Lag0016384 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0016384
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr12: 37052489 .. 37053184 (+)
RNA-Seq ExpressionLag0016384
SyntenyLag0016384
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGCTGGAGCTCCGATCTCTCGCGGGATTCTGGTTTTAGTCTATACTTTGCCGAGGCTGCGATTCTGAAACTGTAACGTACCACTAGAATGAAGTGAACTTTGCTGCTCTGATCATGGAAGAGGATTGCACATTATAGACTTGTTTTTGGCAGTGATCAGTTTCAACCCAATCGATTTCTTGGATTACAAGGGATTTTCGATACTGTTTCAGGTGTTTGATTTCTAATTAGGGACTTCTGTTGGTTTAAAGAGGAGCTAATAATTCGTCCAAGAGGAATATCAACGTTGAATCATTGACATTTTTCACGAACTGATCAGGAGAGCTAATTTCTGCCGAATTTGTTGCTTAGGAGTTCTTTTTATCTGCGTTTCCGTTGATTTTGTCCTTTCGTATTTAGGTTTTCTCTGATATTCGGGAACTGGGTTAGAATTCATTTTGTCCAGTGGAGAGTTGGGTCTTAATAATTTTTTTTGAGAATTTTGGAAATTTCTCTTGGCCTGTGCTTATTATTCCTGTACTCGTGTTTATAAGTGGGAAGAATTCTCTAAGGCTTGGGACTTGCATCTGTGGGATTGACTAAAGAAGCACATGGAGGAATATTGAAGCTGGAAATGAATGCGAGGACATGGTGCATGGACAGCAGCTTAGTTTCTTGTTCGTTCCCTTTTCGGAACAGTGCTTCTGGAAAGTAG

mRNA sequence

ATGGGCTGGAGCTCCGATCTCTCGCGGGATTCTGGTTTTAGTCTATACTTTGCCGAGGCTGCGATTCTGAAACTTGATCAGTTTCAACCCAATCGATTTCTTGGATTACAAGGGATTTTCGATACTGTTTCAGGCTTGGGACTTGCATCTGTGGGATTGACTAAAGAAGCACATGGAGGAATATTGAAGCTGGAAATGAATGCGAGGACATGGTGCATGGACAGCAGCTTAGTTTCTTGTTCGTTCCCTTTTCGGAACAGTGCTTCTGGAAAGTAG

Coding sequence (CDS)

ATGGGCTGGAGCTCCGATCTCTCGCGGGATTCTGGTTTTAGTCTATACTTTGCCGAGGCTGCGATTCTGAAACTTGATCAGTTTCAACCCAATCGATTTCTTGGATTACAAGGGATTTTCGATACTGTTTCAGGCTTGGGACTTGCATCTGTGGGATTGACTAAAGAAGCACATGGAGGAATATTGAAGCTGGAAATGAATGCGAGGACATGGTGCATGGACAGCAGCTTAGTTTCTTGTTCGTTCCCTTTTCGGAACAGTGCTTCTGGAAAGTAG

Protein sequence

MGWSSDLSRDSGFSLYFAEAAILKLDQFQPNRFLGLQGIFDTVSGLGLASVGLTKEAHGGILKLEMNARTWCMDSSLVSCSFPFRNSASGK
Homology
[Close]
BLAST of Lag0016384 vs. NCBI nr
Match: RYR23577.1 (hypothetical protein Ahy_B03g068779 isoform C [Arachis hypogaea])

HSP 1 Score: 53.9 bits (128), Expect = 8.3e-04
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 51 VGLTKEAHGGILKLEMNARTWCMDSSLVSCSFPFRNSASG 91
          V   +E +GGILKLEM+  TWCMD S+V+ SFPF N A+G
Sbjct: 54 VSSEQEVYGGILKLEMSVMTWCMDRSIVAVSFPFWNIAAG 93

[Close]
BLAST of Lag0016384 vs. NCBI nr
Match: RYR23576.1 (hypothetical protein Ahy_B03g068779 isoform D [Arachis hypogaea])

HSP 1 Score: 53.9 bits (128), Expect = 8.3e-04
Identity = 24/40 (60.00%), Postives = 30/40 (75.00%), Query Frame = 0 

Query: 51  VGLTKEAHGGILKLEMNARTWCMDSSLVSCSFPFRNSASG 91
           V   +E +GGILKLEM+  TWCMD S+V+ SFPF N A+G
Sbjct: 65  VSSEQEVYGGILKLEMSVMTWCMDRSIVAVSFPFWNIAAG 104

The following BLAST results are available for this feature:
BLAST of Lag0016384 vs. NCBI nr
Match NameE-valueIdentityDescription
RYR23577.18.3e-0460.00hypothetical protein Ahy_B03g068779 isoform C [Arachis hypogaea][more]
RYR23576.18.3e-0460.00hypothetical protein Ahy_B03g068779 isoform D [Arachis hypogaea][more]
BLAST of Lag0016384 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0016384.1Lag0016384.1mRNA