAGGGTTGGAAGGGGAGATTTTTCTCAATGGGAGGGAAGGAGGTTCTAATAAAGAGTGTAGCTCAAGCTATACCCATGTTCATTATGAGTTGTTTCCGACTTCCTAGTACTCTTTTGTGATGATATTAACAGAATGATAGCTCGGTTTTGGTGGGGTTCCACAGAGACAAAAAGGAAAATTCACTGGAAGAAATGAGATTTCTTATGTGCGCCAAAAGAGGTAGGAGGTTTGAATTTCCGAGATTTGGGGAATTTTAATAAGGCTTTGTTAGCAAAACATGTGTGGCGTTTATTTTCTCAGCCAAGTTTATTGGTTTCGAGGATTGTTCGTGGCAGGTATGCTCATGACACCTCCTTATTAAAAGCTCATATCAAATCCAAGTGTTCTTTCTTTTGGTGGAGCTGCGTTTGGGCTCGTAGTCTATTATTACAGGGTATGCGTAAACAGGTTGGAACAAGAGAATGCATTAATTTTTTCAAAGATCCTTGGATTCCTACGGAATCCACTTTTAAGCCAATTCCAAATATCGTCGTGCATGATTATCAAGATTCTGTGGTAGCGGATTTCATTACTCCGACAAAAGGGTGGGATATTGACAAACTAGGTGAATTTGTTTCCGTCGAGGAAGTCAAGATCACATCTGCTATTCCCATAAGCTCGGTCAATGCAGAAGATAAATGGATATGA

mRNA sequence

ATGAAAATTTATGAGGAAGCTTCTGGACAAGTCATCAATTTGGCGAAGTCGACAATGTATTTCTATCCCAATGTTAGTACTACGGACCACACAACTCTCAAAGGGATCTTGGGGATGCAAATTGTTGACTCATTGGGAACGTACTTGGGCGTTCCATCATCATTCACTCGAAATCGAAGGGACGACTTTCGAGGGGTTAAACAACGTGTTTGGCAAACGCTACAGGGTTGGAAGGGGAGATTTTTCTCAATGGGAGGGAAGGAGAATGATAGCTCGGTTTTGGTGGGGTTCCACAGAGACAAAAAGGAAAATTCACTGGAAGAAATGAGATTTCTTATGTGCGCCAAAAGAGGTAGGAGGTATGCTCATGACACCTCCTTATTAAAAGCTCATATCAAATCCAAGTGTTCTTTCTTTTGGTGGAGCTGCGTTTGGGCTCGTAGTCTATTATTACAGGGTATGCGTAAACAGGTTGGAACAAGAGAATGCATTAATTTTTTCAAAGATCCTTGGATTCCTACGGAATCCACTTTTAAGCCAATTCCAAATATCGTCGTGCATGATTATCAAGATTCTGTGGTAGCGGATTTCATTACTCCGACAAAAGGGTGGGATATTGACAAACTAGGTGAATTTGTTTCCGTCGAGGAAGTCAAGATCACATCTGCTATTCCCATAAGCTCGGTCAATGCAGAAGATAAATGGATATGA

Coding sequence (CDS)

ATGAAAATTTATGAGGAAGCTTCTGGACAAGTCATCAATTTGGCGAAGTCGACAATGTATTTCTATCCCAATGTTAGTACTACGGACCACACAACTCTCAAAGGGATCTTGGGGATGCAAATTGTTGACTCATTGGGAACGTACTTGGGCGTTCCATCATCATTCACTCGAAATCGAAGGGACGACTTTCGAGGGGTTAAACAACGTGTTTGGCAAACGCTACAGGGTTGGAAGGGGAGATTTTTCTCAATGGGAGGGAAGGAGAATGATAGCTCGGTTTTGGTGGGGTTCCACAGAGACAAAAAGGAAAATTCACTGGAAGAAATGAGATTTCTTATGTGCGCCAAAAGAGGTAGGAGGTATGCTCATGACACCTCCTTATTAAAAGCTCATATCAAATCCAAGTGTTCTTTCTTTTGGTGGAGCTGCGTTTGGGCTCGTAGTCTATTATTACAGGGTATGCGTAAACAGGTTGGAACAAGAGAATGCATTAATTTTTTCAAAGATCCTTGGATTCCTACGGAATCCACTTTTAAGCCAATTCCAAATATCGTCGTGCATGATTATCAAGATTCTGTGGTAGCGGATTTCATTACTCCGACAAAAGGGTGGGATATTGACAAACTAGGTGAATTTGTTTCCGTCGAGGAAGTCAAGATCACATCTGCTATTCCCATAAGCTCGGTCAATGCAGAAGATAAATGGATATGA

Protein sequence

MKIYEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRRDDFRGVKQRVWQTLQGWKGRFFSMGGKENDSSVLVGFHRDKKENSLEEMRFLMCAKRGRRYAHDTSLLKAHIKSKCSFFWWSCVWARSLLLQGMRKQVGTRECINFFKDPWIPTESTFKPIPNIVVHDYQDSVVADFITPTKGWDIDKLGEFVSVEEVKITSAIPISSVNAEDKWI
Homology
BLAST of Lag0017373 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 134.8 bits (338), Expect = 9.6e-28
Identity = 85/238 (35.71%), Postives = 119/238 (50.00%), Query Frame = 0

Query: 4    YEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRRDDF 63
            Y  ASGQ IN +KS + F PNV       L+ IL +++V   G YLG+PS FTR RR + 
Sbjct: 868  YGRASGQCINFSKSALLFSPNVHPERQQYLQCILNVKLVSHFGNYLGLPSHFTR-RRGES 927

Query: 64   RGVKQRVWQTLQGWKGRFFSMGG-----KENDSSVLVGFHRDKKENSLEEMRFLMCAKRG 123
            R +    W  +   K      GG      E  +  LV  H       L+    L+     
Sbjct: 928  RKLHWMKWGRMCYPK----ECGGLNFRDLEGFNQALVAKH---VWRFLQHPNLLVSKVLK 987

Query: 124  RRYAHDTSLLKAHIKSKCSFFWWSCVWARSLLLQGMRKQVGTRECINFFKDPWIPTESTF 183
             +Y  DTSLL+A   SK S+FW   +W R LL++G+R +VG    I  F DPW+P  +TF
Sbjct: 988  HKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTF 1047

Query: 184  KPIPNIVVHDYQDSVVADFITPTKGWDIDKLGEFVSVEEVKITSAIPISSVNAEDKWI 237
            KP+     +   D+ VA FIT    WD+  +      E+  +  ++PISS N +D W+
Sbjct: 1048 KPLR--FNNGALDTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWL 1095

BLAST of Lag0017373 vs. NCBI nr
Match: XP_030487384.1 (uncharacterized protein LOC115704310 [Cannabis sativa])

HSP 1 Score: 123.2 bits (308), Expect = 2.9e-24
Identity = 80/261 (30.65%), Postives = 120/261 (45.98%), Query Frame = 0

Query: 4   YEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRRDDF 63
           Y  ASGQ++N  KS M F  NVS+T  T L  ++G+++VD+ G YLG+PS   R ++  F
Sbjct: 401 YSIASGQLVNFHKSEMCFGRNVSSTVKTQLATLMGVKVVDNYGKYLGLPSFVGRTKKQHF 460

Query: 64  RGVKQRVWQTLQGWKGRFFSMGGKENDSSVLVG---------FHRDKKE-NSLEEM---- 123
             +K RVW  L+GWKG FFS   KE     +V          F   KK  NS+  M    
Sbjct: 461 EFIKNRVWNKLKGWKGSFFSAARKEVLIKAIVQAIPTYTMSCFRLPKKTINSIHSMAARF 520

Query: 124 -----------RFLMCAKRGRRYAHDTSLLKAHIKSKCSFFWWSCVWARSLLLQGMRKQV 183
                       +  C      Y   + +L+A   +  SF W S VW + ++ +G R ++
Sbjct: 521 WWGSSEKDAKIHWCKCKVLKASYYPYSGVLEAKCGNHASFVWRSLVWGKKIIQKGHRWRI 580

Query: 184 GTRECINFFKDPWIPTESTFK-----PIPNIVVHDYQDSVVADFITPTKGWDIDKLGEFV 235
           G R  +   +D W+P   TFK     P+P+          V D   P   WD + +    
Sbjct: 581 GNRNSVRVLEDSWLPRPITFKIYDKPPLPD-------QLYVIDLKEPHGAWDKEFVRAVF 640

BLAST of Lag0017373 vs. NCBI nr
Match: XP_030500352.1 (uncharacterized protein LOC115715819 [Cannabis sativa])

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-23
Identity = 81/259 (31.27%), Postives = 118/259 (45.56%), Query Frame = 0

Query: 1   MKIYEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRR 60
           +  Y +ASGQV+NL KS M F PN +          L M I +    YLG+PS F R+++
Sbjct: 108 LDFYHKASGQVLNLDKSVMSFSPNTTLAAQVFFHRPLNMPICECHERYLGLPSYFGRDKK 167

Query: 61  DDFRGVKQRVWQTLQGWKGRFFSMGG-----KENDSSVLVGFHRDKKEN----------- 120
             F  +K+++W+ +  W   FF  GG     K    S++  F     EN           
Sbjct: 168 RMFSDIKEKIWRLMHTWSENFFLAGGRKCFLKRQLESMMANFWWGLNENGNKIHWRSWKL 227

Query: 121 ---------SLEEMRFLMCAK-RGRRYAHDTSLLKAHIKSKCSFFWWSCVWARSLLLQGM 180
                    SLE+    + AK    RY  + + L+A+I    SF W    W RSL + G+
Sbjct: 228 LCKRKDSGASLEKQPDSLLAKVLKSRYYPNNNFLQANIGHSPSFTWQGIHWGRSLFVAGL 287

Query: 181 RKQVGTRECINFFKDPWIPTESTFKPIPNIVVHDYQDSVVADFITPTKGWDIDKLGEFVS 234
           R ++G    IN   DPWIP  STF+P          D+ V++ I   + WD+  L ++ S
Sbjct: 288 RWKIGEGCRINCADDPWIPRHSTFRPYH---FSGPPDTTVSNLIADERQWDLALLNQWFS 347

BLAST of Lag0017373 vs. NCBI nr
Match: XP_030479133.1 (uncharacterized protein LOC115696372 [Cannabis sativa])

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-22
Identity = 89/303 (29.37%), Postives = 128/303 (42.24%), Query Frame = 0

Query: 1   MKIYEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRR 60
           + IY  ASGQ +N  KS M F PN       + + ILGM I +    YLG+P+   R++ 
Sbjct: 667 LDIYHRASGQRLNADKSVMSFSPNTPIAVQNSFQQILGMPICECHEAYLGLPAYSERDKS 726

Query: 61  DDFRGVKQRVWQTLQGWKGRFFSMGGKE-------------------------NDSSVLV 120
             F  +K+++W+ +  W  + FS+GGKE                         N+   ++
Sbjct: 727 QLFSNIKEKIWKLMHAWNDKIFSIGGKEVLLKAVVQSIPTYAMSCFRLPVKLCNEIEAMM 786

Query: 121 -----GFHRDKKENSLEEMRFLMCAKRG------RRYAH----------------DTSL- 180
                G   D K+   ++ RFL C  +G      R + H                 TSL 
Sbjct: 787 AKFWWGSSSDNKKIHWKKWRFL-CKSKGDGGMGFRSFVHFNQALLAKQAWRIFQDPTSLL 846

Query: 181 ---LKAHIKSKCSFF-----------WWSCVWARSLLLQGMRKQVGTRECINFFKDPWIP 237
              LK H  S+  F            W   VW R LL++G+R +VGT   I    D WIP
Sbjct: 847 SRVLKGHYFSQNDFMTARGGGLSSLTWQGIVWGRELLVKGLRLKVGTGNNIRCAVDSWIP 906

BLAST of Lag0017373 vs. NCBI nr
Match: XP_016446893.1 (PREDICTED: uncharacterized protein LOC107771940, partial [Nicotiana tabacum])

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-22
Identity = 73/239 (30.54%), Postives = 123/239 (51.46%), Query Frame = 0

Query: 1   MKIYEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRR 60
           ++ YE++S QV+NL KS + F  NV   +   +  +LG Q  + +G YL +P+   R+++
Sbjct: 6   LRKYEQSSSQVVNLDKSAICFSRNVMEGEKVEIFSLLGQQQRNEMGMYLELPAIVGRSKK 65

Query: 61  DDFRGVKQRVWQTLQGWKGRFFSMGGKENDSSVLVGFHRDKKENSLEEMRFLMCAK-RGR 120
                +K RV   ++GWKG+F S  GKE    +  G   DK++  +E+   L  +K RG 
Sbjct: 66  KMLEFIKDRVKTKIKGWKGKFLSTAGKE--VMLKSGQTEDKRKMQIEKWEILCDSKSRGG 125

Query: 121 RYAHDTSLLKAHI---KSKCSFFWWSCVWARSLLLQGMRKQVGTRECINFFKDPWIPTES 180
               D       +   +++ S+ W S +W R LL+ G+R ++   + IN + +PWIP ++
Sbjct: 126 LGFRDLKAFNMALLAKQARRSWIWRSILWGRDLLVTGLRWRISDGKNINVWPNPWIPRKN 185

Query: 181 TFKPIPNIVVHDYQDSVVADFI-TPTKGWDIDKLGEFVSVEEVKITSAIPISSVNAEDK 235
            F P  +I + +  D  V D I   T  W + K+      E+V    +IPIS +   D+
Sbjct: 186 GFTP-KSIQMQNNLDLKVVDLIDEDTHTWKLHKISTTFEPEDVDAILSIPISIIGLNDR 241

BLAST of Lag0017373 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 4.7e-28
Identity = 85/238 (35.71%), Postives = 119/238 (50.00%), Query Frame = 0

Query: 4    YEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRRDDF 63
            Y  ASGQ IN +KS + F PNV       L+ IL +++V   G YLG+PS FTR RR + 
Sbjct: 868  YGRASGQCINFSKSALLFSPNVHPERQQYLQCILNVKLVSHFGNYLGLPSHFTR-RRGES 927

Query: 64   RGVKQRVWQTLQGWKGRFFSMGG-----KENDSSVLVGFHRDKKENSLEEMRFLMCAKRG 123
            R +    W  +   K      GG      E  +  LV  H       L+    L+     
Sbjct: 928  RKLHWMKWGRMCYPK----ECGGLNFRDLEGFNQALVAKH---VWRFLQHPNLLVSKVLK 987

Query: 124  RRYAHDTSLLKAHIKSKCSFFWWSCVWARSLLLQGMRKQVGTRECINFFKDPWIPTESTF 183
             +Y  DTSLL+A   SK S+FW   +W R LL++G+R +VG    I  F DPW+P  +TF
Sbjct: 988  HKYFKDTSLLQASNNSKSSYFWKGFLWGRDLLVKGLRLRVGNGSTIKAFSDPWLPRPTTF 1047

Query: 184  KPIPNIVVHDYQDSVVADFITPTKGWDIDKLGEFVSVEEVKITSAIPISSVNAEDKWI 237
            KP+     +   D+ VA FIT    WD+  +      E+  +  ++PISS N +D W+
Sbjct: 1048 KPLR--FNNGALDTTVASFITADGNWDVTSISHSFCNEDRDLILSMPISSYNLQDSWL 1095

BLAST of Lag0017373 vs. ExPASy TrEMBL
Match: A0A803NG99 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 8.0e-28
Identity = 86/267 (32.21%), Postives = 120/267 (44.94%), Query Frame = 0

Query: 1   MKIYEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRR 60
           + IY  ASGQ++N  KS M F PN +     +   ILGM I D    YLG+P+   +N+ 
Sbjct: 628 LDIYHRASGQLLNEDKSVMSFSPNTTDEVKHSFVQILGMPISDCHEKYLGLPAYSEQNKS 687

Query: 61  DDFRGVKQRVWQTLQGWKGRFFSMGGKENDSSVLV------------------------- 120
             F  +K R+W+ L  W  + FS+GGKE     +V                         
Sbjct: 688 QLFADIKDRIWKMLHAWNDKLFSIGGKEVLLKAVVQSIPTYAMSCFKLSTKFCKEIDTMM 747

Query: 121 -----GFHRDKKENSLEEMRFLMCAK-RGRRYAHDTSLLKAHIKSKCSFFWWSCVWARSL 180
                G   DKK    ++ +FL  +K  G     D   L A      S  W    W + L
Sbjct: 748 AQFWWGTTYDKKRTHWKKWKFLCTSKMEGGSVLSDIRFLSASSAGVSSMTWQGICWGKDL 807

Query: 181 LLQGMRKQVGTRECINFFKDPWIPTESTFKPIPNIVVHDYQDSVVADFITPTKGWDIDKL 237
           L+QG+R QVG+   I    DPWIP ++ F P+       + DS VAD+ITP K WD+ +L
Sbjct: 808 LIQGLRLQVGSGLSIRTATDPWIPAQNRFTPVR---FTGFADSCVADYITPNKVWDVTQL 867

BLAST of Lag0017373 vs. ExPASy TrEMBL
Match: A0A803QE56 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 4.8e-25
Identity = 77/241 (31.95%), Postives = 112/241 (46.47%), Query Frame = 0

Query: 4    YEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRRDDF 63
            Y +ASGQ++N +KS + F   V       +  +LGM+IVD+ G YLG+PS   RN++  F
Sbjct: 938  YSKASGQMVNFSKSEVCFGRTVQADLKMDIAELLGMKIVDNHGKYLGLPSFVGRNKKQLF 997

Query: 64   RGVKQRVWQTLQGWKGRFFSMGGKENDSSVLVG---------FHRDKKE-NSLEEMRFLM 123
              +K RVW  L+GWKG  FSM GKE     +V          F   K   N++  M    
Sbjct: 998  DVIKNRVWNKLRGWKGSMFSMAGKEVLIKAIVQAIPTYTMSCFRLTKSTINNIHRMAARF 1057

Query: 124  CAKRGRRYAHDTSLLKAHIKSKCSFFWWSCVWARSLLLQGMRKQVGTRECINFFKDPWIP 183
            C      Y  +  +L A   +  SF W S  W + ++L G R ++G   C+   +DPW+P
Sbjct: 1058 CRVLKASYYPNGDVLHAKCGTHASFVWRSLYWGKKVILGGYRWRIGNGNCVRIMEDPWLP 1117

Query: 184  TESTFKPIPNIVVHDYQDSVVADFITPTKGWDIDKLGEFVSVEEVKITSAIPISSVNAED 235
                FK      V       V D   P   WD + +    + E+  I   +P +  + ED
Sbjct: 1118 RPRHFKIYDKPCVPG--GLYVVDLKRPNGCWDEEFVRVVFNEEDADIILKLPSTGWDIED 1176

BLAST of Lag0017373 vs. ExPASy TrEMBL
Match: A0A803QCG6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24
Identity = 86/260 (33.08%), Postives = 121/260 (46.54%), Query Frame = 0

Query: 1    MKIYEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRR 60
            + IY  ASGQV+N  KSTM F PN            L M I +    YLG+PS   R+++
Sbjct: 1126 LDIYHRASGQVLNNNKSTMSFSPNTPMAAQHFFAQTLNMPITECHERYLGLPSYSGRDKQ 1185

Query: 61   DDFRGVKQRVWQTLQGWKGRFFSMGGKENDSSVLVG---------FHRDKKE-NSLEEM- 120
            + F  +K++VW+ L  W  + FS GGKE     +V          F   KK  N LE M 
Sbjct: 1186 ELFSNIKEKVWKLLYAWNEQIFSAGGKEVLLKAVVQSIPTYAMSCFKLTKKFCNQLESMM 1245

Query: 121  -RFLMCAKRG------------RRYAHDTSLLKAHIKSKCSFFWWSCVWARSLLLQGMRK 180
              F     +              RY   TS L A+I    S+ W S  W R LL++GMR 
Sbjct: 1246 ANFWWGTNQNGTKIHWKSRLLKHRYFSTTSFLDANIGHSPSYTWQSICWGRELLVKGMRF 1305

Query: 181  QVGTRECINFFKDPWIPTESTFKPIPNIVVHDYQDSVVADFITPTKGWDIDKLGEFVSVE 237
            +VG    I+   DPWIP+ + FKPI     +   +  V+  IT  + W+++ L  F    
Sbjct: 1306 KVGNGHHISCGTDPWIPSHTNFKPIS---YNGPPNMSVSSLITEQRVWNLEMLNSFFQPI 1365

BLAST of Lag0017373 vs. ExPASy TrEMBL
Match: A0A803P9C5 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 1.4e-24
Identity = 80/266 (30.08%), Postives = 120/266 (45.11%), Query Frame = 0

Query: 1    MKIYEEASGQVINLAKSTMYFYPNVSTTDHTTLKGILGMQIVDSLGTYLGVPSSFTRNRR 60
            + IY  ASGQ +N  KS M F PN   +   + + ILGM I +   +YLG+P+   R++ 
Sbjct: 1088 LDIYHRASGQQLNADKSVMSFSPNTPESVQNSFQQILGMPICECHESYLGLPAYSERDKS 1147

Query: 61   DDFRGVKQRVWQTLQGWKGRFFSMGGKENDSSVLV------------------------- 120
              F  +K+++W+ +  W  + FS+GGKE     +V                         
Sbjct: 1148 QLFSNIKEKIWKLMHAWNDKIFSIGGKEVLLKAVVQSIPTYAMSCFRLSAKFCKEIEAMM 1207

Query: 121  -----GFHRDKKENSLEEMRFLMCAKRGRRYAHDTSLLKAHIKSKCSFFWWSCVWARSLL 180
                 G   D KE   ++ RFL C  +G           A      S  W   VW R LL
Sbjct: 1208 ARFWWGSTSDNKEIHWKKWRFL-CKSKGS---------GATGGGLSSITWQGIVWGRELL 1267

Query: 181  LQGMRKQVGTRECINFFKDPWIPTESTFKPIPNIVVHDYQDSVVADFITPTKGWDIDKLG 237
             +G+R +VGT   I+   D WIP   +FKP      H    +VVAD+I+  + W+++ L 
Sbjct: 1268 AKGLRLKVGTGSSISCVDDSWIPGHKSFKPYCYTGDH---SNVVADYISSNREWNLELLN 1327

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158377.19.6e-2835.71uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_030487384.12.9e-2430.65uncharacterized protein LOC115704310 [Cannabis sativa][more]
XP_030500352.12.5e-2331.27uncharacterized protein LOC115715819 [Cannabis sativa][more]
XP_030479133.11.2e-2229.37uncharacterized protein LOC115696372 [Cannabis sativa][more]
XP_016446893.13.5e-2230.54PREDICTED: uncharacterized protein LOC107771940, partial [Nicotiana tabacum][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DX304.7e-2835.71uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A803NG998.0e-2832.21Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QE564.8e-2531.95Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803QCG61.4e-2433.08Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803P9C51.4e-2430.08Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 2..88
NoneNo IPR availablePANTHERPTHR33116:SF45SUBFAMILY NOT NAMEDcoord: 123..234
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 123..234
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 2..88

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0017373.1Lag0017373.1mRNA